| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932967
Identifier: 220932967
GI number: 220932967
Start: 2323954
End: 2324709
Strand: Reverse
Name: 220932967
Synonym: Hore_21350
Alternate gene names: NA
Gene position: 2324709-2323954 (Counterclockwise)
Preceding gene: 220932968
Following gene: 220932966
Centisome position: 90.17
GC content: 33.99
Gene sequence:
>756_bases ATGACTGTTGACGTTTTAATACTGGCTGGGGCACCTAATAAAGGAGCACTTAAAAAAATAACTCCTGAGGAACATGAAGC TTTAATAAAAATAAAAGATATGCCAATGGTCGAGTATGTCATTAAAGCTGTAAACAGGGCAACCCACACCGGTAAAGTGG TTGTAGTGGGTCCGCGGGAGCAACTTGAAGAATATGTTAATGAAAAAATTGATTTAATTGTAGATTCAGGCGACTCCCTG GTGGAAAATATTCAAAAAGGGTTTGAGGTATTAGATACCAGTAATCTTGTTTTATTAATGACTTCAGATATCCCTTTAAT TACTGAAGATGTCATCGATGAGTTTATATTATCCTGTAACAATGAAGAGGCAGATATCTATTATCCCATTATACCTAAAG AAAAAAATAAAGCTAAGTATCCCAATGTAAAAAGAACCTATGTTCATCTGGTTGAAGGGACTTTTACCGGAGGAAATATG GTGTTAATTAAACCGACGGTCTTACAAAATTCAATTGATTTATTAAGAAAAGCTGTTTTATGGCGGAAAAAACCCTGGAA ATTAAGCCAGATTCTTGGTATGAAGTTTATCTTTAAGTTTTTAATGGGTAACCTTTCTATAGAAGAAATACAGGAACGGG TTAAAGAGATTACAGGATATAAAGGAGTCGGTATGATTACTGAACACCCTGAGATAGGATTTGATGTCGATAAACCAAGT GATCTAAAATTAATGAGGGATAAATATATATTATAA
Upstream 100 bases:
>100_bases ACCGGGTTAGGTTTTTAATGATGTATCTTGTTTATTTTATTTAATGATTTTATTTGAGACATAATTAAATTTTTAAGGGT TGTGGCAGGGGGGAAGGAAA
Downstream 100 bases:
>100_bases AAATTGCAGACTTGGGGGGAAAACATGGAGGATTTCAAAAGAACCGAACGGCTTACAGCCCTGACCCAGATATTAGTAGA CAACCCATATACTCTGTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MTVDVLILAGAPNKGALKKITPEEHEALIKIKDMPMVEYVIKAVNRATHTGKVVVVGPREQLEEYVNEKIDLIVDSGDSL VENIQKGFEVLDTSNLVLLMTSDIPLITEDVIDEFILSCNNEEADIYYPIIPKEKNKAKYPNVKRTYVHLVEGTFTGGNM VLIKPTVLQNSIDLLRKAVLWRKKPWKLSQILGMKFIFKFLMGNLSIEEIQERVKEITGYKGVGMITEHPEIGFDVDKPS DLKLMRDKYIL
Sequences:
>Translated_251_residues MTVDVLILAGAPNKGALKKITPEEHEALIKIKDMPMVEYVIKAVNRATHTGKVVVVGPREQLEEYVNEKIDLIVDSGDSL VENIQKGFEVLDTSNLVLLMTSDIPLITEDVIDEFILSCNNEEADIYYPIIPKEKNKAKYPNVKRTYVHLVEGTFTGGNM VLIKPTVLQNSIDLLRKAVLWRKKPWKLSQILGMKFIFKFLMGNLSIEEIQERVKEITGYKGVGMITEHPEIGFDVDKPS DLKLMRDKYIL >Mature_250_residues TVDVLILAGAPNKGALKKITPEEHEALIKIKDMPMVEYVIKAVNRATHTGKVVVVGPREQLEEYVNEKIDLIVDSGDSLV ENIQKGFEVLDTSNLVLLMTSDIPLITEDVIDEFILSCNNEEADIYYPIIPKEKNKAKYPNVKRTYVHLVEGTFTGGNMV LIKPTVLQNSIDLLRKAVLWRKKPWKLSQILGMKFIFKFLMGNLSIEEIQERVKEITGYKGVGMITEHPEIGFDVDKPSD LKLMRDKYIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28471; Mature: 28340
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVDVLILAGAPNKGALKKITPEEHEALIKIKDMPMVEYVIKAVNRATHTGKVVVVGPRE CCEEEEEEECCCCCCCCCCCCCCHHHEEEEECCCCHHHHHHHHHHCCCCCCEEEEECCHH QLEEYVNEKIDLIVDSGDSLVENIQKGFEVLDTSNLVLLMTSDIPLITEDVIDEFILSCN HHHHHHCCCEEEEEECCHHHHHHHHHHHHEECCCCEEEEEECCCCCHHHHHHHHHHHHCC NEEADIYYPIIPKEKNKAKYPNVKRTYVHLVEGTFTGGNMVLIKPTVLQNSIDLLRKAVL CCCCEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEECHHHHHHHHHHHHHHH WRKKPWKLSQILGMKFIFKFLMGNLSIEEIQERVKEITGYKGVGMITEHPEIGFDVDKPS HCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCC DLKLMRDKYIL CHHHHHHCCCC >Mature Secondary Structure TVDVLILAGAPNKGALKKITPEEHEALIKIKDMPMVEYVIKAVNRATHTGKVVVVGPRE CEEEEEEECCCCCCCCCCCCCCHHHEEEEECCCCHHHHHHHHHHCCCCCCEEEEECCHH QLEEYVNEKIDLIVDSGDSLVENIQKGFEVLDTSNLVLLMTSDIPLITEDVIDEFILSCN HHHHHHCCCEEEEEECCHHHHHHHHHHHHEECCCCEEEEEECCCCCHHHHHHHHHHHHCC NEEADIYYPIIPKEKNKAKYPNVKRTYVHLVEGTFTGGNMVLIKPTVLQNSIDLLRKAVL CCCCEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEECHHHHHHHHHHHHHHH WRKKPWKLSQILGMKFIFKFLMGNLSIEEIQERVKEITGYKGVGMITEHPEIGFDVDKPS HCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCC DLKLMRDKYIL CHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA