| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932908
Identifier: 220932908
GI number: 220932908
Start: 2244671
End: 2245114
Strand: Reverse
Name: 220932908
Synonym: Hore_20760
Alternate gene names: NA
Gene position: 2245114-2244671 (Counterclockwise)
Preceding gene: 220932909
Following gene: 220932907
Centisome position: 87.08
GC content: 40.77
Gene sequence:
>444_bases TTGTTAGGATATTCATGGCTTTACCTGCTGCTGGCAGCCATGGCCGGTTTAACAATGGCGGTACAGGGGTCGATTAATTC GGTCCTTGGCAAAAAAATTGGGCTTATGGAGACCAATTTTATTGTCCATGCTACTGCAGCTATTATTCTTTTAATATACT TTATATTTAACTTTGAAAATGGAAATTTTAATTCATGGAAGGGTGCCCCCTGGTTTTTATATATTGGGGGTGTTCTGGGG ATTGCCATTACCTATCTGGTGATGGTTAGTATTCCTGAACTGGGAGTAGCCGTAGCTACCACTTCCATTGTTACTGCCCA GGTTTTAACAGCAGCCTGTATAGATCATTTCGGTTTATTTGGACTGGAACAGGTTCCTTTTACCTGGGTAAAGTTTGTGG GTGTTCTTTTTTTAGCTGCTGGAGTCCGTTTGCTATTAAATTAA
Upstream 100 bases:
>100_bases CGGTATTTTCCGTCATGGAAAATACCGTTTTTTTCATTTATGACTGAATAAACGGGCTTTATAATGTCAAGACTAATAAG GTAGGAATGGAGGTGTCCTC
Downstream 100 bases:
>100_bases TAACAACGTTAACGTCGGGAGGGTTTGGTATGCTTAAAGAAAAATTAATGGATGTTTTCAAAAAAAGGTATTACAGGTTC CGGAATAATGTTAAACCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MLGYSWLYLLLAAMAGLTMAVQGSINSVLGKKIGLMETNFIVHATAAIILLIYFIFNFENGNFNSWKGAPWFLYIGGVLG IAITYLVMVSIPELGVAVATTSIVTAQVLTAACIDHFGLFGLEQVPFTWVKFVGVLFLAAGVRLLLN
Sequences:
>Translated_147_residues MLGYSWLYLLLAAMAGLTMAVQGSINSVLGKKIGLMETNFIVHATAAIILLIYFIFNFENGNFNSWKGAPWFLYIGGVLG IAITYLVMVSIPELGVAVATTSIVTAQVLTAACIDHFGLFGLEQVPFTWVKFVGVLFLAAGVRLLLN >Mature_147_residues MLGYSWLYLLLAAMAGLTMAVQGSINSVLGKKIGLMETNFIVHATAAIILLIYFIFNFENGNFNSWKGAPWFLYIGGVLG IAITYLVMVSIPELGVAVATTSIVTAQVLTAACIDHFGLFGLEQVPFTWVKFVGVLFLAAGVRLLLN
Specific function: Unknown
COG id: COG3238
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15879; Mature: 15879
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGYSWLYLLLAAMAGLTMAVQGSINSVLGKKIGLMETNFIVHATAAIILLIYFIFNFEN CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC GNFNSWKGAPWFLYIGGVLGIAITYLVMVSIPELGVAVATTSIVTAQVLTAACIDHFGLF CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC GLEQVPFTWVKFVGVLFLAAGVRLLLN CCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLGYSWLYLLLAAMAGLTMAVQGSINSVLGKKIGLMETNFIVHATAAIILLIYFIFNFEN CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC GNFNSWKGAPWFLYIGGVLGIAITYLVMVSIPELGVAVATTSIVTAQVLTAACIDHFGLF CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC GLEQVPFTWVKFVGVLFLAAGVRLLLN CCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA