| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is manA [H]
Identifier: 221229809
GI number: 221229809
Start: 907192
End: 908424
Strand: Direct
Name: manA [H]
Synonym: MLBr_00765
Alternate gene names: 221229809
Gene position: 907192-908424 (Clockwise)
Preceding gene: 221229808
Following gene: 221229810
Centisome position: 27.76
GC content: 61.8
Gene sequence:
>1233_bases GTGGAACTGCTACGCGGAGCGTTGCGGACATATGCGTGGGGATCGCGGACCGCTATCGCCGAATTCACTGGAAGACCTGT GCCGGCTGCTCACCCTGAAGCTGAGCTCTGGTTCGGTGCGCACCCCGGTGACTCGGTTTGGCTACAAGCAGCGAACGGCG AAACTTCGCTACTGGAGGCTCTGGTCGCTGATCCGGAAGGGCAGCTTGGCTCAGTGTCCCGCGCTCGATTTGGTGACGTG CTGCCGTTCCTGGTCAAGGTGCTGGCAGCTGACGAACCGCTGTCGCTGCAGGCCCATCCGAGCACCAAGCAGGCGGTCGA GGGTTACCTGCGCGAAGAACGTCTGGGCATTCCGGTGTCCTCGCCGGAACGTAACTACCGGGATACCAGTCACAAGCCGG AGTTATTGGTGGCGCTGCAGTCATTCGAGGCGTTGGCTGGATTTCGTCAGTCGTCACGCACTGCTGAGCTACTGACGGCG TTAGCCGTCTCCGACCTCGACCCTTTCATTCATTTGCTGAGCGACCAGTCCGACGCCGACGGTCTGCGTGCGCTGTTCAC TACCTGGATAACCGCGCCCCAGACCGACATCGACATGCTGGTACCTGCCGTGCTGGAGGGGGCGATCGCCTACGTCAGTT CCGGAGCGACGGAGTTCCTGGCGGAAGTCAAGACGGTGATGGAACTTGGCGAGCGTTATCCCGGCGACGCCGGCGTGCTG GCATCGTTGTTGCTTAACCGCATCAGCCTCACTCCCGGCGAGGCTATCTTCTTGCCGGCCGGCAACTTGCATGCCTATTT GCGAGGTGTTGGGGTGGAGGTGATGGCTAACTCCGACAACGTGTTGCGAGGAGGCCTCACCCCCAAGCATGTCGATGTGC CTGAGCTGTTGCGGGTGCTGGATTTCAACCCAACTCCCGAGGAGGCGCTGCGCCCGCCGACCCGCTGCGAGGGTTTTGCG GTGGTTTACGAGACCCCGACCGATGAGTTCGAGGTAGCGCTATTGGCGCTCGACGGCGATTATCTGGGTCACGAGGTCGA TGCGTCACCCCACGATGTGTCGCAAGGCCCACAGATCTTGTTGTGCACCGAGGGTGAAATTACGGTGCACGGCAAGTTCC AGGCACTCACCGTAGAACGCGGTATGGCTGTCTGGATGGCGGCCGACGACGGCCCGATTCGGCTGGTCGCGCAGCAACCC GCCAAGCTGTTCAGGGCAACCGTCGGTTTGTGA
Upstream 100 bases:
>100_bases TCGGGTGGCGCCGATCGCGCTGAGCAAGAGCTGGCAATGTTAGCTGTTCGGCTTGAAATGGCCGCGGTTTATTTGCGATT GGTACGGGGATAGATAGACA
Downstream 100 bases:
>100_bases CGGCTTGCCTTCGCTCACGTAGCTACAACCGGAGTGTGTGAGCGCTGGTGCGACATTTATTTTATTTCGACCGGGCGGAC CTAAGTACAGGCTGTCAAGA
Product: putative mannose-6-phosphate isomerase
Products: NA
Alternate protein names: Phosphohexomutase; Phosphomannose isomerase; PMI [H]
Number of amino acids: Translated: 410; Mature: 410
Protein sequence:
>410_residues MELLRGALRTYAWGSRTAIAEFTGRPVPAAHPEAELWFGAHPGDSVWLQAANGETSLLEALVADPEGQLGSVSRARFGDV LPFLVKVLAADEPLSLQAHPSTKQAVEGYLREERLGIPVSSPERNYRDTSHKPELLVALQSFEALAGFRQSSRTAELLTA LAVSDLDPFIHLLSDQSDADGLRALFTTWITAPQTDIDMLVPAVLEGAIAYVSSGATEFLAEVKTVMELGERYPGDAGVL ASLLLNRISLTPGEAIFLPAGNLHAYLRGVGVEVMANSDNVLRGGLTPKHVDVPELLRVLDFNPTPEEALRPPTRCEGFA VVYETPTDEFEVALLALDGDYLGHEVDASPHDVSQGPQILLCTEGEITVHGKFQALTVERGMAVWMAADDGPIRLVAQQP AKLFRATVGL
Sequences:
>Translated_410_residues MELLRGALRTYAWGSRTAIAEFTGRPVPAAHPEAELWFGAHPGDSVWLQAANGETSLLEALVADPEGQLGSVSRARFGDV LPFLVKVLAADEPLSLQAHPSTKQAVEGYLREERLGIPVSSPERNYRDTSHKPELLVALQSFEALAGFRQSSRTAELLTA LAVSDLDPFIHLLSDQSDADGLRALFTTWITAPQTDIDMLVPAVLEGAIAYVSSGATEFLAEVKTVMELGERYPGDAGVL ASLLLNRISLTPGEAIFLPAGNLHAYLRGVGVEVMANSDNVLRGGLTPKHVDVPELLRVLDFNPTPEEALRPPTRCEGFA VVYETPTDEFEVALLALDGDYLGHEVDASPHDVSQGPQILLCTEGEITVHGKFQALTVERGMAVWMAADDGPIRLVAQQP AKLFRATVGL >Mature_410_residues MELLRGALRTYAWGSRTAIAEFTGRPVPAAHPEAELWFGAHPGDSVWLQAANGETSLLEALVADPEGQLGSVSRARFGDV LPFLVKVLAADEPLSLQAHPSTKQAVEGYLREERLGIPVSSPERNYRDTSHKPELLVALQSFEALAGFRQSSRTAELLTA LAVSDLDPFIHLLSDQSDADGLRALFTTWITAPQTDIDMLVPAVLEGAIAYVSSGATEFLAEVKTVMELGERYPGDAGVL ASLLLNRISLTPGEAIFLPAGNLHAYLRGVGVEVMANSDNVLRGGLTPKHVDVPELLRVLDFNPTPEEALRPPTRCEGFA VVYETPTDEFEVALLALDGDYLGHEVDASPHDVSQGPQILLCTEGEITVHGKFQALTVERGMAVWMAADDGPIRLVAQQP AKLFRATVGL
Specific function: Involved in the conversion of glucose to GDP-L-fucose, which can be converted to L-fucose, a capsular polysaccharide [H]
COG id: COG1482
COG function: function code G; Phosphomannose isomerase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannose-6-phosphate isomerase type 1 family [H]
Homologues:
Organism=Homo sapiens, GI4505235, Length=440, Percent_Identity=30.6818181818182, Blast_Score=173, Evalue=3e-43, Organism=Escherichia coli, GI1787899, Length=395, Percent_Identity=38.7341772151899, Blast_Score=251, Evalue=5e-68, Organism=Caenorhabditis elegans, GI71997620, Length=320, Percent_Identity=33.75, Blast_Score=144, Evalue=8e-35, Organism=Caenorhabditis elegans, GI17557650, Length=346, Percent_Identity=28.0346820809249, Blast_Score=128, Evalue=4e-30, Organism=Saccharomyces cerevisiae, GI6320839, Length=446, Percent_Identity=30.0448430493274, Blast_Score=155, Evalue=1e-38, Organism=Drosophila melanogaster, GI21356061, Length=406, Percent_Identity=29.5566502463054, Blast_Score=139, Evalue=4e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR001250 - InterPro: IPR016305 - InterPro: IPR018050 - InterPro: IPR014710 [H]
Pfam domain/function: PF01238 PMI_typeI [H]
EC number: =5.3.1.8 [H]
Molecular weight: Translated: 44156; Mature: 44156
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELLRGALRTYAWGSRTAIAEFTGRPVPAAHPEAELWFGAHPGDSVWLQAANGETSLLEA CHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCHHHHHH LVADPEGQLGSVSRARFGDVLPFLVKVLAADEPLSLQAHPSTKQAVEGYLREERLGIPVS HHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCCCC SPERNYRDTSHKPELLVALQSFEALAGFRQSSRTAELLTALAVSDLDPFIHLLSDQSDAD CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCH GLRALFTTWITAPQTDIDMLVPAVLEGAIAYVSSGATEFLAEVKTVMELGERYPGDAGVL HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHH ASLLLNRISLTPGEAIFLPAGNLHAYLRGVGVEVMANSDNVLRGGLTPKHVDVPELLRVL HHHHHHHHCCCCCCEEEEECCCHHHHHHCCCEEEEECCCCEEECCCCCCCCCHHHHHHHH DFNPTPEEALRPPTRCEGFAVVYETPTDEFEVALLALDGDYLGHEVDASPHDVSQGPQIL CCCCCCHHHCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEE LCTEGEITVHGKFQALTVERGMAVWMAADDGPIRLVAQQPAKLFRATVGL EEECCCEEEECEEEEEEEECCEEEEEECCCCCEEEEEHHHHHHHHHHCCC >Mature Secondary Structure MELLRGALRTYAWGSRTAIAEFTGRPVPAAHPEAELWFGAHPGDSVWLQAANGETSLLEA CHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCHHHHHH LVADPEGQLGSVSRARFGDVLPFLVKVLAADEPLSLQAHPSTKQAVEGYLREERLGIPVS HHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCCCC SPERNYRDTSHKPELLVALQSFEALAGFRQSSRTAELLTALAVSDLDPFIHLLSDQSDAD CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCH GLRALFTTWITAPQTDIDMLVPAVLEGAIAYVSSGATEFLAEVKTVMELGERYPGDAGVL HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHH ASLLLNRISLTPGEAIFLPAGNLHAYLRGVGVEVMANSDNVLRGGLTPKHVDVPELLRVL HHHHHHHHCCCCCCEEEEECCCHHHHHHCCCEEEEECCCCEEECCCCCCCCCHHHHHHHH DFNPTPEEALRPPTRCEGFAVVYETPTDEFEVALLALDGDYLGHEVDASPHDVSQGPQIL CCCCCCHHHCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEE LCTEGEITVHGKFQALTVERGMAVWMAADDGPIRLVAQQPAKLFRATVGL EEECCCEEEECEEEEEEEECCEEEEEECCCCCEEEEEHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1879695; 11677609 [H]