| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is pgl
Identifier: 221229706
GI number: 221229706
Start: 703251
End: 703994
Strand: Reverse
Name: pgl
Synonym: MLBr_00579
Alternate gene names: 221229706
Gene position: 703994-703251 (Counterclockwise)
Preceding gene: 221229707
Following gene: 221229696
Centisome position: 21.54
GC content: 58.2
Gene sequence:
>744_bases GTGAGCGCCAGTGTAGAGATCTTTTCAGACAGCAAGACCATGGTCGGAGCCGCCGGAAAACGACTTGCCAGCACCATCCA ATCCGCCGTGGCTGCCAGAGAAAGGGCACTGATTGTGCTGACCGGTGGTAGCAGCGGCATTGGACTACTGCGGGATTTAG CTACACGTGGACAGCAGATCGATTGGTCTAGGGTGCATCTATTCTGGGGCGACGAGCGCTACGTACCCAAAGACGACGAC GAGCGCAACGAGAAACAGGCACGTGTAGCGTTGCTCGATCACATAGACATCCCGCCCAGCCAGGTGCACCCGATGCCTGC GGGCGACGGTGAATTCGGCAACGATCTAGAAGCAGCGGCACTAGCTTACGAACAGCTGCTGGCTGCCTACGCCGCACCCG GTTATCCCACCCCGAATTTTGATGTGCACCTGATGGGCATGGGACCCGAAGGACACATCAATTCGCTGTTCCCAAATACC GTAGCTGTGCGCGAGACCAGTCGTATGGTGGTCGGAGTCAGGAACTCTCCAAAACCACCTCCAGAACGAATCACCTTGAC ACTTAATGCCATTCAACGTTCTCGTGAGGTATGGCTGATGGTTTCCGGGACGGCAAAGGCCGACGCAGTGGCAGCCGCCA TGGGTGGCGCTCCCTCTGCCTCAATACCGGCCGCCGGAGCTGTCGGGCTTGAAACCACACTCTGGCTGCTGGACGAAGAA GCCGCAGCCAAGATTCCTGGCTAG
Upstream 100 bases:
>100_bases GCAGGGAAGCCGAGGAGTTCCTAGCCGAAAATCTGCGACGACTGGATCCCGACAAGTTCTACTTCAATGCCTTCGAAGGC ATTGAAAAGGTTCAGTACCT
Downstream 100 bases:
>100_bases TGGCGTCATAATGACCTTCATGGCTGACAGAACCGTGCGCAGCAGACTGGAGCGAAGGCGATTATCTACAGAGATGATGC TGTCGCGGTTATCAGCCACC
Product: putative 6-phosphogluconolactonase
Products: NA
Alternate protein names: 6PGL
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MSASVEIFSDSKTMVGAAGKRLASTIQSAVAARERALIVLTGGSSGIGLLRDLATRGQQIDWSRVHLFWGDERYVPKDDD ERNEKQARVALLDHIDIPPSQVHPMPAGDGEFGNDLEAAALAYEQLLAAYAAPGYPTPNFDVHLMGMGPEGHINSLFPNT VAVRETSRMVVGVRNSPKPPPERITLTLNAIQRSREVWLMVSGTAKADAVAAAMGGAPSASIPAAGAVGLETTLWLLDEE AAAKIPG
Sequences:
>Translated_247_residues MSASVEIFSDSKTMVGAAGKRLASTIQSAVAARERALIVLTGGSSGIGLLRDLATRGQQIDWSRVHLFWGDERYVPKDDD ERNEKQARVALLDHIDIPPSQVHPMPAGDGEFGNDLEAAALAYEQLLAAYAAPGYPTPNFDVHLMGMGPEGHINSLFPNT VAVRETSRMVVGVRNSPKPPPERITLTLNAIQRSREVWLMVSGTAKADAVAAAMGGAPSASIPAAGAVGLETTLWLLDEE AAAKIPG >Mature_246_residues SASVEIFSDSKTMVGAAGKRLASTIQSAVAARERALIVLTGGSSGIGLLRDLATRGQQIDWSRVHLFWGDERYVPKDDDE RNEKQARVALLDHIDIPPSQVHPMPAGDGEFGNDLEAAALAYEQLLAAYAAPGYPTPNFDVHLMGMGPEGHINSLFPNTV AVRETSRMVVGVRNSPKPPPERITLTLNAIQRSREVWLMVSGTAKADAVAAAMGGAPSASIPAAGAVGLETTLWLLDEEA AAKIPG
Specific function: Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate
COG id: COG0363
COG function: function code G; 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily
Homologues:
Organism=Homo sapiens, GI6912586, Length=243, Percent_Identity=32.9218106995885, Blast_Score=101, Evalue=8e-22, Organism=Homo sapiens, GI52145310, Length=239, Percent_Identity=29.7071129707113, Blast_Score=101, Evalue=8e-22, Organism=Caenorhabditis elegans, GI115533058, Length=255, Percent_Identity=27.843137254902, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI115533060, Length=255, Percent_Identity=27.843137254902, Blast_Score=89, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6321687, Length=260, Percent_Identity=31.1538461538462, Blast_Score=100, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6324362, Length=215, Percent_Identity=33.0232558139535, Blast_Score=96, Evalue=6e-21, Organism=Saccharomyces cerevisiae, GI6321957, Length=256, Percent_Identity=26.5625, Blast_Score=94, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6319918, Length=219, Percent_Identity=32.8767123287671, Blast_Score=92, Evalue=9e-20, Organism=Drosophila melanogaster, GI24641119, Length=202, Percent_Identity=36.1386138613861, Blast_Score=107, Evalue=7e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): 6PGL_MYCLE (Q49700)
Other databases:
- EMBL: U00013 - EMBL: AL583919 - PIR: S72775 - RefSeq: NP_301491.1 - ProteinModelPortal: Q49700 - SMR: Q49700 - EnsemblBacteria: EBMYCT00000027976 - GeneID: 910133 - GenomeReviews: AL450380_GR - KEGG: mle:ML0579 - NMPDR: fig|272631.1.peg.363 - Leproma: ML0579 - GeneTree: EBGT00050000017647 - HOGENOM: HBG725991 - OMA: PAICLTG - ProtClustDB: CLSK791167 - BioCyc: MLEP272631:ML0579-MONOMER - BRENDA: 3.1.1.31 - InterPro: IPR005900 - InterPro: IPR006148 - PANTHER: PTHR11054 - TIGRFAMs: TIGR01198
Pfam domain/function: PF01182 Glucosamine_iso
EC number: =3.1.1.31
Molecular weight: Translated: 26161; Mature: 26030
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASVEIFSDSKTMVGAAGKRLASTIQSAVAARERALIVLTGGSSGIGLLRDLATRGQQI CCCEEEEECCCCEEHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHCCCCC DWSRVHLFWGDERYVPKDDDERNEKQARVALLDHIDIPPSQVHPMPAGDGEFGNDLEAAA CCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCHHHHH LAYEQLLAAYAAPGYPTPNFDVHLMGMGPEGHINSLFPNTVAVRETSRMVVGVRNSPKPP HHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCEEEEEECCCCCCC PERITLTLNAIQRSREVWLMVSGTAKADAVAAAMGGAPSASIPAAGAVGLETTLWLLDEE CCEEEEEHHHHHCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCH AAAKIPG HHCCCCC >Mature Secondary Structure SASVEIFSDSKTMVGAAGKRLASTIQSAVAARERALIVLTGGSSGIGLLRDLATRGQQI CCEEEEECCCCEEHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHCCCCC DWSRVHLFWGDERYVPKDDDERNEKQARVALLDHIDIPPSQVHPMPAGDGEFGNDLEAAA CCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCHHHHH LAYEQLLAAYAAPGYPTPNFDVHLMGMGPEGHINSLFPNTVAVRETSRMVVGVRNSPKPP HHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCEEEEEECCCCCCC PERITLTLNAIQRSREVWLMVSGTAKADAVAAAMGGAPSASIPAAGAVGLETTLWLLDEE CCEEEEEHHHHHCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCH AAAKIPG HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11234002