| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is 221229819
Identifier: 221229819
GI number: 221229819
Start: 925690
End: 926172
Strand: Direct
Name: 221229819
Synonym: MLBr_00781
Alternate gene names: NA
Gene position: 925690-926172 (Clockwise)
Preceding gene: 221229818
Following gene: 221229820
Centisome position: 28.33
GC content: 62.53
Gene sequence:
>483_bases ATGGACGTCAAGGAGGTGCTGTTGCCCGGGGTGGGCTTGCGGTACGAGTTCACCAGTCGCAAGGGTGATCGGATCGGGAT CATCGCGCGGCGCAGCGGCGATTTCGATGTCGTCGTATATGCTCGCGACGATCCGGACTGGGCTCAGCCGGTCTTCTGCC TCACTGACGACGAGGCCGAAGCTGTCGCTCAGATTCTGGGCGCACCCAGGATTGCCGAGCGGTTCACTGAGCTGGCTAGT GAAGTTCCCGGGCTCGAAACCAGGCAAGTTCGCATCGCACCGGAGAGCTTGTTCGTCGATCGTCCTCTGGGCGACACCCA CGCCCGTACTCGTACCGGCGCATCGATCGTCGCGATCGTGCGCGACGAGGACGTCGTGGTTTCGCCAGGCCCGGCTGAAC CGCTGCGGGCACGAGATGTGTTGATCGTGATAGGTACCGAAGAAGGTATCGCCGGGGTCGAGCAGATCATCGACAAGGGC TGA
Upstream 100 bases:
>100_bases ACTACAGTTCCGTTGACTCGCTAACGTTAGTTCCGCTGGGCTATAAGAGTATTGCCGTGGTCACTTCTTTCTCGGCGGCA TTTCGTTAAGGATTGAGGCT
Downstream 100 bases:
>100_bases GGAGATGGAAATTTCGGGGGCGCTGCTGTCCCAAGTCGGCGCCCTCTTGACCACACTTGCTGTGCTGGGCGCCGGCGCAC GCCGGTACTCTTTGTCTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: TrkA-C Domain Protein; TrkA Domain-Containing Protein; TrkA-C; Potassium-Efflux System Protein YhaT; Potassium/Proton Antiporter Regulatory Subunit Cpa2 Family; TrkA-C Domain Containing Protein; TrkA-Like Protein
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MDVKEVLLPGVGLRYEFTSRKGDRIGIIARRSGDFDVVVYARDDPDWAQPVFCLTDDEAEAVAQILGAPRIAERFTELAS EVPGLETRQVRIAPESLFVDRPLGDTHARTRTGASIVAIVRDEDVVVSPGPAEPLRARDVLIVIGTEEGIAGVEQIIDKG
Sequences:
>Translated_160_residues MDVKEVLLPGVGLRYEFTSRKGDRIGIIARRSGDFDVVVYARDDPDWAQPVFCLTDDEAEAVAQILGAPRIAERFTELAS EVPGLETRQVRIAPESLFVDRPLGDTHARTRTGASIVAIVRDEDVVVSPGPAEPLRARDVLIVIGTEEGIAGVEQIIDKG >Mature_160_residues MDVKEVLLPGVGLRYEFTSRKGDRIGIIARRSGDFDVVVYARDDPDWAQPVFCLTDDEAEAVAQILGAPRIAERFTELAS EVPGLETRQVRIAPESLFVDRPLGDTHARTRTGASIVAIVRDEDVVVSPGPAEPLRARDVLIVIGTEEGIAGVEQIIDKG
Specific function: Unknown
COG id: COG0490
COG function: function code P; Putative regulatory, ligand-binding protein related to C-terminal domains of K+ channels
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17406; Mature: 17406
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVKEVLLPGVGLRYEFTSRKGDRIGIIARRSGDFDVVVYARDDPDWAQPVFCLTDDEAE CCHHHHHCCCCCEEEEECCCCCCEEEEEEECCCCEEEEEEECCCCCCCCEEEEEECCHHH AVAQILGAPRIAERFTELASEVPGLETRQVRIAPESLFVDRPLGDTHARTRTGASIVAIV HHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECHHHEEEECCCCCCCCCCCCCCEEEEEE RDEDVVVSPGPAEPLRARDVLIVIGTEEGIAGVEQIIDKG ECCCEEECCCCCCCCCCCEEEEEEECCCCHHHHHHHHHCC >Mature Secondary Structure MDVKEVLLPGVGLRYEFTSRKGDRIGIIARRSGDFDVVVYARDDPDWAQPVFCLTDDEAE CCHHHHHCCCCCEEEEECCCCCCEEEEEEECCCCEEEEEEECCCCCCCCEEEEEECCHHH AVAQILGAPRIAERFTELASEVPGLETRQVRIAPESLFVDRPLGDTHARTRTGASIVAIV HHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECHHHEEEECCCCCCCCCCCCCCEEEEEE RDEDVVVSPGPAEPLRARDVLIVIGTEEGIAGVEQIIDKG ECCCEEECCCCCCCCCCCEEEEEEECCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA