| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is 221229696
Identifier: 221229696
GI number: 221229696
Start: 693620
End: 694435
Strand: Reverse
Name: 221229696
Synonym: MLBr_00569
Alternate gene names: NA
Gene position: 694435-693620 (Counterclockwise)
Preceding gene: 221229706
Following gene: 221229686
Centisome position: 21.25
GC content: 57.84
Gene sequence:
>816_bases ATGGGAATTATGCGGGCAGCAATTCGAGGTGTTCTTGTGGTGATCGGGATCGCGGCGACGGTGATCGCGGGACCGGTGCG TGTAAGCCTAGCGGCGGTGAACCATGCGCATGGCTTCGCCATCACGTCAATTCTACCTACACGGGACGCGGTGGTGGGTG TGGCGCACCCCGTGGTAGTGACATTCGGCGCACCCGTCACTAACCGTAAGGCGACCGAGCTTTCCCTTAAAGTGCGCTCG GCGCCAGCGATGAACGGCAAGTTTGACTGGCTCGACAGCAAAGTTGTGCAGTGGGTTCCTGACCGCTATTGGCCAGAGCA CAGCACGATCGCACTCGCGGTGGGCAACCTGTCCACCAACTTCAAAACGGGTCCTGCCATTCTCGGTATTGCGGATATCT CGAATCACACGTTCACGGTGACGATCGACGGAGTCGAGGCGGAGACACCCCCTCCACTGCCTTCACCCCACCATCGGCCC CACTGGGGAGAAGAAGGGGTGATGCCGGCCTCGATGGGTAAGACAGAATTCCCGACACCTACCGGTAAGTATACCGTCAT GTCCAAGGATCGCTCGGTGATTATGGATTCGAGTAGTGTCGGCATACCTGTCGACGATCCCGAGGGGTACAGGCTCTCGG TGGATTACGCCGTCCGTATCAGCAGCCGTGGCCTCTACATCCATTCGGCTCCGTGGGCGGTGCAGTCAATGGGTTTTGAT AACACCAGCCACGGCTGCATTAGCTTAAGCCCTGCCGACGCAGAATGGTACTACAACACAGTTAACATTGGTGACCCGGT AATCGTGAAGGAATAA
Upstream 100 bases:
>100_bases CCGAGACTTGACCAAGCTATCTAGCGCGTGCGTACCCGCTCACTCGGCATGGACCCCTACCATCGCCAACATCAACAACA TTTTGGTCATCTCAAAGGTG
Downstream 100 bases:
>100_bases CGGGTGTACACTCGCTTTTTCCAAGACGTGGCAATGGAAAATCGATTGAAAGTTGACACCATCGTCTGTCTGGATGATCT ATATCTATACGAGTGAAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MGIMRAAIRGVLVVIGIAATVIAGPVRVSLAAVNHAHGFAITSILPTRDAVVGVAHPVVVTFGAPVTNRKATELSLKVRS APAMNGKFDWLDSKVVQWVPDRYWPEHSTIALAVGNLSTNFKTGPAILGIADISNHTFTVTIDGVEAETPPPLPSPHHRP HWGEEGVMPASMGKTEFPTPTGKYTVMSKDRSVIMDSSSVGIPVDDPEGYRLSVDYAVRISSRGLYIHSAPWAVQSMGFD NTSHGCISLSPADAEWYYNTVNIGDPVIVKE
Sequences:
>Translated_271_residues MGIMRAAIRGVLVVIGIAATVIAGPVRVSLAAVNHAHGFAITSILPTRDAVVGVAHPVVVTFGAPVTNRKATELSLKVRS APAMNGKFDWLDSKVVQWVPDRYWPEHSTIALAVGNLSTNFKTGPAILGIADISNHTFTVTIDGVEAETPPPLPSPHHRP HWGEEGVMPASMGKTEFPTPTGKYTVMSKDRSVIMDSSSVGIPVDDPEGYRLSVDYAVRISSRGLYIHSAPWAVQSMGFD NTSHGCISLSPADAEWYYNTVNIGDPVIVKE >Mature_270_residues GIMRAAIRGVLVVIGIAATVIAGPVRVSLAAVNHAHGFAITSILPTRDAVVGVAHPVVVTFGAPVTNRKATELSLKVRSA PAMNGKFDWLDSKVVQWVPDRYWPEHSTIALAVGNLSTNFKTGPAILGIADISNHTFTVTIDGVEAETPPPLPSPHHRPH WGEEGVMPASMGKTEFPTPTGKYTVMSKDRSVIMDSSSVGIPVDDPEGYRLSVDYAVRISSRGLYIHSAPWAVQSMGFDN TSHGCISLSPADAEWYYNTVNIGDPVIVKE
Specific function: Unknown
COG id: COG1376
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the YkuD family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005490 [H]
Pfam domain/function: PF03734 YkuD [H]
EC number: NA
Molecular weight: Translated: 29002; Mature: 28871
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIMRAAIRGVLVVIGIAATVIAGPVRVSLAAVNHAHGFAITSILPTRDAVVGVAHPVVV CCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCEEEEEECCCCCCEEEECCEEEE TFGAPVTNRKATELSLKVRSAPAMNGKFDWLDSKVVQWVPDRYWPEHSTIALAVGNLSTN EECCCCCCCCCEEEEEEEECCCCCCCEEECCCCHHHHHCCCCCCCCCCEEEEEECCCCCC FKTGPAILGIADISNHTFTVTIDGVEAETPPPLPSPHHRPHWGEEGVMPASMGKTEFPTP CCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TGKYTVMSKDRSVIMDSSSVGIPVDDPEGYRLSVDYAVRISSRGLYIHSAPWAVQSMGFD CCCEEEEECCCEEEEECCCCCCCCCCCCCCEEEEEEEEEEECCCEEEEECCCEEECCCCC NTSHGCISLSPADAEWYYNTVNIGDPVIVKE CCCCCEEEECCCCCCEEEEEECCCCEEEEEC >Mature Secondary Structure GIMRAAIRGVLVVIGIAATVIAGPVRVSLAAVNHAHGFAITSILPTRDAVVGVAHPVVV CHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCEEEEEECCCCCCEEEECCEEEE TFGAPVTNRKATELSLKVRSAPAMNGKFDWLDSKVVQWVPDRYWPEHSTIALAVGNLSTN EECCCCCCCCCEEEEEEEECCCCCCCEEECCCCHHHHHCCCCCCCCCCEEEEEECCCCCC FKTGPAILGIADISNHTFTVTIDGVEAETPPPLPSPHHRPHWGEEGVMPASMGKTEFPTP CCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TGKYTVMSKDRSVIMDSSSVGIPVDDPEGYRLSVDYAVRISSRGLYIHSAPWAVQSMGFD CCCEEEEECCCEEEEECCCCCCCCCCCCCCEEEEEEEEEEECCCEEEEECCCEEECCCCC NTSHGCISLSPADAEWYYNTVNIGDPVIVKE CCCCCEEEECCCCCCEEEEEECCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]