| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932802
Identifier: 220932802
GI number: 220932802
Start: 2115852
End: 2116664
Strand: Reverse
Name: 220932802
Synonym: Hore_19680
Alternate gene names: NA
Gene position: 2116664-2115852 (Counterclockwise)
Preceding gene: 220932803
Following gene: 220932801
Centisome position: 82.1
GC content: 42.31
Gene sequence:
>813_bases ATGTTAAAGAGATTTAATAGAAGCAACATTAAGAATATTTGGCCATTAAAGTTTATGGCAATGGTTATTATGGTGGGATT AAGTCTGGTGGTAGTTTCTTCTATGGTTCAGGCCGGAGAGGAGTCTCCCCTACAGAAGGGTCAGAAGTTATATGTCAGGG CCCGGGATATTTTTTACAATGGTGAGGGGGGTTATCAGGAAATAAAAAAGATCGTTGATAACTGTGAAGAAATTCTATCT TCATCTGAAGACAACTATAAAAAATATTACTGGCAGGGACAGTTAAAGTTCCTCCAGGGAGAGGTTGCTGAAGCCTTAGG TAAACAAAGGGAGGCGGCTGTATCTTTTGATAAGGCCAGTCAGCTTGCCAGAAAAGCCATTGATAATAAATCTGACTTCA GTGATGCTTACCGGCTTATGGCCGATGCCTATATGAGGCTTATGAATTACAAGGGTTCCCTTTTTGCCGTGACAAAAGGA CCCCAGTCCCTAAAACTGGCCCAGAAAGCGGTGAGCCTTGATAGAACAAATTATAGAGCCCTGAATACCATGGCTATTTA TTACATAAATGCCCCTGAAATCGGTGGTGGTGATGTCAATAAGGGGATTAAAACCCTTCAAAAAGCTCTGGAGAGTAATG ACAGGTTTGATAATTTTATTTCCTATATGTGGCTGGCAACTGCCCATAAAAAGAAGGGGGAGGCTTCTGCGGCCATGAGG TATGTAAAGAAGGCCCTTGAGATATACCCTGGCAGTGGCTGGGCCAGATGGCTTATGGAATCAATTAAAAAACAGGAAGG GGAGGAAAAATGA
Upstream 100 bases:
>100_bases AGGGTCAACGATGTTGGTGGTGACTTTGATATAGAGTCACAACCGGGACAGGGAACCACTGTAAAAGTTTCTATTCATTA AAATAAGGAGGATGAGGAAA
Downstream 100 bases:
>100_bases CCATTCTAAAGGCCCGGGGTATCAAGAAGGTCTATACCACTCAGGCAGAAAAGGTCTATGCCCTCAAAGGGGTAGACCTG GAGATAAATAAAGGTGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MLKRFNRSNIKNIWPLKFMAMVIMVGLSLVVVSSMVQAGEESPLQKGQKLYVRARDIFYNGEGGYQEIKKIVDNCEEILS SSEDNYKKYYWQGQLKFLQGEVAEALGKQREAAVSFDKASQLARKAIDNKSDFSDAYRLMADAYMRLMNYKGSLFAVTKG PQSLKLAQKAVSLDRTNYRALNTMAIYYINAPEIGGGDVNKGIKTLQKALESNDRFDNFISYMWLATAHKKKGEASAAMR YVKKALEIYPGSGWARWLMESIKKQEGEEK
Sequences:
>Translated_270_residues MLKRFNRSNIKNIWPLKFMAMVIMVGLSLVVVSSMVQAGEESPLQKGQKLYVRARDIFYNGEGGYQEIKKIVDNCEEILS SSEDNYKKYYWQGQLKFLQGEVAEALGKQREAAVSFDKASQLARKAIDNKSDFSDAYRLMADAYMRLMNYKGSLFAVTKG PQSLKLAQKAVSLDRTNYRALNTMAIYYINAPEIGGGDVNKGIKTLQKALESNDRFDNFISYMWLATAHKKKGEASAAMR YVKKALEIYPGSGWARWLMESIKKQEGEEK >Mature_270_residues MLKRFNRSNIKNIWPLKFMAMVIMVGLSLVVVSSMVQAGEESPLQKGQKLYVRARDIFYNGEGGYQEIKKIVDNCEEILS SSEDNYKKYYWQGQLKFLQGEVAEALGKQREAAVSFDKASQLARKAIDNKSDFSDAYRLMADAYMRLMNYKGSLFAVTKG PQSLKLAQKAVSLDRTNYRALNTMAIYYINAPEIGGGDVNKGIKTLQKALESNDRFDNFISYMWLATAHKKKGEASAAMR YVKKALEIYPGSGWARWLMESIKKQEGEEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30676; Mature: 30676
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKRFNRSNIKNIWPLKFMAMVIMVGLSLVVVSSMVQAGEESPLQKGQKLYVRARDIFYN CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHEEEEEEHEEEC GEGGYQEIKKIVDNCEEILSSSEDNYKKYYWQGQLKFLQGEVAEALGKQREAAVSFDKAS CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLARKAIDNKSDFSDAYRLMADAYMRLMNYKGSLFAVTKGPQSLKLAQKAVSLDRTNYRA HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCHHE LNTMAIYYINAPEIGGGDVNKGIKTLQKALESNDRFDNFISYMWLATAHKKKGEASAAMR EEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHH YVKKALEIYPGSGWARWLMESIKKQEGEEK HHHHHHHHCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLKRFNRSNIKNIWPLKFMAMVIMVGLSLVVVSSMVQAGEESPLQKGQKLYVRARDIFYN CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHEEEEEEHEEEC GEGGYQEIKKIVDNCEEILSSSEDNYKKYYWQGQLKFLQGEVAEALGKQREAAVSFDKAS CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLARKAIDNKSDFSDAYRLMADAYMRLMNYKGSLFAVTKGPQSLKLAQKAVSLDRTNYRA HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCHHE LNTMAIYYINAPEIGGGDVNKGIKTLQKALESNDRFDNFISYMWLATAHKKKGEASAAMR EEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHH YVKKALEIYPGSGWARWLMESIKKQEGEEK HHHHHHHHCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA