| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is yqgH [H]
Identifier: 220932994
GI number: 220932994
Start: 2352694
End: 2353650
Strand: Reverse
Name: yqgH [H]
Synonym: Hore_21615
Alternate gene names: 220932994
Gene position: 2353650-2352694 (Counterclockwise)
Preceding gene: 220932995
Following gene: 220932993
Centisome position: 91.29
GC content: 38.66
Gene sequence:
>957_bases ATGTCATTAAAACAAAGGGGGGATAGTATCCCCCCTCTACAGTTACCTATAAAAAGTATTACAGGGGAGGATGTTATGTT GAACTGGAAAACTAAAGAGAAGTTAATTAAGGGAACCCTGTTTATTTTTGCTTTATCTTCAATTGTGTTTTTAACAGCAA TTGTAATAACCCTTTTTAATGAAGGTTTGCCTATATTCAACGAAACAGGCATACTGGAATTTATCTTCGGGCGGGAATGG TATCCTTATTATGATGATTATGGAATTTTACCTTTGATTTGTGCTTCACTATTGGTTACTGTTGGAGCTATGGTGGTTTC GGTACCTCTGGGTATATCTTCTGCAATATTTATATCTTATATTTTACCTGATAAATTAAAAAATTATGTTAAACCAATTG TTGAGTTGCTGGCTGGGGTGCCATCAGTGGTTTATGGTCTTTTTGGTATGAAAATACTGGCTCCTTTTATTAGAGACTTA TTTAATTTACCGACAGGTCTTAATGGCTTAACTGCTTCAATTATGCTGGGGATTATGGCTTTACCAACCATATCCAGTCT GGCTGAAGATGCCATATCTTCTGTTCCTAAAAGCTTTAGAAATGCTTCACTGGCCCTTGGTGGAACTAAATGGGAGACAA TAAGCAAAGTTATTTTACCAACTGCTTCTTCCGGTATTGTAACAGCTGTTATTCTGGGAATGGGTCGAGCCATCGGGGAA ACCATGACTGTCTTGATGGTTGCCGGTGGGGCTTCAGCTATGCCTGATAGTATTCTCAGGCCCCTGAGGCCGATGACAGC TAACATAGCAGCAGAGATGGGAGAGGCACCTGTTGGAAGTGAACACTACCATGCTCTATTTGGGATAGGTATAATTTTGT TTTTTATTACTTTACTTTTTAACATTATCGCCGATATTGCTTCCCAACGTTTTAAAGAGAAGGTGAGTGGATTATGA
Upstream 100 bases:
>100_bases AAACACACAACAAGAAGTCATATAAAAAACATTAAGTAAGAGTTAACATTACCAATTAGAATACCACCAGATAAGTTTAT AATAATATAAGCAACAGTAT
Downstream 100 bases:
>100_bases AAATTAATAAATTACAGTATCGTCATTTAAAACAGAAAATTGCCTTTTCTTTTTTTGGGTTAACTCTGTTTATAGCCCTT GGTATTTTGGCATTAATTAT
Product: phosphate ABC transporter permease PstA
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MSLKQRGDSIPPLQLPIKSITGEDVMLNWKTKEKLIKGTLFIFALSSIVFLTAIVITLFNEGLPIFNETGILEFIFGREW YPYYDDYGILPLICASLLVTVGAMVVSVPLGISSAIFISYILPDKLKNYVKPIVELLAGVPSVVYGLFGMKILAPFIRDL FNLPTGLNGLTASIMLGIMALPTISSLAEDAISSVPKSFRNASLALGGTKWETISKVILPTASSGIVTAVILGMGRAIGE TMTVLMVAGGASAMPDSILRPLRPMTANIAAEMGEAPVGSEHYHALFGIGIILFFITLLFNIIADIASQRFKEKVSGL
Sequences:
>Translated_318_residues MSLKQRGDSIPPLQLPIKSITGEDVMLNWKTKEKLIKGTLFIFALSSIVFLTAIVITLFNEGLPIFNETGILEFIFGREW YPYYDDYGILPLICASLLVTVGAMVVSVPLGISSAIFISYILPDKLKNYVKPIVELLAGVPSVVYGLFGMKILAPFIRDL FNLPTGLNGLTASIMLGIMALPTISSLAEDAISSVPKSFRNASLALGGTKWETISKVILPTASSGIVTAVILGMGRAIGE TMTVLMVAGGASAMPDSILRPLRPMTANIAAEMGEAPVGSEHYHALFGIGIILFFITLLFNIIADIASQRFKEKVSGL >Mature_317_residues SLKQRGDSIPPLQLPIKSITGEDVMLNWKTKEKLIKGTLFIFALSSIVFLTAIVITLFNEGLPIFNETGILEFIFGREWY PYYDDYGILPLICASLLVTVGAMVVSVPLGISSAIFISYILPDKLKNYVKPIVELLAGVPSVVYGLFGMKILAPFIRDLF NLPTGLNGLTASIMLGIMALPTISSLAEDAISSVPKSFRNASLALGGTKWETISKVILPTASSGIVTAVILGMGRAIGET MTVLMVAGGASAMPDSILRPLRPMTANIAAEMGEAPVGSEHYHALFGIGIILFFITLLFNIIADIASQRFKEKVSGL
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0573
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790164, Length=276, Percent_Identity=31.1594202898551, Blast_Score=132, Evalue=2e-32, Organism=Escherichia coli, GI1790163, Length=233, Percent_Identity=27.4678111587983, Blast_Score=78, Evalue=6e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 34159; Mature: 34028
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKQRGDSIPPLQLPIKSITGEDVMLNWKTKEKLIKGTLFIFALSSIVFLTAIVITLFN CCCCCCCCCCCCCCCCHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGLPIFNETGILEFIFGREWYPYYDDYGILPLICASLLVTVGAMVVSVPLGISSAIFISY CCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH ILPDKLKNYVKPIVELLAGVPSVVYGLFGMKILAPFIRDLFNLPTGLNGLTASIMLGIMA HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH LPTISSLAEDAISSVPKSFRNASLALGGTKWETISKVILPTASSGIVTAVILGMGRAIGE HHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH TMTVLMVAGGASAMPDSILRPLRPMTANIAAEMGEAPVGSEHYHALFGIGIILFFITLLF HHHHHHEECCCCCCCHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH NIIADIASQRFKEKVSGL HHHHHHHHHHHHHHHCCC >Mature Secondary Structure SLKQRGDSIPPLQLPIKSITGEDVMLNWKTKEKLIKGTLFIFALSSIVFLTAIVITLFN CCCCCCCCCCCCCCCHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGLPIFNETGILEFIFGREWYPYYDDYGILPLICASLLVTVGAMVVSVPLGISSAIFISY CCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH ILPDKLKNYVKPIVELLAGVPSVVYGLFGMKILAPFIRDLFNLPTGLNGLTASIMLGIMA HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH LPTISSLAEDAISSVPKSFRNASLALGGTKWETISKVILPTASSGIVTAVILGMGRAIGE HHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH TMTVLMVAGGASAMPDSILRPLRPMTANIAAEMGEAPVGSEHYHALFGIGIILFFITLLF HHHHHHEECCCCCCCHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH NIIADIASQRFKEKVSGL HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]