| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is malG [C]
Identifier: 220932917
GI number: 220932917
Start: 2258392
End: 2259258
Strand: Reverse
Name: malG [C]
Synonym: Hore_20850
Alternate gene names: 220932917
Gene position: 2259258-2258392 (Counterclockwise)
Preceding gene: 220932918
Following gene: 220932916
Centisome position: 87.63
GC content: 40.83
Gene sequence:
>867_bases ATGACTAAACTAAAAAATCTATCACTTAAGAAGGTAGTATTTTATCTGGTTTTGACTGTGGTAATTTTCTATCTGCTTTT CCCTTTTTACTGGGCTGTTAATACTTCTTTTAAGTCAGAAGCCCAGTTGTCTATGACCCCGGCAACTTTTTTACCTGTTG ATCCTGAAACAGGAGAGGTTTCTTTTTATCTCCGTAATTATGAAGCGGTCTTTGAGGATGACCAGTTTATGAGGGGACTT TTAAATAGTACCATTGTAGCCGGTTTTACAACTTTACTTGCTTTACTTGTTGGTTCCTTTGCGGCCTTTGCCCTGGGTAA ACTCAGGTTTAAGGGGAAACGGCCTTCCCTTTATGTAATACTGGCCATGACCATGTTTCCTCAGGTGACGGTACTTTCAG GGTTATATGCTGTTATCAATTACCTGAATCTTGATGCGATTTTAAGTATGATTTTAAGTTACATGCTTTTTACCTTACCT TTTACAACCTGGGTTATGACTGCCTTTTTTAAGGATTTACCTATTGAGATTATGCAATCAGCCCAGGTGGATGGGGCTAC CCCCTTCCAGACATTCAGGATGATTCTCTTACCACTTACAGCTCCGGCATTAGTTACTACCGGGTTACTTTCTTTTATTG CAGCCTGGAATGAATATCTTTTTGCCCTGACCTTTACTTCAATAGATGTTAAGGCCAGGACAGTTCCGGTTGCTATTCAG TATTTTGCTGGTAATTTTGCCCGTCAGGAACCCTTCGGGGAGCGGATGGCAGCAGCAGTAATTGTAACTATCCCTATTGT AATCCTGGTTTTAATCTTCCAGAGGAAGATAGTCCAGGGTTTAACTGCAGGAGCAGTCAAAGGTTAA
Upstream 100 bases:
>100_bases GCCCGTAATATGGGACTGGCATCTGCCATCGGGGTAATAATTTTTATCCTGATCTTTATCTTTGCTATTGTCTACATCAG GATGCTAGGAGTTGATGCTG
Downstream 100 bases:
>100_bases TATATATTTCAGAGCTACCCCATAGGGAATTTAAAAAAGGCTAAAAAACCTTAAGAGGTGGGGAGCAGGATGAAGAAGAT CAGTTATAAAATAATGGCTG
Product: binding-protein-dependent transport systems inner membrane component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MTKLKNLSLKKVVFYLVLTVVIFYLLFPFYWAVNTSFKSEAQLSMTPATFLPVDPETGEVSFYLRNYEAVFEDDQFMRGL LNSTIVAGFTTLLALLVGSFAAFALGKLRFKGKRPSLYVILAMTMFPQVTVLSGLYAVINYLNLDAILSMILSYMLFTLP FTTWVMTAFFKDLPIEIMQSAQVDGATPFQTFRMILLPLTAPALVTTGLLSFIAAWNEYLFALTFTSIDVKARTVPVAIQ YFAGNFARQEPFGERMAAAVIVTIPIVILVLIFQRKIVQGLTAGAVKG
Sequences:
>Translated_288_residues MTKLKNLSLKKVVFYLVLTVVIFYLLFPFYWAVNTSFKSEAQLSMTPATFLPVDPETGEVSFYLRNYEAVFEDDQFMRGL LNSTIVAGFTTLLALLVGSFAAFALGKLRFKGKRPSLYVILAMTMFPQVTVLSGLYAVINYLNLDAILSMILSYMLFTLP FTTWVMTAFFKDLPIEIMQSAQVDGATPFQTFRMILLPLTAPALVTTGLLSFIAAWNEYLFALTFTSIDVKARTVPVAIQ YFAGNFARQEPFGERMAAAVIVTIPIVILVLIFQRKIVQGLTAGAVKG >Mature_287_residues TKLKNLSLKKVVFYLVLTVVIFYLLFPFYWAVNTSFKSEAQLSMTPATFLPVDPETGEVSFYLRNYEAVFEDDQFMRGLL NSTIVAGFTTLLALLVGSFAAFALGKLRFKGKRPSLYVILAMTMFPQVTVLSGLYAVINYLNLDAILSMILSYMLFTLPF TTWVMTAFFKDLPIEIMQSAQVDGATPFQTFRMILLPLTAPALVTTGLLSFIAAWNEYLFALTFTSIDVKARTVPVAIQY FAGNFARQEPFGERMAAAVIVTIPIVILVLIFQRKIVQGLTAGAVKG
Specific function: Part Of The Binding-Protein-Dependent Transport System For Maltose; Probably Responsible For The Translocation Of The Substrate Across The Membrane. [C]
COG id: COG0395
COG function: function code G; ABC-type sugar transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790464, Length=216, Percent_Identity=35.6481481481481, Blast_Score=111, Evalue=6e-26, Organism=Escherichia coli, GI1787571, Length=291, Percent_Identity=30.9278350515464, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI1789860, Length=290, Percent_Identity=27.2413793103448, Blast_Score=85, Evalue=6e-18, Organism=Escherichia coli, GI1787368, Length=159, Percent_Identity=26.4150943396226, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 32101; Mature: 31969
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLKNLSLKKVVFYLVLTVVIFYLLFPFYWAVNTSFKSEAQLSMTPATFLPVDPETGEV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEECCCCCCCCE SFYLRNYEAVFEDDQFMRGLLNSTIVAGFTTLLALLVGSFAAFALGKLRFKGKRPSLYVI EEEEECHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE LAMTMFPQVTVLSGLYAVINYLNLDAILSMILSYMLFTLPFTTWVMTAFFKDLPIEIMQS EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH AQVDGATPFQTFRMILLPLTAPALVTTGLLSFIAAWNEYLFALTFTSIDVKARTVPVAIQ CCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEHHHHHHHH YFAGNFARQEPFGERMAAAVIVTIPIVILVLIFQRKIVQGLTAGAVKG HHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TKLKNLSLKKVVFYLVLTVVIFYLLFPFYWAVNTSFKSEAQLSMTPATFLPVDPETGEV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEECCCCCCCCE SFYLRNYEAVFEDDQFMRGLLNSTIVAGFTTLLALLVGSFAAFALGKLRFKGKRPSLYVI EEEEECHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE LAMTMFPQVTVLSGLYAVINYLNLDAILSMILSYMLFTLPFTTWVMTAFFKDLPIEIMQS EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH AQVDGATPFQTFRMILLPLTAPALVTTGLLSFIAAWNEYLFALTFTSIDVKARTVPVAIQ CCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEHHHHHHHH YFAGNFARQEPFGERMAAAVIVTIPIVILVLIFQRKIVQGLTAGAVKG HHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8920183 [H]