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The map label for this gene is ybaC [H]

Identifier: 220932889

GI number: 220932889

Start: 2222637

End: 2223728

Strand: Reverse

Name: ybaC [H]

Synonym: Hore_20570

Alternate gene names: 220932889

Gene position: 2223728-2222637 (Counterclockwise)

Preceding gene: 220932890

Following gene: 220932888

Centisome position: 86.25

GC content: 36.54

Gene sequence:

>1092_bases
ATGAAAAAATCAATTAATAAAAGAAAGGTAGTTATGTCTATGACTGTTATCGTTATTGCTTTAATAGGATTGATGTTTAT
TATGCCAGCAGGTACTGAACCAATTCTGGATGCCAATGGAGAGGTTATTCCTGGAAGTATTGCAACAATGGAGAAAATTG
AGCTGGGTGGAGTGGAACAGTGGGTAGTTATTAGGGGTAAAAGTGTTAATAATCCAATTTTATTACTTCTTTCCGGTGGG
CCAGGAGCCAGTGAAATGGGAAGGTTTTTAAAGTATAATAAGGATTTAGAAGATGACTTTATAGTGGTCAACTGGGAGCA
AAGAGGGTGTGGAAAATCCTATCCTGCAATAAAAGATAAAGAGTCTATGACTGTTGAACAATATGTTGCAGATATTAATG
AATTGACCGGGTATCTTAAAAAGAGGTTTAATAAAGAGAAAATATATTTATTAGGTCATTCCTGGGGAACAATCATTGGT
ACAATGGCTGTTCAGAAATTCCCTGACCAATTCTATGCTTATATTGGTGCTGCCCAGATGGTAAATATCGCAAAAACAGA
CCAATATATGTACCGCTATGTTCTAAATGCAGCCCGGAAGGCCGGTGATGATAAATTAGTTAGTAAATTAATGGCATCAG
GTGAACCCCCTTATTATGGAGAGGGGATGCTAAATAAATATAGACTTTTTCTGACCAGTTATGCCGGTTATTATAGGGCT
GAAAATCCCTTTAATGAAAAGAATAGGGAGTGGTATACCCTGAGTAGTATGATAATGCTCAAGGAATATTCCTGGCTGGA
CAGGATAAGGTATTTTCAGGGTTTACTCAAGACATATCCTCTAGTGTATTCCCAGTTACAGGATATAAATTTTGTTACAC
AGGCAAATAGACTTGAAATTCCAGTCTACTATCTGATAGGAAAGCATGATTATACTGCCAAATTTATCGAAGAGTATTAT
CAAAACCTGCAGGCTCCCAGTAAAGAATTAATCTGGTTTGAGCATTCAGCCCATGGGGAAATATGGACCGAACCAGACAA
ATTTCATGACATTATGGTAAATAAAGTATTACCAGAAACCTATTTCAATTAA

Upstream 100 bases:

>100_bases
GAGAAGGAGTATCTGGAAACGGGTAGTGGCGTTTATTCTAATAAAATTATGGATAGCTTTTTTAATACTACTAAAATTAT
AATTAATATCGGGGGTTAAC

Downstream 100 bases:

>100_bases
AGAAGGTGGATTTTATGAATTTAAAGGATTTAAAATTGATCTCTGATTATAAAAATAATGATATTTTAAGAAAAAGTTTC
AATGATCTGGCCAAAAGGGT

Product: alpha/beta hydrolase fold protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MKKSINKRKVVMSMTVIVIALIGLMFIMPAGTEPILDANGEVIPGSIATMEKIELGGVEQWVVIRGKSVNNPILLLLSGG
PGASEMGRFLKYNKDLEDDFIVVNWEQRGCGKSYPAIKDKESMTVEQYVADINELTGYLKKRFNKEKIYLLGHSWGTIIG
TMAVQKFPDQFYAYIGAAQMVNIAKTDQYMYRYVLNAARKAGDDKLVSKLMASGEPPYYGEGMLNKYRLFLTSYAGYYRA
ENPFNEKNREWYTLSSMIMLKEYSWLDRIRYFQGLLKTYPLVYSQLQDINFVTQANRLEIPVYYLIGKHDYTAKFIEEYY
QNLQAPSKELIWFEHSAHGEIWTEPDKFHDIMVNKVLPETYFN

Sequences:

>Translated_363_residues
MKKSINKRKVVMSMTVIVIALIGLMFIMPAGTEPILDANGEVIPGSIATMEKIELGGVEQWVVIRGKSVNNPILLLLSGG
PGASEMGRFLKYNKDLEDDFIVVNWEQRGCGKSYPAIKDKESMTVEQYVADINELTGYLKKRFNKEKIYLLGHSWGTIIG
TMAVQKFPDQFYAYIGAAQMVNIAKTDQYMYRYVLNAARKAGDDKLVSKLMASGEPPYYGEGMLNKYRLFLTSYAGYYRA
ENPFNEKNREWYTLSSMIMLKEYSWLDRIRYFQGLLKTYPLVYSQLQDINFVTQANRLEIPVYYLIGKHDYTAKFIEEYY
QNLQAPSKELIWFEHSAHGEIWTEPDKFHDIMVNKVLPETYFN
>Mature_363_residues
MKKSINKRKVVMSMTVIVIALIGLMFIMPAGTEPILDANGEVIPGSIATMEKIELGGVEQWVVIRGKSVNNPILLLLSGG
PGASEMGRFLKYNKDLEDDFIVVNWEQRGCGKSYPAIKDKESMTVEQYVADINELTGYLKKRFNKEKIYLLGHSWGTIIG
TMAVQKFPDQFYAYIGAAQMVNIAKTDQYMYRYVLNAARKAGDDKLVSKLMASGEPPYYGEGMLNKYRLFLTSYAGYYRA
ENPFNEKNREWYTLSSMIMLKEYSWLDRIRYFQGLLKTYPLVYSQLQDINFVTQANRLEIPVYYLIGKHDYTAKFIEEYY
QNLQAPSKELIWFEHSAHGEIWTEPDKFHDIMVNKVLPETYFN

Specific function: Probable aminopeptidase [H]

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S33 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR002410 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 41899; Mature: 41899

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSINKRKVVMSMTVIVIALIGLMFIMPAGTEPILDANGEVIPGSIATMEKIELGGVEQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCE
WVVIRGKSVNNPILLLLSGGPGASEMGRFLKYNKDLEDDFIVVNWEQRGCGKSYPAIKDK
EEEEECCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCC
ESMTVEQYVADINELTGYLKKRFNKEKIYLLGHSWGTIIGTMAVQKFPDQFYAYIGAAQM
CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCHHHHHHHHHHHHH
VNIAKTDQYMYRYVLNAARKAGDDKLVSKLMASGEPPYYGEGMLNKYRLFLTSYAGYYRA
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCHHCC
ENPFNEKNREWYTLSSMIMLKEYSWLDRIRYFQGLLKTYPLVYSQLQDINFVTQANRLEI
CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
PVYYLIGKHDYTAKFIEEYYQNLQAPSKELIWFEHSAHGEIWTEPDKFHDIMVNKVLPET
EEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCHH
YFN
CCC
>Mature Secondary Structure
MKKSINKRKVVMSMTVIVIALIGLMFIMPAGTEPILDANGEVIPGSIATMEKIELGGVEQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCE
WVVIRGKSVNNPILLLLSGGPGASEMGRFLKYNKDLEDDFIVVNWEQRGCGKSYPAIKDK
EEEEECCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCC
ESMTVEQYVADINELTGYLKKRFNKEKIYLLGHSWGTIIGTMAVQKFPDQFYAYIGAAQM
CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCHHHHHHHHHHHHH
VNIAKTDQYMYRYVLNAARKAGDDKLVSKLMASGEPPYYGEGMLNKYRLFLTSYAGYYRA
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCHHCC
ENPFNEKNREWYTLSSMIMLKEYSWLDRIRYFQGLLKTYPLVYSQLQDINFVTQANRLEI
CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
PVYYLIGKHDYTAKFIEEYYQNLQAPSKELIWFEHSAHGEIWTEPDKFHDIMVNKVLPET
EEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCHH
YFN
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969501; 9384377 [H]