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The map label for this gene is recR

Identifier: 220932909

GI number: 220932909

Start: 2245414

End: 2246010

Strand: Reverse

Name: recR

Synonym: Hore_20770

Alternate gene names: 220932909

Gene position: 2246010-2245414 (Counterclockwise)

Preceding gene: 220932910

Following gene: 220932908

Centisome position: 87.12

GC content: 44.22

Gene sequence:

>597_bases
ATGCGTTATTATCCCCAGCCTATGGGGAAATTAATTAATCAATTGAGCAGGCTGCCAGGAATTGGACCAAAAACTGCCCA
GCGCCTGGCTTTTTATATCCTGAGATTAAACCCTTCAGAGGTAAGGGAGCTCTCCCAGTCCATGATTGATGCCAGGGAGA
AAACAAAGTATTGTTCTGTCTGTAATAATTTAACCGAAAAGGACCCCTGTGACTTCTGTTCCTCACCCGAAAGGGACCAT
AATTTAATATGTGTGGTTGAAAGTCCTAAAGACGTTATTGCCATGGAAAGAACAGGGGAATACAAAGGTTTATATCATGT
GTTACATGGATCTATTTCTCCCATAGATGGAATTGGACCAGAGGATATAAAAATTAGAAACCTCCTTCCCCGCTTGAAAG
AGGGGGTAAAAGAGGTTATAGTGGCTACTGATCCCAATGCTGAGGGTGATGCTACTGCTATGTATCTGGCCAGGTTAATA
AAACCTCTGGGGGTAAAAGTCACCAGGATTGCCCACGGGCTCCCGGTAGGTGGTGACCTGGAATATGCTGATGAGGTTAC
CCTGTCTAAAGCATTAGAAGGGAGACGAGAAATGTGA

Upstream 100 bases:

>100_bases
TCCTGGCTGCTGTTAATGAAGGGATGAGAAAGGTAACCGATATGGTCAATAAAGAAATGGGCAAAATCACCGGTGGGATG
AATATCCCGGGGATGTTCTA

Downstream 100 bases:

>100_bases
TATAGATGTCTGGTAATTGCCAGGCATCTTTTTTTAGCGGTAATTATATTCTCTTAATTTTAGTCATTATATATAAATAT
AGTCATTATATATAAATATT

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MRYYPQPMGKLINQLSRLPGIGPKTAQRLAFYILRLNPSEVRELSQSMIDAREKTKYCSVCNNLTEKDPCDFCSSPERDH
NLICVVESPKDVIAMERTGEYKGLYHVLHGSISPIDGIGPEDIKIRNLLPRLKEGVKEVIVATDPNAEGDATAMYLARLI
KPLGVKVTRIAHGLPVGGDLEYADEVTLSKALEGRREM

Sequences:

>Translated_198_residues
MRYYPQPMGKLINQLSRLPGIGPKTAQRLAFYILRLNPSEVRELSQSMIDAREKTKYCSVCNNLTEKDPCDFCSSPERDH
NLICVVESPKDVIAMERTGEYKGLYHVLHGSISPIDGIGPEDIKIRNLLPRLKEGVKEVIVATDPNAEGDATAMYLARLI
KPLGVKVTRIAHGLPVGGDLEYADEVTLSKALEGRREM
>Mature_198_residues
MRYYPQPMGKLINQLSRLPGIGPKTAQRLAFYILRLNPSEVRELSQSMIDAREKTKYCSVCNNLTEKDPCDFCSSPERDH
NLICVVESPKDVIAMERTGEYKGLYHVLHGSISPIDGIGPEDIKIRNLLPRLKEGVKEVIVATDPNAEGDATAMYLARLI
KPLGVKVTRIAHGLPVGGDLEYADEVTLSKALEGRREM

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=193, Percent_Identity=47.1502590673575, Blast_Score=184, Evalue=5e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_HALOH (B8CZX0)

Other databases:

- EMBL:   CP001098
- RefSeq:   YP_002509817.1
- GeneID:   7314401
- GenomeReviews:   CP001098_GR
- KEGG:   hor:Hore_20770
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- HAMAP:   MF_00017
- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- SMART:   SM00278
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF02132 RecR; PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 22050; Mature: 22050

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYYPQPMGKLINQLSRLPGIGPKTAQRLAFYILRLNPSEVRELSQSMIDAREKTKYCSV
CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
CNNLTEKDPCDFCSSPERDHNLICVVESPKDVIAMERTGEYKGLYHVLHGSISPIDGIGP
HHCCCCCCCCCCCCCCCCCCCEEEEEECCCHHEEHHCCCCHHHHHHHHHCCCCCCCCCCC
EDIKIRNLLPRLKEGVKEVIVATDPNAEGDATAMYLARLIKPLGVKVTRIAHGLPVGGDL
CCHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCC
EYADEVTLSKALEGRREM
CHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRYYPQPMGKLINQLSRLPGIGPKTAQRLAFYILRLNPSEVRELSQSMIDAREKTKYCSV
CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
CNNLTEKDPCDFCSSPERDHNLICVVESPKDVIAMERTGEYKGLYHVLHGSISPIDGIGP
HHCCCCCCCCCCCCCCCCCCCEEEEEECCCHHEEHHCCCCHHHHHHHHHCCCCCCCCCCC
EDIKIRNLLPRLKEGVKEVIVATDPNAEGDATAMYLARLIKPLGVKVTRIAHGLPVGGDL
CCHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCC
EYADEVTLSKALEGRREM
CHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA