| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is mnmG [H]
Identifier: 220933187
GI number: 220933187
Start: 2572725
End: 2574611
Strand: Reverse
Name: mnmG [H]
Synonym: Hore_23550
Alternate gene names: 220933187
Gene position: 2574611-2572725 (Counterclockwise)
Preceding gene: 220933188
Following gene: 220933186
Centisome position: 99.86
GC content: 43.67
Gene sequence:
>1887_bases ATGTCTATCTATCCCAAAGAATATGATGTTATTGTTATCGGGGCCGGACATGCCGGGTCTGAGGCATCACTGGCACCTGC CAGAATGGGCTTTAAAGTTCTGACCATGACTGTAGACCTGGACCATGTTGCCTTTATGCCCTGTAATCCATCTCTGGGTG GTCCCGGTAAGTCCCATATTGTCCGGGAGATTGATGCCCTCGGGGGAGAAATGGCCCGTAACATGGATGAAACCATGATC CAGATCAGAATGCTTAATACCAGCAAGGGACCAGCCGTCCGTGGTTTGCGGGGACAGGCTGATAAAAAACAGTACCACCT GAGGATGAAGCGTGTCCTCGAAAGGGAGCCAAATGTTGATTTAAAGCAGGAAATTGCAGAAAAACTGGTCATAGAAGATG GAGAAATAAAAGGGGTTATAACCAAAACCGGTATTCTATACAGAGCTAAAAAAGTCATTGTTACTACGGGTACCTTTTTA AAGGGAAAAATCATCATCGGGGAGGCTACTTTTAATGCCGGGCCCAATCAGCAGTATCCGGCCAATAAGCTATCAGAATC CTTAAAGAAGGCTGGCTTTAAACTTCGACGGTTTAAAACTGGAACCCCGCCCCGGGTTAATAAGAATTCCCTTGATTTTT CTAAAATGAAAGAGCAGACCGGGGATAAGGGGTTGACCTTCTCTTTTGTCTCCCCACCCTTTACCAGGGAACAGGTTTCC TGCTGGTTGACATATACAACAGATGAGACCCATCGTATTATCCAGGAAAACAAGCACCGTACTCCACTTTTCAGTGGTGA TATTGAAGGAGTAGGGCCCAGGTACTGCCCCTCTATTGAGGATAAAGTAGTTCGCTTCCCACATAAAGACAGGCATCAAA TCTTTCTAGAACCTGAAGGGGAGTTTACCGATGAATATTATGTAGCTGGACTTTCAAGCAGCTTACCTGAAGATGTTCAG ATTGATCTGGTCAGGTCGATACCGGGTATGGAAAAGGCTGAGATTATGCGTCCCGCCTATGCCATTGAATATGACTGTAT TGATCCCACTCAGTTAAAGCTAACCCTGGAGGCCAAACACATTAAAGGCCTTTATATGGCCGGTCAGATTAATGGGACTT CCGGTTATGAGGAGGCTGCCGGGCAGGGTCTGATTGCCGGTATTAATGCATCCTTAAGTTTACAGGGTAAAGATCCTTTA ATACTGAAGCGTTCTGAAGCCTATATCGGGGTTTTGATTGATGAACTGGTTACTAAAGGGACCAATGAACCATACCGGAT TATGACCTCAAGGGCAGAGTACCGTCTTATTTTACGACAGGATAATGCTGACCAGCGATTGACTCCAAAAGGTTATGAAA TTGGTTTGATTTCTGAAGAGAGGTATAAAAAATTCAGGAAAAAGGTAGATAAGATTGAAGAGGCCCTTGAATTTTTGAGG TCAAATCAGATCAGTCCTACTCCGGAGGTCAGAGAACGACTAAAGGAATTAAATAGTGGGGATTTGAGTAAACCGGTCAC CCTGGAACAGCTGTTAAGGAGACCTCAACTTGAATACAGAGACCTGAAATATTTTGTTGATGATTTACCTGAGTATCCTG ATGATATTATAGAACAGGTCTCAATTCAGGTTAAATATAAAGGGTATATTGACAGACAGATGTCCCAGATAGAACAGTTT AAAAAAATGGAGGATAAATTAATACCTGATGATATTGATTATCAGGAACTGGAGAACCTCCGTTTGGAGGCCAGGGAAAA ACTTGATAAAATAAAACCCCGTTCCCTTGGGCAGGCTTCCAGAATTTCAGGTGTATCCCCGGCTGATATTTCAGTATTAA TGGTTTATTTAGAACAGCGGCAGAGGAGGAAACAGGGTGAAAAGTAA
Upstream 100 bases:
>100_bases GTTACTGAGGATATTATTGATCGGATTTTTGCTGATTTTTGTCTTGGTAAATAACGAAGATGTTGTAGTTAAAGGAGGTA ATAAGATGAGCAGGGATTTT
Downstream 100 bases:
>100_bases TAAGTTTTATTCCCGGATAGCTGCAGGCCTTGAGGCCATGAATATTGAGTATCAGGAATATATGATTGACCAACTCCAGG ATTATCTAAAATTTTTAAAG
Product: tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
Products: NA
Alternate protein names: Glucose-inhibited division protein A [H]
Number of amino acids: Translated: 628; Mature: 627
Protein sequence:
>628_residues MSIYPKEYDVIVIGAGHAGSEASLAPARMGFKVLTMTVDLDHVAFMPCNPSLGGPGKSHIVREIDALGGEMARNMDETMI QIRMLNTSKGPAVRGLRGQADKKQYHLRMKRVLEREPNVDLKQEIAEKLVIEDGEIKGVITKTGILYRAKKVIVTTGTFL KGKIIIGEATFNAGPNQQYPANKLSESLKKAGFKLRRFKTGTPPRVNKNSLDFSKMKEQTGDKGLTFSFVSPPFTREQVS CWLTYTTDETHRIIQENKHRTPLFSGDIEGVGPRYCPSIEDKVVRFPHKDRHQIFLEPEGEFTDEYYVAGLSSSLPEDVQ IDLVRSIPGMEKAEIMRPAYAIEYDCIDPTQLKLTLEAKHIKGLYMAGQINGTSGYEEAAGQGLIAGINASLSLQGKDPL ILKRSEAYIGVLIDELVTKGTNEPYRIMTSRAEYRLILRQDNADQRLTPKGYEIGLISEERYKKFRKKVDKIEEALEFLR SNQISPTPEVRERLKELNSGDLSKPVTLEQLLRRPQLEYRDLKYFVDDLPEYPDDIIEQVSIQVKYKGYIDRQMSQIEQF KKMEDKLIPDDIDYQELENLRLEAREKLDKIKPRSLGQASRISGVSPADISVLMVYLEQRQRRKQGEK
Sequences:
>Translated_628_residues MSIYPKEYDVIVIGAGHAGSEASLAPARMGFKVLTMTVDLDHVAFMPCNPSLGGPGKSHIVREIDALGGEMARNMDETMI QIRMLNTSKGPAVRGLRGQADKKQYHLRMKRVLEREPNVDLKQEIAEKLVIEDGEIKGVITKTGILYRAKKVIVTTGTFL KGKIIIGEATFNAGPNQQYPANKLSESLKKAGFKLRRFKTGTPPRVNKNSLDFSKMKEQTGDKGLTFSFVSPPFTREQVS CWLTYTTDETHRIIQENKHRTPLFSGDIEGVGPRYCPSIEDKVVRFPHKDRHQIFLEPEGEFTDEYYVAGLSSSLPEDVQ IDLVRSIPGMEKAEIMRPAYAIEYDCIDPTQLKLTLEAKHIKGLYMAGQINGTSGYEEAAGQGLIAGINASLSLQGKDPL ILKRSEAYIGVLIDELVTKGTNEPYRIMTSRAEYRLILRQDNADQRLTPKGYEIGLISEERYKKFRKKVDKIEEALEFLR SNQISPTPEVRERLKELNSGDLSKPVTLEQLLRRPQLEYRDLKYFVDDLPEYPDDIIEQVSIQVKYKGYIDRQMSQIEQF KKMEDKLIPDDIDYQELENLRLEAREKLDKIKPRSLGQASRISGVSPADISVLMVYLEQRQRRKQGEK >Mature_627_residues SIYPKEYDVIVIGAGHAGSEASLAPARMGFKVLTMTVDLDHVAFMPCNPSLGGPGKSHIVREIDALGGEMARNMDETMIQ IRMLNTSKGPAVRGLRGQADKKQYHLRMKRVLEREPNVDLKQEIAEKLVIEDGEIKGVITKTGILYRAKKVIVTTGTFLK GKIIIGEATFNAGPNQQYPANKLSESLKKAGFKLRRFKTGTPPRVNKNSLDFSKMKEQTGDKGLTFSFVSPPFTREQVSC WLTYTTDETHRIIQENKHRTPLFSGDIEGVGPRYCPSIEDKVVRFPHKDRHQIFLEPEGEFTDEYYVAGLSSSLPEDVQI DLVRSIPGMEKAEIMRPAYAIEYDCIDPTQLKLTLEAKHIKGLYMAGQINGTSGYEEAAGQGLIAGINASLSLQGKDPLI LKRSEAYIGVLIDELVTKGTNEPYRIMTSRAEYRLILRQDNADQRLTPKGYEIGLISEERYKKFRKKVDKIEEALEFLRS NQISPTPEVRERLKELNSGDLSKPVTLEQLLRRPQLEYRDLKYFVDDLPEYPDDIIEQVSIQVKYKGYIDRQMSQIEQFK KMEDKLIPDDIDYQELENLRLEAREKLDKIKPRSLGQASRISGVSPADISVLMVYLEQRQRRKQGEK
Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 [H]
COG id: COG0445
COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MnmG family [H]
Homologues:
Organism=Homo sapiens, GI74024895, Length=645, Percent_Identity=40.7751937984496, Blast_Score=445, Evalue=1e-125, Organism=Homo sapiens, GI19882217, Length=664, Percent_Identity=39.0060240963855, Blast_Score=431, Evalue=1e-120, Organism=Homo sapiens, GI183227703, Length=685, Percent_Identity=38.3941605839416, Blast_Score=426, Evalue=1e-119, Organism=Escherichia coli, GI2367273, Length=621, Percent_Identity=48.792270531401, Blast_Score=608, Evalue=1e-175, Organism=Caenorhabditis elegans, GI17534255, Length=630, Percent_Identity=40.1587301587302, Blast_Score=450, Evalue=1e-126, Organism=Saccharomyces cerevisiae, GI6321202, Length=637, Percent_Identity=41.7582417582418, Blast_Score=475, Evalue=1e-134, Organism=Drosophila melanogaster, GI24658174, Length=636, Percent_Identity=41.8238993710692, Blast_Score=458, Evalue=1e-129,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004416 - InterPro: IPR002218 - InterPro: IPR020595 [H]
Pfam domain/function: PF01134 GIDA [H]
EC number: NA
Molecular weight: Translated: 71283; Mature: 71152
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: PS01280 GIDA_1 ; PS01281 GIDA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIYPKEYDVIVIGAGHAGSEASLAPARMGFKVLTMTVDLDHVAFMPCNPSLGGPGKSHI CCCCCCCCCEEEEECCCCCCCCCCCHHHCCEEEEEEEEEECCEEEECCCCCCCCCCHHHH VREIDALGGEMARNMDETMIQIRMLNTSKGPAVRGLRGQADKKQYHLRMKRVLEREPNVD HHHHHHHHHHHHHCHHHHEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC LKQEIAEKLVIEDGEIKGVITKTGILYRAKKVIVTTGTFLKGKIIIGEATFNAGPNQQYP HHHHHHHHHCCCCCCEEEEEEECCCEEEEEEEEEEECCEEEEEEEEEEEECCCCCCCCCC ANKLSESLKKAGFKLRRFKTGTPPRVNKNSLDFSKMKEQTGDKGLTFSFVSPPFTREQVS HHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCEE CWLTYTTDETHRIIQENKHRTPLFSGDIEGVGPRYCPSIEDKVVRFPHKDRHQIFLEPEG EEEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHEECCCCCCCEEEECCCC EFTDEYYVAGLSSSLPEDVQIDLVRSIPGMEKAEIMRPAYAIEYDCIDPTQLKLTLEAKH CCCCCCEEEECCCCCCCCHHHHHHHCCCCCCHHHHHCCCCEEEECCCCCCEEEEEEEEEC IKGLYMAGQINGTSGYEEAAGQGLIAGINASLSLQGKDPLILKRSEAYIGVLIDELVTKG CCEEEEEEEECCCCCHHHHCCCCEEEECCCEEEECCCCCEEEEECCCHHHHHHHHHHHCC TNEPYRIMTSRAEYRLILRQDNADQRLTPKGYEIGLISEERYKKFRKKVDKIEEALEFLR CCCCCEEEECCCEEEEEEEECCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHH SNQISPTPEVRERLKELNSGDLSKPVTLEQLLRRPQLEYRDLKYFVDDLPEYPDDIIEQV CCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHC SIQVKYKGYIDRQMSQIEQFKKMEDKLIPDDIDYQELENLRLEAREKLDKIKPRSLGQAS EEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHH RISGVSPADISVLMVYLEQRQRRKQGEK HCCCCCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SIYPKEYDVIVIGAGHAGSEASLAPARMGFKVLTMTVDLDHVAFMPCNPSLGGPGKSHI CCCCCCCCEEEEECCCCCCCCCCCHHHCCEEEEEEEEEECCEEEECCCCCCCCCCHHHH VREIDALGGEMARNMDETMIQIRMLNTSKGPAVRGLRGQADKKQYHLRMKRVLEREPNVD HHHHHHHHHHHHHCHHHHEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC LKQEIAEKLVIEDGEIKGVITKTGILYRAKKVIVTTGTFLKGKIIIGEATFNAGPNQQYP HHHHHHHHHCCCCCCEEEEEEECCCEEEEEEEEEEECCEEEEEEEEEEEECCCCCCCCCC ANKLSESLKKAGFKLRRFKTGTPPRVNKNSLDFSKMKEQTGDKGLTFSFVSPPFTREQVS HHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCEE CWLTYTTDETHRIIQENKHRTPLFSGDIEGVGPRYCPSIEDKVVRFPHKDRHQIFLEPEG EEEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHEECCCCCCCEEEECCCC EFTDEYYVAGLSSSLPEDVQIDLVRSIPGMEKAEIMRPAYAIEYDCIDPTQLKLTLEAKH CCCCCCEEEECCCCCCCCHHHHHHHCCCCCCHHHHHCCCCEEEECCCCCCEEEEEEEEEC IKGLYMAGQINGTSGYEEAAGQGLIAGINASLSLQGKDPLILKRSEAYIGVLIDELVTKG CCEEEEEEEECCCCCHHHHCCCCEEEECCCEEEECCCCCEEEEECCCHHHHHHHHHHHCC TNEPYRIMTSRAEYRLILRQDNADQRLTPKGYEIGLISEERYKKFRKKVDKIEEALEFLR CCCCCEEEECCCEEEEEEEECCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHH SNQISPTPEVRERLKELNSGDLSKPVTLEQLLRRPQLEYRDLKYFVDDLPEYPDDIIEQV CCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHC SIQVKYKGYIDRQMSQIEQFKKMEDKLIPDDIDYQELENLRLEAREKLDKIKPRSLGQAS EEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHH RISGVSPADISVLMVYLEQRQRRKQGEK HCCCCCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA