| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is eccB1 [H]
Identifier: 221229382
GI number: 221229382
Start: 67413
End: 68858
Strand: Reverse
Name: eccB1 [H]
Synonym: MLBr_00054
Alternate gene names: 221229382
Gene position: 68858-67413 (Counterclockwise)
Preceding gene: 221229383
Following gene: 221229381
Centisome position: 2.11
GC content: 58.78
Gene sequence:
>1446_bases ATGGGGCTTCGCCTGACCACCAAGGTTCAGGTCAGCGGCTGGCGCTTCCTGCTTCGCAGGGTTGAGCATGCCATCGTGCG GCGCGACACTCGGATGTTCGACGACCCGCTGCAGTTCTACAGTCGCTCGATCGCCCTTGGCATCGTTGTTGCGGTTGCGC TCCTGATAGGCGCCGTCCTGCTGGCGTACTTCAAACCACAGGGCAAGCTAGGTGCCAGCACCCTTCTGACCGATCGGGCA ACCAATCAGCTCTACGTGCTCTTGTCCGGGCATCTGTATCCAGTGTACAACTTGACCTCGGCGCGACTGGCGCTGGGCAA ACCGGCTAACCCAGCTGCCGTGAAGTCCAGCGAATTGACCAAGCTGCCTATAGGTCAGACCATCGGAATCCCTGGTGCAC CCTACGCCACGCCTGTTTCAGGGGATTCCTCGTCAACCTGGACCTTGTGCGACACCGTCGCCAAGATCGAGAGCGAATCG CCGGCGGTGCAGACTTCGGTTATAGCTCGATCACTACAGATCGACCCTGCGATAAATCCATTGCAACCGAACGAAGCGCT ACTGGCGTCATACCGGGACAAAACGTGGCTAGTTAACTCAAAAGGGCGGCACTCCATCGATCTGGCCGACCGGGCCCTAA CCTCGGCCATAGGAATATCGGTAAACGTTAAGCCAACCCCACTCTCTGAGGGCCTGTTCAACGCACTACCCGACGTCGGC AGGTGGGAGCTGCCGACGATTCCTGACACTGGAGCACCTAATTCGCTGGGGTTATCCCCAGACCTCGTAATTGGGTCGGT GTTCCAAATCCAAATGGAAAAGAGCCCACAGTACTACGTGGTACTCTCCGACGGCATCGCCCAGGTGAATGCCACCACCG CTGATGCGTTGCGCGCTACCCAGTCGCATGGACTGGTAGCGCCTCCATCACTGGTACCAAACGTGGTCGTCCAGATTCCC GAACGGGTCTACGACTCGCCACTGCCCGATGAACCACTCAAGATGGTGGCCCGGGACGACTACCCAACGCTGTGTTGGGC ATGGGAACGCAAAGCCAGTGATCAGGCGCCGAAGAGAACCATGTTGATTGGTCAGCATCTGCCACTACAGCCGTCAGCCA TGAGCACAGGTATAAAACAGATCCGTGGGACAGCAACCGTCTATATTGATGGTGGCAGATACGTGGCGCTACAGTCTCCA GACCCCCGGTACAGTGAATCCCTGTACTACGTTGATCCGGAGGGAGTACGTTACGGCCTGGCGAACTCGGAGGCGGTGAA GGCGCTGGGCCTCGCTTCACCGCAGACAGCGCCCTGGGTGATCGTTCGTCTTCTGGTGGAGGGGCCTGTGCTCTCCAGAG ACGCAGCTCTGTTAGAGCACGATACGCTGATCGCGGACCCAAGCCCACGGAAAGTACCAGCCGGCTACTCTGGAGTGAGG CCATGA
Upstream 100 bases:
>100_bases CGAGCAACTGGATGTGGACCGACTGCAGGAGATCAACGGCTCAGACATGGCCGAGGCGATCGCCACGGTGCACGCACACC TCAACATAAGAGAGTGAACC
Downstream 100 bases:
>100_bases CGACGAAAAAGTTCACCCCGACTATCACCCGCGGACCGCGATTGACACCGGGCGAGATCAACATCACGCCGCCCGATGAC CTCGGTCTTGAGATCCCACC
Product: hypothetical protein
Products: NA
Alternate protein names: ESX conserved component B1; Type VII secretion system protein eccB1; T7SS protein eccB1 [H]
Number of amino acids: Translated: 481; Mature: 480
Protein sequence:
>481_residues MGLRLTTKVQVSGWRFLLRRVEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVALLIGAVLLAYFKPQGKLGASTLLTDRA TNQLYVLLSGHLYPVYNLTSARLALGKPANPAAVKSSELTKLPIGQTIGIPGAPYATPVSGDSSSTWTLCDTVAKIESES PAVQTSVIARSLQIDPAINPLQPNEALLASYRDKTWLVNSKGRHSIDLADRALTSAIGISVNVKPTPLSEGLFNALPDVG RWELPTIPDTGAPNSLGLSPDLVIGSVFQIQMEKSPQYYVVLSDGIAQVNATTADALRATQSHGLVAPPSLVPNVVVQIP ERVYDSPLPDEPLKMVARDDYPTLCWAWERKASDQAPKRTMLIGQHLPLQPSAMSTGIKQIRGTATVYIDGGRYVALQSP DPRYSESLYYVDPEGVRYGLANSEAVKALGLASPQTAPWVIVRLLVEGPVLSRDAALLEHDTLIADPSPRKVPAGYSGVR P
Sequences:
>Translated_481_residues MGLRLTTKVQVSGWRFLLRRVEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVALLIGAVLLAYFKPQGKLGASTLLTDRA TNQLYVLLSGHLYPVYNLTSARLALGKPANPAAVKSSELTKLPIGQTIGIPGAPYATPVSGDSSSTWTLCDTVAKIESES PAVQTSVIARSLQIDPAINPLQPNEALLASYRDKTWLVNSKGRHSIDLADRALTSAIGISVNVKPTPLSEGLFNALPDVG RWELPTIPDTGAPNSLGLSPDLVIGSVFQIQMEKSPQYYVVLSDGIAQVNATTADALRATQSHGLVAPPSLVPNVVVQIP ERVYDSPLPDEPLKMVARDDYPTLCWAWERKASDQAPKRTMLIGQHLPLQPSAMSTGIKQIRGTATVYIDGGRYVALQSP DPRYSESLYYVDPEGVRYGLANSEAVKALGLASPQTAPWVIVRLLVEGPVLSRDAALLEHDTLIADPSPRKVPAGYSGVR P >Mature_480_residues GLRLTTKVQVSGWRFLLRRVEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVALLIGAVLLAYFKPQGKLGASTLLTDRAT NQLYVLLSGHLYPVYNLTSARLALGKPANPAAVKSSELTKLPIGQTIGIPGAPYATPVSGDSSSTWTLCDTVAKIESESP AVQTSVIARSLQIDPAINPLQPNEALLASYRDKTWLVNSKGRHSIDLADRALTSAIGISVNVKPTPLSEGLFNALPDVGR WELPTIPDTGAPNSLGLSPDLVIGSVFQIQMEKSPQYYVVLSDGIAQVNATTADALRATQSHGLVAPPSLVPNVVVQIPE RVYDSPLPDEPLKMVARDDYPTLCWAWERKASDQAPKRTMLIGQHLPLQPSAMSTGIKQIRGTATVYIDGGRYVALQSPD PRYSESLYYVDPEGVRYGLANSEAVKALGLASPQTAPWVIVRLLVEGPVLSRDAALLEHDTLIADPSPRKVPAGYSGVRP
Specific function: Probably part of a complex that is involved in secretion of ESX-1 substrates, such as EsxA (ESAT-6) and EsxB (CFP-10) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the eccB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007795 [H]
Pfam domain/function: PF05108 DUF690 [H]
EC number: NA
Molecular weight: Translated: 51875; Mature: 51744
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLRLTTKVQVSGWRFLLRRVEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVALLIGAVL CCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAYFKPQGKLGASTLLTDRATNQLYVLLSGHLYPVYNLTSARLALGKPANPAAVKSSELT HHHHCCCCCCCCHHHEECCCCCEEEEEEECCEEEEEECCHHHEECCCCCCCCCCCCCCCE KLPIGQTIGIPGAPYATPVSGDSSSTWTLCDTVAKIESESPAVQTSVIARSLQIDPAINP ECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHEECCCCCCC LQPNEALLASYRDKTWLVNSKGRHSIDLADRALTSAIGISVNVKPTPLSEGLFNALPDVG CCCCHHHHHHCCCCEEEECCCCCCEEHHHHHHHHHHHCEEEECCCCCCHHHHHHHCCCCC RWELPTIPDTGAPNSLGLSPDLVIGSVFQIQMEKSPQYYVVLSDGIAQVNATTADALRAT CCCCCCCCCCCCCCCCCCCCCCEECEEEEEEEECCCCEEEEEECCCEEECCCHHHHHHHH QSHGLVAPPSLVPNVVVQIPERVYDSPLPDEPLKMVARDDYPTLCWAWERKASDQAPKRT HCCCCCCCHHHHHHHHHHCCHHHCCCCCCCCHHHHHCCCCCCCEEEEECCCCCCCCCCEE MLIGQHLPLQPSAMSTGIKQIRGTATVYIDGGRYVALQSPDPRYSESLYYVDPEGVRYGL EEECCCCCCCCHHHHHHHHHHCCEEEEEEECCEEEEECCCCCCCCCCEEEECCCCCEECC ANSEAVKALGLASPQTAPWVIVRLLVEGPVLSRDAALLEHDTLIADPSPRKVPAGYSGVR CCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCEEEECCCCCCCCCCCCCCC P C >Mature Secondary Structure GLRLTTKVQVSGWRFLLRRVEHAIVRRDTRMFDDPLQFYSRSIALGIVVAVALLIGAVL CCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAYFKPQGKLGASTLLTDRATNQLYVLLSGHLYPVYNLTSARLALGKPANPAAVKSSELT HHHHCCCCCCCCHHHEECCCCCEEEEEEECCEEEEEECCHHHEECCCCCCCCCCCCCCCE KLPIGQTIGIPGAPYATPVSGDSSSTWTLCDTVAKIESESPAVQTSVIARSLQIDPAINP ECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHEECCCCCCC LQPNEALLASYRDKTWLVNSKGRHSIDLADRALTSAIGISVNVKPTPLSEGLFNALPDVG CCCCHHHHHHCCCCEEEECCCCCCEEHHHHHHHHHHHCEEEECCCCCCHHHHHHHCCCCC RWELPTIPDTGAPNSLGLSPDLVIGSVFQIQMEKSPQYYVVLSDGIAQVNATTADALRAT CCCCCCCCCCCCCCCCCCCCCCEECEEEEEEEECCCCEEEEEECCCEEECCCHHHHHHHH QSHGLVAPPSLVPNVVVQIPERVYDSPLPDEPLKMVARDDYPTLCWAWERKASDQAPKRT HCCCCCCCHHHHHHHHHHCCHHHCCCCCCCCHHHHHCCCCCCCEEEEECCCCCCCCCCEE MLIGQHLPLQPSAMSTGIKQIRGTATVYIDGGRYVALQSPDPRYSESLYYVDPEGVRYGL EEECCCCCCCCHHHHHHHHHHCCEEEEEEECCEEEEECCCCCCCCCCEEEECCCCCEECC ANSEAVKALGLASPQTAPWVIVRLLVEGPVLSRDAALLEHDTLIADPSPRKVPAGYSGVR CCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCEEEECCCCCCCCCCCCCCC P C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]