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The map label for this gene is 220932890

Identifier: 220932890

GI number: 220932890

Start: 2224333

End: 2225280

Strand: Reverse

Name: 220932890

Synonym: Hore_20580

Alternate gene names: NA

Gene position: 2225280-2224333 (Counterclockwise)

Preceding gene: 220932891

Following gene: 220932889

Centisome position: 86.31

GC content: 40.51

Gene sequence:

>948_bases
ATGAAAGATACCTATACAAATCCAGTTGGTGGGATAACCGGTATTGGTGATCCCTATGTCTTAAAACATGAATCACGGTA
TTATCTTTACGCTACTTCAGCAATTAACCGGGGCTTTAAGGTCTGGGAATCACCAAACCTGGTTGACTGGGAATTAAAGG
GGTTGGCCCTGGATTCTTATTATGAAAAAAATGGCTGGGGAACAGAAGATTTCTGGGCCCCTGAGGTTATTTTTTATAAT
AATAAATTTTATATGACATATAGTGCCAGGGATAATGATGGTCATTTAAAGATAGCTCTTGCTAGTAGCAAAAGTCCTCT
GGGCCCTTTTAAAAATATTAAAGCTCCTCTTTTTGACCGTGGCTTATCCTTCATAGACGCCCATATATTTATAGATCAAG
ATGGCACCCCGTACATTTATTACGTCAAGGATTGTTCTGAAAATATTATCAATGGTATTCATATAAGTCAAATTTATGTA
CAGGAAATGAGCCAGGACCTTCTCGAATTAAAAGGTGACCCGGTTTTAGCAATTCAACCAAGTCAGGACTGGGAGGGGAT
AAATGATGCCTGGCAGTGGAATGAAGGCCCCTTTGTCATTAAACATGAAGGTAAGTACTATATGATGTATTCAGCTAATT
GTTACGCATCCCCGGATTATTCGATTGGTTATGCTGTGGCAGAAACCCCCTTGGGTCCCTGGATAAAATATAGTGGTAAC
CCCATATTATCGAAAAGGATGGACAAAGGCATTTCAGGGCCAGGCCATAACAGCGTAACCGTATCACCAGACGGCAGTGA
ATTATTTGTTGTATATCACACCCATACCTATCCCGATTCACCGGGTGGGGATAGGACGGTTAACATTGACAGATTATATT
TTGAAGATGGAATATTAAAAGTAAAAGGTCCAACAAGGTCACCACAACCAGGACCGCGGAGTAATTAA

Upstream 100 bases:

>100_bases
TGAAAGTTTTTAAGCAATAGGGAACCACCAATTATTTTTGTAAACCTGATGCAAGTACTTTAGTTATGGATATAAAGCAT
ATAAAAAGGAGAGGTTATAA

Downstream 100 bases:

>100_bases
TTTTTATAACATATAAATTAAAATACAAAAATTTAAGAAAGATACTTTATAGAAGGATTTAATTGTAAAAGTCAAAAACG
AAATAAACTATAAATTGTTA

Product: glycoside hydrolase family 43

Products: NA

Alternate protein names: Alpha-N-Arabinofuranosidase; Endo-1 4-Beta-Xylanase; Beta-Xylosidase; Glycoside Hydrolase Family Protein; Glycosyl Hydrolase Family; Family; Arabinan Endo-1 5-Alpha-L-Arabinosidase A; Hydrolase; Glycoside Hydrolase; Endo-1 4-Beta-Xylanase D; Glycoside Hydrolase Family Beta-Glycosidase; Beta-Xylosidase/Alpha-L-Arabinfuranosidase; Alpha-Arabinofuranosidase II; Glycosyl Hydrolase; Arabinan Endo-1 5-Alpha-L-Arabinosidase; Xylan 1 4-Beta-Xylosidase; Alpha-L-Arabinofuranosidase; Exo-Alpha-L-Arabinofuranosidase II; Xylosidase/Arabinofuranosidase; Endo-Arabinase; Xylosidase; Xylosidase/Arabinosidase; Glycosy Hydrolase Family Protein; Glycosyl Hydrolases; Exported Endo-Arabinase; Beta-Fructosidase Superfamily Protein; Aldose 1-Epimerase; Xylosidase Glycosyl Hydrolase Family Protein; Exported Glycosylhydrolase; LPXTG-Motif Cell Wall Anchor Domain Protein; F5/8 Type C Domain-Containing Protein; Glycosyl Hydrolases Family; Alpha-N-Arabinofuranosidase II; Methionine Biosynthesis MetW

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MKDTYTNPVGGITGIGDPYVLKHESRYYLYATSAINRGFKVWESPNLVDWELKGLALDSYYEKNGWGTEDFWAPEVIFYN
NKFYMTYSARDNDGHLKIALASSKSPLGPFKNIKAPLFDRGLSFIDAHIFIDQDGTPYIYYVKDCSENIINGIHISQIYV
QEMSQDLLELKGDPVLAIQPSQDWEGINDAWQWNEGPFVIKHEGKYYMMYSANCYASPDYSIGYAVAETPLGPWIKYSGN
PILSKRMDKGISGPGHNSVTVSPDGSELFVVYHTHTYPDSPGGDRTVNIDRLYFEDGILKVKGPTRSPQPGPRSN

Sequences:

>Translated_315_residues
MKDTYTNPVGGITGIGDPYVLKHESRYYLYATSAINRGFKVWESPNLVDWELKGLALDSYYEKNGWGTEDFWAPEVIFYN
NKFYMTYSARDNDGHLKIALASSKSPLGPFKNIKAPLFDRGLSFIDAHIFIDQDGTPYIYYVKDCSENIINGIHISQIYV
QEMSQDLLELKGDPVLAIQPSQDWEGINDAWQWNEGPFVIKHEGKYYMMYSANCYASPDYSIGYAVAETPLGPWIKYSGN
PILSKRMDKGISGPGHNSVTVSPDGSELFVVYHTHTYPDSPGGDRTVNIDRLYFEDGILKVKGPTRSPQPGPRSN
>Mature_315_residues
MKDTYTNPVGGITGIGDPYVLKHESRYYLYATSAINRGFKVWESPNLVDWELKGLALDSYYEKNGWGTEDFWAPEVIFYN
NKFYMTYSARDNDGHLKIALASSKSPLGPFKNIKAPLFDRGLSFIDAHIFIDQDGTPYIYYVKDCSENIINGIHISQIYV
QEMSQDLLELKGDPVLAIQPSQDWEGINDAWQWNEGPFVIKHEGKYYMMYSANCYASPDYSIGYAVAETPLGPWIKYSGN
PILSKRMDKGISGPGHNSVTVSPDGSELFVVYHTHTYPDSPGGDRTVNIDRLYFEDGILKVKGPTRSPQPGPRSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35534; Mature: 35534

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDTYTNPVGGITGIGDPYVLKHESRYYLYATSAINRGFKVWESPNLVDWELKGLALDSY
CCCCCCCCCCCCCCCCCCEEEEECCEEEEEEECCCCCCEEEECCCCEEEEEEEEEEEECE
YEKNGWGTEDFWAPEVIFYNNKFYMTYSARDNDGHLKIALASSKSPLGPFKNIKAPLFDR
ECCCCCCCCCCCCCEEEEECCEEEEEEECCCCCCEEEEEEECCCCCCCCHHCCCCCHHHC
GLSFIDAHIFIDQDGTPYIYYVKDCSENIINGIHISQIYVQEMSQDLLELKGDPVLAIQP
CCCEEEEEEEECCCCCEEEEEEECCCCHHHCCEEEHHHHHHHHHHHHHHHCCCEEEEEEC
SQDWEGINDAWQWNEGPFVIKHEGKYYMMYSANCYASPDYSIGYAVAETPLGPWIKYSGN
CCCCCCCCCCEECCCCCEEEEECCCEEEEEECCEECCCCCCEEEEEECCCCCCCEEECCC
PILSKRMDKGISGPGHNSVTVSPDGSELFVVYHTHTYPDSPGGDRTVNIDRLYFEDGILK
CHHHHHHHCCCCCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEEECCEEE
VKGPTRSPQPGPRSN
EECCCCCCCCCCCCC
>Mature Secondary Structure
MKDTYTNPVGGITGIGDPYVLKHESRYYLYATSAINRGFKVWESPNLVDWELKGLALDSY
CCCCCCCCCCCCCCCCCCEEEEECCEEEEEEECCCCCCEEEECCCCEEEEEEEEEEEECE
YEKNGWGTEDFWAPEVIFYNNKFYMTYSARDNDGHLKIALASSKSPLGPFKNIKAPLFDR
ECCCCCCCCCCCCCEEEEECCEEEEEEECCCCCCEEEEEEECCCCCCCCHHCCCCCHHHC
GLSFIDAHIFIDQDGTPYIYYVKDCSENIINGIHISQIYVQEMSQDLLELKGDPVLAIQP
CCCEEEEEEEECCCCCEEEEEEECCCCHHHCCEEEHHHHHHHHHHHHHHHCCCEEEEEEC
SQDWEGINDAWQWNEGPFVIKHEGKYYMMYSANCYASPDYSIGYAVAETPLGPWIKYSGN
CCCCCCCCCCEECCCCCEEEEECCCEEEEEECCEECCCCCCEEEEEECCCCCCCEEECCC
PILSKRMDKGISGPGHNSVTVSPDGSELFVVYHTHTYPDSPGGDRTVNIDRLYFEDGILK
CHHHHHHHCCCCCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEEECCEEE
VKGPTRSPQPGPRSN
EECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA