Click here to switch to the map view.

The map label for this gene is yurM [H]

Identifier: 220933130

GI number: 220933130

Start: 2511365

End: 2512186

Strand: Reverse

Name: yurM [H]

Synonym: Hore_22980

Alternate gene names: 220933130

Gene position: 2512186-2511365 (Counterclockwise)

Preceding gene: 220933131

Following gene: 220933129

Centisome position: 97.44

GC content: 36.62

Gene sequence:

>822_bases
TTGGCGAGAAAGAAGATATATATTTATATTGGGTTGATTTTGTTTGCTTTAATTGCACTGGCTCCGATATTATGGGTTTT
CACGACATCGTTAAAACCCGCATCTGAAGCCATGGAATTTCCACCCCGGTTAATTCCCAATAAGGTGACCTGGGAGAATT
ATAAATTTGTGTTTACAAATAGCTATCTGGTTAGAAGCCTTATTAATAGTTTTATTGTGGTAATACCGAGTGCTTTTTTC
AGTGTTTTAATTAGTGCCCTGGCAGCCTATGCCTTTGCCCGATATAAGTTTAAAGGGAAGGATACTTTATTTAGAATTAT
GCTGGGACTATTTATGATTCCTGTTCTGATGAATATTATTCCCCTTTATATTAGTCTCCAGAAATTAAACCTATTAAACA
ATTACCTGGGATTAATCTTAACTTATCAGGTATTAATCGTCCCCTTAAATATCTTTATGTTAAAAAATTATTTTGAAACC
ATACCGGTTGAATTAGAAGAGGCAGCTATGATAGACGGATGTTCCCGTTTATCAGCCCTGACTAAAGTTGTATTACCCCT
GGTATGGCCAGGTCTGGCTACAGCTTCAATTCTATCATTTAGATTTGCCTGGAATCAGTTTCTTTTCCCACTTACTTTCA
CCAGTCAGCCTGAGATGCAGGTTTTCCAGGTTGCCATATATAACTTTATGGGTCTATATCAGGTTAACTGGGGTTATTTA
ACAGCCAGTATTGTTATTGGGATGGTTCCTATATTAATCATATTAATTATTTTCCAGAGAAGGTTTGTTGAAGGGCTGAC
AGCAGGGGCTGTAAAAGGTTAA

Upstream 100 bases:

>100_bases
AAACTGTCAATCGGGTCATCGATAGGTTTTATTTTGCTTATAATTAATGCCATTGCTGCTTATTTCTATGTTAAACTGGT
ACAGAGGGAGGGTTAATACA

Downstream 100 bases:

>100_bases
GCTGTAAAAGGATAGATAGAAAGGATGAAAAAAATGCCTGAGGTAACAAATGCACACATAATTTCTCATACCCACTGGGA
TCGGGAATGGTTTTTAAATA

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MARKKIYIYIGLILFALIALAPILWVFTTSLKPASEAMEFPPRLIPNKVTWENYKFVFTNSYLVRSLINSFIVVIPSAFF
SVLISALAAYAFARYKFKGKDTLFRIMLGLFMIPVLMNIIPLYISLQKLNLLNNYLGLILTYQVLIVPLNIFMLKNYFET
IPVELEEAAMIDGCSRLSALTKVVLPLVWPGLATASILSFRFAWNQFLFPLTFTSQPEMQVFQVAIYNFMGLYQVNWGYL
TASIVIGMVPILIILIIFQRRFVEGLTAGAVKG

Sequences:

>Translated_273_residues
MARKKIYIYIGLILFALIALAPILWVFTTSLKPASEAMEFPPRLIPNKVTWENYKFVFTNSYLVRSLINSFIVVIPSAFF
SVLISALAAYAFARYKFKGKDTLFRIMLGLFMIPVLMNIIPLYISLQKLNLLNNYLGLILTYQVLIVPLNIFMLKNYFET
IPVELEEAAMIDGCSRLSALTKVVLPLVWPGLATASILSFRFAWNQFLFPLTFTSQPEMQVFQVAIYNFMGLYQVNWGYL
TASIVIGMVPILIILIIFQRRFVEGLTAGAVKG
>Mature_272_residues
ARKKIYIYIGLILFALIALAPILWVFTTSLKPASEAMEFPPRLIPNKVTWENYKFVFTNSYLVRSLINSFIVVIPSAFFS
VLISALAAYAFARYKFKGKDTLFRIMLGLFMIPVLMNIIPLYISLQKLNLLNNYLGLILTYQVLIVPLNIFMLKNYFETI
PVELEEAAMIDGCSRLSALTKVVLPLVWPGLATASILSFRFAWNQFLFPLTFTSQPEMQVFQVAIYNFMGLYQVNWGYLT
ASIVIGMVPILIILIIFQRRFVEGLTAGAVKG

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=272, Percent_Identity=33.4558823529412, Blast_Score=142, Evalue=2e-35,
Organism=Escherichia coli, GI1790464, Length=271, Percent_Identity=33.210332103321, Blast_Score=114, Evalue=7e-27,
Organism=Escherichia coli, GI1789860, Length=270, Percent_Identity=26.6666666666667, Blast_Score=100, Evalue=8e-23,
Organism=Escherichia coli, GI1787368, Length=185, Percent_Identity=24.3243243243243, Blast_Score=67, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31044; Mature: 30913

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARKKIYIYIGLILFALIALAPILWVFTTSLKPASEAMEFPPRLIPNKVTWENYKFVFTN
CCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEEC
SYLVRSLINSFIVVIPSAFFSVLISALAAYAFARYKFKGKDTLFRIMLGLFMIPVLMNII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
PLYISLQKLNLLNNYLGLILTYQVLIVPLNIFMLKNYFETIPVELEEAAMIDGCSRLSAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
TKVVLPLVWPGLATASILSFRFAWNQFLFPLTFTSQPEMQVFQVAIYNFMGLYQVNWGYL
HHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHEECHHHH
TASIVIGMVPILIILIIFQRRFVEGLTAGAVKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ARKKIYIYIGLILFALIALAPILWVFTTSLKPASEAMEFPPRLIPNKVTWENYKFVFTN
CCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEEC
SYLVRSLINSFIVVIPSAFFSVLISALAAYAFARYKFKGKDTLFRIMLGLFMIPVLMNII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
PLYISLQKLNLLNNYLGLILTYQVLIVPLNIFMLKNYFETIPVELEEAAMIDGCSRLSAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
TKVVLPLVWPGLATASILSFRFAWNQFLFPLTFTSQPEMQVFQVAIYNFMGLYQVNWGYL
HHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHEECHHHH
TASIVIGMVPILIILIIFQRRFVEGLTAGAVKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]