| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
Click here to switch to the map view.
The map label for this gene is thrC [H]
Identifier: 220932942
GI number: 220932942
Start: 2290850
End: 2292256
Strand: Reverse
Name: thrC [H]
Synonym: Hore_21100
Alternate gene names: 220932942
Gene position: 2292256-2290850 (Counterclockwise)
Preceding gene: 220932943
Following gene: 220932941
Centisome position: 88.91
GC content: 47.48
Gene sequence:
>1407_bases ATGACAGCCACTGATTATAATTCAGTTATGGCCAGGAAAAATGATATAATGAAAAAGGCGGTGGGGATTGACTATAGCCG TTTCTCCAGGGGAAGGCTGGTTTTTGACTATGAACGGATGATGGAAGAGGTTGGTTATAGCCTGGAGGAAATAAAAAGGA TTCAGGCTGAAGTGGGAGTTGGGAATACTCCTCTTCTTGAACTAAAAAATATCACTGAGCTGGCCCGAAAACTGGCTCCC CAGGGAAAGGGTGCCAGGATATTTTTGAAGGATGAGGCCTCCAACCCTTCCGGTAGTTATAAAGCCAGGAGGGCGTCAGT CTCTGTTTATCATGCCCAGAAGCATGGTTACAGGGGGGTTGCTGCAGCCACCAGTGGTAACTACGGGGCAGCTGTAGCTT CCCAGGCAGCCATGAGGGGGCTGGACTGTATCATCGTCCAGGAGACCTTTGACAGCCGCGGGGTAGGCCAGCCAGAAATA CTGGAAAAGGGTAGGAAATGTGAGGCCTATGGGGCTGAAGTTATACAACTTTCAGTGGGCCCGGAACTTTTCTATATGTT TTTAAAGGTATTAGAAGAAACGGGTTATTTTAATGCCTCTTTATATACTCCCTTCGGTATTGCCGGAGTGGAGCCACTGG GTTTTGAAATTGTTACCCAGCTTAAAGAAAGGATTAACCGGGTCCCGGATGCAGTTGTCTGTACCCATGCCGGCGGAGGC AATTTAACGGGTACGGCCAGAGGCCTCAAAAAAGCAGGTTGTGACGAGACTGAAGTTATTGCAGCCAGTGTTGACCTCTA TGGGCTTCATATGGCCAGTGATACTGATTTTAATCTAAAATCTTTTACCACCGGGCATACCGGGTTTGGTATACCCTTTG CAACCTGGCCGGATCGAGCCGATGTACCCCGGAATGCAGCCAGGGCCCTGCGTTATATGGACCGGTATCTAACTGTAAAA CAGGGTGAGGTTTTCTATATAACCGAGGCCCTGGCCCAGCTTGAAGGTATCGAGAGAGGGCCGGCCGGGAACACTTCTCT GGCAGCTGCTTTTGCCCTGGCCCAGGAGATGGATGAAGACCAGGTAATAGTGGTTCAGGAGACTGAATACACCGGGGCCG GGAAACACCCCTATGCCCAGTTAAACTTTGCCCGGGAAAATGGTATTGAAGTTAAGAGGGGTAATCCCGATAAAGAAAAG GGCGGGGAATCAGTAATTATCCCTGAAGATCCGACCCAGATAAAGGTTCGTCCCCTGGATCTAAAGAAAATCAAGAAGTC TTATTTGAAGAATGTTATAAAAAGTATTGGTACTACAGAATTAACAGAAGAAGAAATTAAGTTTCTATCTGAAGAGATTA ATGAAAGCCAGTCAGTAGTGAAAAGGATGCTGGATGAGATAGAATAA
Upstream 100 bases:
>100_bases CGGACCCGTCTTATGAACATAAATTTGGCCGCCCTGTTCCTGAACTAATTCCTGTCGGCAGGGAACTCAGGGAAATACTT AAAAAAAGGGGGCTAAATAA
Downstream 100 bases:
>100_bases GGGGGTTCAGGTATGGATCTGGATCTATTAATAGCCGAAATAGGGAGCACAACGACCGTAGTTAACGGGTTTACCGGGAT AAAAAAGGGCACTCCCCGCT
Product: Cysteine synthase
Products: NA
Alternate protein names: TS [H]
Number of amino acids: Translated: 468; Mature: 467
Protein sequence:
>468_residues MTATDYNSVMARKNDIMKKAVGIDYSRFSRGRLVFDYERMMEEVGYSLEEIKRIQAEVGVGNTPLLELKNITELARKLAP QGKGARIFLKDEASNPSGSYKARRASVSVYHAQKHGYRGVAAATSGNYGAAVASQAAMRGLDCIIVQETFDSRGVGQPEI LEKGRKCEAYGAEVIQLSVGPELFYMFLKVLEETGYFNASLYTPFGIAGVEPLGFEIVTQLKERINRVPDAVVCTHAGGG NLTGTARGLKKAGCDETEVIAASVDLYGLHMASDTDFNLKSFTTGHTGFGIPFATWPDRADVPRNAARALRYMDRYLTVK QGEVFYITEALAQLEGIERGPAGNTSLAAAFALAQEMDEDQVIVVQETEYTGAGKHPYAQLNFARENGIEVKRGNPDKEK GGESVIIPEDPTQIKVRPLDLKKIKKSYLKNVIKSIGTTELTEEEIKFLSEEINESQSVVKRMLDEIE
Sequences:
>Translated_468_residues MTATDYNSVMARKNDIMKKAVGIDYSRFSRGRLVFDYERMMEEVGYSLEEIKRIQAEVGVGNTPLLELKNITELARKLAP QGKGARIFLKDEASNPSGSYKARRASVSVYHAQKHGYRGVAAATSGNYGAAVASQAAMRGLDCIIVQETFDSRGVGQPEI LEKGRKCEAYGAEVIQLSVGPELFYMFLKVLEETGYFNASLYTPFGIAGVEPLGFEIVTQLKERINRVPDAVVCTHAGGG NLTGTARGLKKAGCDETEVIAASVDLYGLHMASDTDFNLKSFTTGHTGFGIPFATWPDRADVPRNAARALRYMDRYLTVK QGEVFYITEALAQLEGIERGPAGNTSLAAAFALAQEMDEDQVIVVQETEYTGAGKHPYAQLNFARENGIEVKRGNPDKEK GGESVIIPEDPTQIKVRPLDLKKIKKSYLKNVIKSIGTTELTEEEIKFLSEEINESQSVVKRMLDEIE >Mature_467_residues TATDYNSVMARKNDIMKKAVGIDYSRFSRGRLVFDYERMMEEVGYSLEEIKRIQAEVGVGNTPLLELKNITELARKLAPQ GKGARIFLKDEASNPSGSYKARRASVSVYHAQKHGYRGVAAATSGNYGAAVASQAAMRGLDCIIVQETFDSRGVGQPEIL EKGRKCEAYGAEVIQLSVGPELFYMFLKVLEETGYFNASLYTPFGIAGVEPLGFEIVTQLKERINRVPDAVVCTHAGGGN LTGTARGLKKAGCDETEVIAASVDLYGLHMASDTDFNLKSFTTGHTGFGIPFATWPDRADVPRNAARALRYMDRYLTVKQ GEVFYITEALAQLEGIERGPAGNTSLAAAFALAQEMDEDQVIVVQETEYTGAGKHPYAQLNFARENGIEVKRGNPDKEKG GESVIIPEDPTQIKVRPLDLKKIKKSYLKNVIKSIGTTELTEEEIKFLSEEINESQSVVKRMLDEIE
Specific function: Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine [H]
COG id: COG0498
COG function: function code E; Threonine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the threonine synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR004450 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =4.2.3.1 [H]
Molecular weight: Translated: 51457; Mature: 51326
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATDYNSVMARKNDIMKKAVGIDYSRFSRGRLVFDYERMMEEVGYSLEEIKRIQAEVGV CCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEHHHHHHHHHCCCHHHHHHHHHHCCC GNTPLLELKNITELARKLAPQGKGARIFLKDEASNPSGSYKARRASVSVYHAQKHGYRGV CCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHEEEEEEHHHCCCCCE AAATSGNYGAAVASQAAMRGLDCIIVQETFDSRGVGQPEILEKGRKCEAYGAEVIQLSVG EEECCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHCCCCCCCCCCEEEEEECC PELFYMFLKVLEETGYFNASLYTPFGIAGVEPLGFEIVTQLKERINRVPDAVVCTHAGGG HHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCC NLTGTARGLKKAGCDETEVIAASVDLYGLHMASDTDFNLKSFTTGHTGFGIPFATWPDRA CCCHHHHHHHHCCCCCHHEEEEEEEEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCC DVPRNAARALRYMDRYLTVKQGEVFYITEALAQLEGIERGPAGNTSLAAAFALAQEMDED CCCHHHHHHHHHHHHHHEEECCCEEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC QVIVVQETEYTGAGKHPYAQLNFARENGIEVKRGNPDKEKGGESVIIPEDPTQIKVRPLD CEEEEEECCCCCCCCCCCEEEEEHHHCCEEEECCCCCHHHCCCEEEECCCCCEEEEECCC LKKIKKSYLKNVIKSIGTTELTEEEIKFLSEEINESQSVVKRMLDEIE HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCC >Mature Secondary Structure TATDYNSVMARKNDIMKKAVGIDYSRFSRGRLVFDYERMMEEVGYSLEEIKRIQAEVGV CCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEHHHHHHHHHCCCHHHHHHHHHHCCC GNTPLLELKNITELARKLAPQGKGARIFLKDEASNPSGSYKARRASVSVYHAQKHGYRGV CCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHEEEEEEHHHCCCCCE AAATSGNYGAAVASQAAMRGLDCIIVQETFDSRGVGQPEILEKGRKCEAYGAEVIQLSVG EEECCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHCCCCCCCCCCEEEEEECC PELFYMFLKVLEETGYFNASLYTPFGIAGVEPLGFEIVTQLKERINRVPDAVVCTHAGGG HHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCC NLTGTARGLKKAGCDETEVIAASVDLYGLHMASDTDFNLKSFTTGHTGFGIPFATWPDRA CCCHHHHHHHHCCCCCHHEEEEEEEEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCC DVPRNAARALRYMDRYLTVKQGEVFYITEALAQLEGIERGPAGNTSLAAAFALAQEMDED CCCHHHHHHHHHHHHHHEEECCCEEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC QVIVVQETEYTGAGKHPYAQLNFARENGIEVKRGNPDKEKGGESVIIPEDPTQIKVRPLD CEEEEEECCCCCCCCCCCEEEEEHHHCCEEEECCCCCHHHCCCEEEECCCCCEEEEECCC LKKIKKSYLKNVIKSIGTTELTEEEIKFLSEEINESQSVVKRMLDEIE HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]