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The map label for this gene is 220932972

Identifier: 220932972

GI number: 220932972

Start: 2328731

End: 2330233

Strand: Reverse

Name: 220932972

Synonym: Hore_21400

Alternate gene names: NA

Gene position: 2330233-2328731 (Counterclockwise)

Preceding gene: 220932973

Following gene: 220932971

Centisome position: 90.38

GC content: 44.11

Gene sequence:

>1503_bases
ATGCCCCAACAACAGCTAACAGTTAGTGAAGAACTGGCCCGCCGGGTTGTTGATTTTGAGGTAGTTAGAAATGTAGGTAT
TCCTTCAGAGTTACCCCCGGCAGAAAGGGTTGTCAGTGCCAATGCCCGGCTTGAAATAACTGAAGCAACAGCCGGACAGG
GGAATGTTGTTATAAATGGAATTATCAGGTCTACTATTTTTTATGCCTCTGCAGAAGACCCTTCAAATGTTGTCAGTATC
AGGCGTAATTTTAATTTTACCGAACGGGTAAACATTCCCGGGGCCAGGCCCGGGGCTGAAGTAAATGTTGATGCCAGTAT
TGGAGACATTGATTTCTATGTAATTAACAATAGATTGCTGGGAATAGAATTTGTAGTTGTTGCTGACCTGGAAATAACCG
TTCCCGAGACAGTACCGGTTGTAGAAGAACCGGAAGAGGTCGAATTCAGGCGTCGTCGAATCAGGATAAGAAGAACCATT
GTTGAAAGGAACTTTGTTAGAGAGTTGACTTCTGTTGAAAGGTTACCGTCCGATGCTGAAGATATAAGGAGAATTATTGA
TGTCGAGTCTACTATTCAATTAATAGATATTATAACCGGAAATAACCGGGTAACCATCAGGGGAGTGGTTAATAACCGTA
TTTTATATGTGAACAGGCAGGGACAGCTGGAGTTTTTCTCTATTTCATTCCCGGTTACTGAAACCTTTACATTAAGAGGG
GTTGATCCCGGGGATGAGGCTTTTGTAGACACTGTTATCAGGAGTGAGGAAGCAAGTCTTGTCGACAACAGGAGGATAAG
ATTTAATATTACAGCCCTGTTTAATATCTTGGTAGTCAGGGAAGAAGAGGTTACAGTCCCGGTCGGGGTTATTACCCCAG
GGGTTTTTCCGGAAAGGAGAACTGTTATCGTTGACAGGGTTGTTGCTGAAGAAAGAACCAGGGTTTTAGCCCGGGACCAG
GTCACTGTTCCAGAAGGGAACCCTGACATTGACCGGGTTATTAGAGCAACCGGTCAATTCATTGGTGGTACTGTCAGTGC
TGAAACCGCCAGTGGAGGGGTTTTTGTGGATGGTGAAATTGCTGTTAATATTCTTTATGTGGCTGACCTACCGCAGCAAC
CTGTTTACTTTACCTCGACAGTTATAGACCTCAATACCTTTATAAATATAGAGGGAGTAACTGCTGATATGGATGCAGTG
GTAGATGCAGAAGTTGTCCGGGTTTCTGCCAGCAGGGTCAGTGCCAGACAGATTAATGTACGGGTAGTGGTTGAACTTAA
CCTGGTTGTGACAGAAAGAGTCAGAATACCCCTTGTTATCAGGGTTGGAGAAGAGCCGGCTGACGAAGAAGGTTTTATTA
CCTATACGGTTCAACCTGGAGATACCCTGTTTTTAATTTCCAGGAGGTATGGTGTATCTATTGCGAGACTGGTTGAAATT
AATAATATTGCCGATCCCGATAATCTCAGGGTAGGCCAGCAATTATTAATTCCGGCAGGTTGA

Upstream 100 bases:

>100_bases
AATAGCAAAAACAAAGATAAAACCAGAATTAATATAAAACCCCAGAAGGTTAAAAGAATAATAAGGATAAAGAAAAAATG
AGGAGAAAGGAGGTCAGGAT

Downstream 100 bases:

>100_bases
TTATTTTTAAACACAACCTTTTTTCAGGTGATTTATACCTGGAATAAAGGGTTGTGTTTTTTTATTTATTTCATATTAAT
TAAATGTTTTTTAGGAATAA

Product: Peptidoglycan-binding LysM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 500; Mature: 499

Protein sequence:

>500_residues
MPQQQLTVSEELARRVVDFEVVRNVGIPSELPPAERVVSANARLEITEATAGQGNVVINGIIRSTIFYASAEDPSNVVSI
RRNFNFTERVNIPGARPGAEVNVDASIGDIDFYVINNRLLGIEFVVVADLEITVPETVPVVEEPEEVEFRRRRIRIRRTI
VERNFVRELTSVERLPSDAEDIRRIIDVESTIQLIDIITGNNRVTIRGVVNNRILYVNRQGQLEFFSISFPVTETFTLRG
VDPGDEAFVDTVIRSEEASLVDNRRIRFNITALFNILVVREEEVTVPVGVITPGVFPERRTVIVDRVVAEERTRVLARDQ
VTVPEGNPDIDRVIRATGQFIGGTVSAETASGGVFVDGEIAVNILYVADLPQQPVYFTSTVIDLNTFINIEGVTADMDAV
VDAEVVRVSASRVSARQINVRVVVELNLVVTERVRIPLVIRVGEEPADEEGFITYTVQPGDTLFLISRRYGVSIARLVEI
NNIADPDNLRVGQQLLIPAG

Sequences:

>Translated_500_residues
MPQQQLTVSEELARRVVDFEVVRNVGIPSELPPAERVVSANARLEITEATAGQGNVVINGIIRSTIFYASAEDPSNVVSI
RRNFNFTERVNIPGARPGAEVNVDASIGDIDFYVINNRLLGIEFVVVADLEITVPETVPVVEEPEEVEFRRRRIRIRRTI
VERNFVRELTSVERLPSDAEDIRRIIDVESTIQLIDIITGNNRVTIRGVVNNRILYVNRQGQLEFFSISFPVTETFTLRG
VDPGDEAFVDTVIRSEEASLVDNRRIRFNITALFNILVVREEEVTVPVGVITPGVFPERRTVIVDRVVAEERTRVLARDQ
VTVPEGNPDIDRVIRATGQFIGGTVSAETASGGVFVDGEIAVNILYVADLPQQPVYFTSTVIDLNTFINIEGVTADMDAV
VDAEVVRVSASRVSARQINVRVVVELNLVVTERVRIPLVIRVGEEPADEEGFITYTVQPGDTLFLISRRYGVSIARLVEI
NNIADPDNLRVGQQLLIPAG
>Mature_499_residues
PQQQLTVSEELARRVVDFEVVRNVGIPSELPPAERVVSANARLEITEATAGQGNVVINGIIRSTIFYASAEDPSNVVSIR
RNFNFTERVNIPGARPGAEVNVDASIGDIDFYVINNRLLGIEFVVVADLEITVPETVPVVEEPEEVEFRRRRIRIRRTIV
ERNFVRELTSVERLPSDAEDIRRIIDVESTIQLIDIITGNNRVTIRGVVNNRILYVNRQGQLEFFSISFPVTETFTLRGV
DPGDEAFVDTVIRSEEASLVDNRRIRFNITALFNILVVREEEVTVPVGVITPGVFPERRTVIVDRVVAEERTRVLARDQV
TVPEGNPDIDRVIRATGQFIGGTVSAETASGGVFVDGEIAVNILYVADLPQQPVYFTSTVIDLNTFINIEGVTADMDAVV
DAEVVRVSASRVSARQINVRVVVELNLVVTERVRIPLVIRVGEEPADEEGFITYTVQPGDTLFLISRRYGVSIARLVEIN
NIADPDNLRVGQQLLIPAG

Specific function: Unknown

COG id: COG1388

COG function: function code M; FOG: LysM repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55530; Mature: 55399

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
0.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQQQLTVSEELARRVVDFEVVRNVGIPSELPPAERVVSANARLEITEATAGQGNVVING
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHEECCCEEEEEECCCCCCCEEEEE
IIRSTIFYASAEDPSNVVSIRRNFNFTERVNIPGARPGAEVNVDASIGDIDFYVINNRLL
EEEEEEEEECCCCCCCEEEEEECCCEEEEECCCCCCCCCEEEEECEECCEEEEEECCEEE
GIEFVVVADLEITVPETVPVVEEPEEVEFRRRRIRIRRTIVERNFVRELTSVERLPSDAE
EEEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
DIRRIIDVESTIQLIDIITGNNRVTIRGVVNNRILYVNRQGQLEFFSISFPVTETFTLRG
HHHHHHCHHCEEEEEEEEECCCEEEEEEEECCEEEEEECCCCEEEEEEECCCEEEEEEEC
VDPGDEAFVDTVIRSEEASLVDNRRIRFNITALFNILVVREEEVTVPVGVITPGVFPERR
CCCCHHHHHHHHHCCCCCHHHCCCEEEEEEEEEEEEEEEECCCEEEEEEEECCCCCCCCC
TVIVDRVVAEERTRVLARDQVTVPEGNPDIDRVIRATGQFIGGTVSAETASGGVFVDGEI
EEEEHHHHHHHHHHEEECCEEECCCCCCCHHHHHHHCCHHCCCEEEECCCCCCEEEECEE
AVNILYVADLPQQPVYFTSTVIDLNTFINIEGVTADMDAVVDAEVVRVSASRVSARQINV
EEEEEEEECCCCCCEEEEEEEEEEEEEEEEEEEEECCHHHCCEEEEEEEHHHCEEEEEEE
RVVVELNLVVTERVRIPLVIRVGEEPADEEGFITYTVQPGDTLFLISRRYGVSIARLVEI
EEEEEEEEEEEECEEEEEEEEECCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEEEE
NNIADPDNLRVGQQLLIPAG
CCCCCCCCCCCCCEEEECCC
>Mature Secondary Structure 
PQQQLTVSEELARRVVDFEVVRNVGIPSELPPAERVVSANARLEITEATAGQGNVVING
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHEECCCEEEEEECCCCCCCEEEEE
IIRSTIFYASAEDPSNVVSIRRNFNFTERVNIPGARPGAEVNVDASIGDIDFYVINNRLL
EEEEEEEEECCCCCCCEEEEEECCCEEEEECCCCCCCCCEEEEECEECCEEEEEECCEEE
GIEFVVVADLEITVPETVPVVEEPEEVEFRRRRIRIRRTIVERNFVRELTSVERLPSDAE
EEEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
DIRRIIDVESTIQLIDIITGNNRVTIRGVVNNRILYVNRQGQLEFFSISFPVTETFTLRG
HHHHHHCHHCEEEEEEEEECCCEEEEEEEECCEEEEEECCCCEEEEEEECCCEEEEEEEC
VDPGDEAFVDTVIRSEEASLVDNRRIRFNITALFNILVVREEEVTVPVGVITPGVFPERR
CCCCHHHHHHHHHCCCCCHHHCCCEEEEEEEEEEEEEEEECCCEEEEEEEECCCCCCCCC
TVIVDRVVAEERTRVLARDQVTVPEGNPDIDRVIRATGQFIGGTVSAETASGGVFVDGEI
EEEEHHHHHHHHHHEEECCEEECCCCCCCHHHHHHHCCHHCCCEEEECCCCCCEEEECEE
AVNILYVADLPQQPVYFTSTVIDLNTFINIEGVTADMDAVVDAEVVRVSASRVSARQINV
EEEEEEEECCCCCCEEEEEEEEEEEEEEEEEEEEECCHHHCCEEEEEEEHHHCEEEEEEE
RVVVELNLVVTERVRIPLVIRVGEEPADEEGFITYTVQPGDTLFLISRRYGVSIARLVEI
EEEEEEEEEEEECEEEEEEEEECCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEEEE
NNIADPDNLRVGQQLLIPAG
CCCCCCCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA