| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is pstS [H]
Identifier: 220932990
GI number: 220932990
Start: 2348668
End: 2349576
Strand: Reverse
Name: pstS [H]
Synonym: Hore_21580
Alternate gene names: 220932990
Gene position: 2349576-2348668 (Counterclockwise)
Preceding gene: 220932991
Following gene: 220932989
Centisome position: 91.13
GC content: 38.5
Gene sequence:
>909_bases ATGAATTTAAAAAAGCTAACAGTATTATTATTGAGCTTAGTTTTAATAGTTGGACTGGCTGGTTGTGGTGGAGGAGGAAC CAAACAGCAGGCTTATATTCAAATAAAAGGATCTGATACTGAGGTAAACCTGGTTCAGCACCTGGCAGAGGTATACATGG AGGGTTCAGATACAAAAATTTCGGTTACCGGAGGGGGATCCGGGACAGGTATTGCTGCCCTTATAAACAAAAAAGTTGAT ATTGCCAATGCTTCAAGAACGATGAAAGAATCAGAAATTAACCAGGCTGAGGAAAATGGTGTTGATCCTGTAAGAATTGT AATCGCTATGGATGGTCTTTCTGTTATTACTCATGAAAAAAATCCTGTAACTGAACTGACTGTTGAACAGATTGGAAAAA TCTTTAAAGGTGAAATAACCAACTGGAAAGATGTTGGTGGTCCCGATCAGGAAATATCTCTTTACGGTAGGCAGAGTAAT TCAGGAACGTTTGTATTTTTCAGGGATCATGTCCTTAAAGGTGATTATTCCCAGAATATGAAAAGGATGAATGGTAATGC CCAGATTGTTGAAGCCATCAAGGCTGATAATGCAGGAATTGGGTATGTTGGTGTTGGTTATGTAGTTGATGACAACGGTC ATGAGATTGAAGGTGTTAACATTGTAAATGTTTCCAGGACAGAAAACGATCCGGCGGTTAGTCCTCTCAAGGCTGAAAAT GTAAAAAATGGCAGCTATCCTCTGGCCAGGCCTTTAAACCAGTATGTAAATGGTAAACCTGAAGGAGCAGTTCTTGATTT TATTAAATTTGAGTTAAGTGAAGAAGGTCAGAAAATTGCTGTGGAAGAAGGTTTTTATCCTGTAAGCCCTGAATACCAGA AGCTAAACAAAAAGAATCTTGATTTTTAA
Upstream 100 bases:
>100_bases CATTATTTTAACAAAGATGTAACAATAAATTAACTAATAATTGTTATACTAATAACGGATTAAAAGAATTATAGTAATTA TATATTAAGGAGGGCAATAA
Downstream 100 bases:
>100_bases ATTAAACTGAATGAAGGGGAGGATTTAATTGCGCCGCTGGAAGGAGAAATTGATAGAACTGTTTTTTATGTTAAACGGAT TAGTAGTAATTATTGCCCTG
Product: phosphate binding protein
Products: NA
Alternate protein names: PBP [H]
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MNLKKLTVLLLSLVLIVGLAGCGGGGTKQQAYIQIKGSDTEVNLVQHLAEVYMEGSDTKISVTGGGSGTGIAALINKKVD IANASRTMKESEINQAEENGVDPVRIVIAMDGLSVITHEKNPVTELTVEQIGKIFKGEITNWKDVGGPDQEISLYGRQSN SGTFVFFRDHVLKGDYSQNMKRMNGNAQIVEAIKADNAGIGYVGVGYVVDDNGHEIEGVNIVNVSRTENDPAVSPLKAEN VKNGSYPLARPLNQYVNGKPEGAVLDFIKFELSEEGQKIAVEEGFYPVSPEYQKLNKKNLDF
Sequences:
>Translated_302_residues MNLKKLTVLLLSLVLIVGLAGCGGGGTKQQAYIQIKGSDTEVNLVQHLAEVYMEGSDTKISVTGGGSGTGIAALINKKVD IANASRTMKESEINQAEENGVDPVRIVIAMDGLSVITHEKNPVTELTVEQIGKIFKGEITNWKDVGGPDQEISLYGRQSN SGTFVFFRDHVLKGDYSQNMKRMNGNAQIVEAIKADNAGIGYVGVGYVVDDNGHEIEGVNIVNVSRTENDPAVSPLKAEN VKNGSYPLARPLNQYVNGKPEGAVLDFIKFELSEEGQKIAVEEGFYPVSPEYQKLNKKNLDF >Mature_302_residues MNLKKLTVLLLSLVLIVGLAGCGGGGTKQQAYIQIKGSDTEVNLVQHLAEVYMEGSDTKISVTGGGSGTGIAALINKKVD IANASRTMKESEINQAEENGVDPVRIVIAMDGLSVITHEKNPVTELTVEQIGKIFKGEITNWKDVGGPDQEISLYGRQSN SGTFVFFRDHVLKGDYSQNMKRMNGNAQIVEAIKADNAGIGYVGVGYVVDDNGHEIEGVNIVNVSRTENDPAVSPLKAEN VKNGSYPLARPLNQYVNGKPEGAVLDFIKFELSEEGQKIAVEEGFYPVSPEYQKLNKKNLDF
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32646; Mature: 32646
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLKKLTVLLLSLVLIVGLAGCGGGGTKQQAYIQIKGSDTEVNLVQHLAEVYMEGSDTKI CCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCEE SVTGGGSGTGIAALINKKVDIANASRTMKESEINQAEENGVDPVRIVIAMDGLSVITHEK EEECCCCCCCEEEECCCCCEECCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEECC NPVTELTVEQIGKIFKGEITNWKDVGGPDQEISLYGRQSNSGTFVFFRDHVLKGDYSQNM CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECEEECCCHHHHH KRMNGNAQIVEAIKADNAGIGYVGVGYVVDDNGHEIEGVNIVNVSRTENDPAVSPLKAEN HHCCCCHHEEHEECCCCCCCCEEEEEEEECCCCCEECCEEEEEEECCCCCCCCCCCCCCC VKNGSYPLARPLNQYVNGKPEGAVLDFIKFELSEEGQKIAVEEGFYPVSPEYQKLNKKNL CCCCCCCHHHHHHHHHCCCCCCCEEHHHHHHCCCCCCEEEEECCCCCCCCCHHHHCCCCC DF CC >Mature Secondary Structure MNLKKLTVLLLSLVLIVGLAGCGGGGTKQQAYIQIKGSDTEVNLVQHLAEVYMEGSDTKI CCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCEE SVTGGGSGTGIAALINKKVDIANASRTMKESEINQAEENGVDPVRIVIAMDGLSVITHEK EEECCCCCCCEEEECCCCCEECCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEECC NPVTELTVEQIGKIFKGEITNWKDVGGPDQEISLYGRQSNSGTFVFFRDHVLKGDYSQNM CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECEEECCCHHHHH KRMNGNAQIVEAIKADNAGIGYVGVGYVVDDNGHEIEGVNIVNVSRTENDPAVSPLKAEN HHCCCCHHEEHEECCCCCCCCEEEEEEEECCCCCEECCEEEEEEECCCCCCCCCCCCCCC VKNGSYPLARPLNQYVNGKPEGAVLDFIKFELSEEGQKIAVEEGFYPVSPEYQKLNKKNL CCCCCCCHHHHHHHHHCCCCCCCEEHHHHHHCCCCCCEEEEECCCCCCCCCHHHHCCCCC DF CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA