| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932794
Identifier: 220932794
GI number: 220932794
Start: 2106800
End: 2107501
Strand: Reverse
Name: 220932794
Synonym: Hore_19600
Alternate gene names: NA
Gene position: 2107501-2106800 (Counterclockwise)
Preceding gene: 220932795
Following gene: 220932793
Centisome position: 81.74
GC content: 29.91
Gene sequence:
>702_bases ATGATTGAGATAAAAAATAACCTGTTAATTCAGGTAGACAAATTAACCACAAGCTATTTGTTTGTACTGGGAGAACAGCA GGGGAAGTTAGTAAAGAAATGGGAATGTGAATATAAATATGATGAGTATTTATTAAAAAAATTTACGGAGATAGAAAATA AAGGGGTTTATGTAAAAGTTGATAGAACAACATGGAACAAAATAGAAGTAAAAAATAATGAAGTAATACTATCAAAGCCA GAGAAAGAAGTACTACCTATTTTAAATAGTAGTAATGAATATCCTTTTATTGCTTTTAATTTAAACAATGATAAAGAATT AGAGAAGATAAAGAGAATAAAAGATTATCCAAAAAAAACATATAAGATATATAGTCCTGTGTCTAATACAGAAAAATATA GTATTGAGTTTGATTGGCTTTCCAGTCCAAGAATAATCGGGTATATTTTACCCCCTGATGGTAATTACCCCAAATTAATA TTCACCAATGGGTATGCTGTTTACTGGGAGGATGATAAATTTGTTTACAGGCCGTGGATTGAAGAACTGTGTACGGAGAA TGGAGAAAAGGAAATATTTAATCTAATTAATGAAGATATTGACAATGACAATAATTACGAGACTTTAGTTACACAGAAAC TTGACTCAAACTGGGAAGAACCGTACAAAGAAAAGCTCTGGATAATAGATTACGATGAATAG
Upstream 100 bases:
>100_bases AGGTCACAGGGTGCAGAACTTGGAGACATTTTTGTATATAAAAGAAGATAAGGCAAACTTAAATCTTATCTGGGAAGAGG AAACCAGAGATGTAGTTGAT
Downstream 100 bases:
>100_bases GATATTATCCTGGATATATTTTTAAAGGAGGTAGAGAAATAAATACCATAGGATTTTAAAACGGTTATTTTACAAGTGAA CCTTTATATTATGGCAACCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MIEIKNNLLIQVDKLTTSYLFVLGEQQGKLVKKWECEYKYDEYLLKKFTEIENKGVYVKVDRTTWNKIEVKNNEVILSKP EKEVLPILNSSNEYPFIAFNLNNDKELEKIKRIKDYPKKTYKIYSPVSNTEKYSIEFDWLSSPRIIGYILPPDGNYPKLI FTNGYAVYWEDDKFVYRPWIEELCTENGEKEIFNLINEDIDNDNNYETLVTQKLDSNWEEPYKEKLWIIDYDE
Sequences:
>Translated_233_residues MIEIKNNLLIQVDKLTTSYLFVLGEQQGKLVKKWECEYKYDEYLLKKFTEIENKGVYVKVDRTTWNKIEVKNNEVILSKP EKEVLPILNSSNEYPFIAFNLNNDKELEKIKRIKDYPKKTYKIYSPVSNTEKYSIEFDWLSSPRIIGYILPPDGNYPKLI FTNGYAVYWEDDKFVYRPWIEELCTENGEKEIFNLINEDIDNDNNYETLVTQKLDSNWEEPYKEKLWIIDYDE >Mature_233_residues MIEIKNNLLIQVDKLTTSYLFVLGEQQGKLVKKWECEYKYDEYLLKKFTEIENKGVYVKVDRTTWNKIEVKNNEVILSKP EKEVLPILNSSNEYPFIAFNLNNDKELEKIKRIKDYPKKTYKIYSPVSNTEKYSIEFDWLSSPRIIGYILPPDGNYPKLI FTNGYAVYWEDDKFVYRPWIEELCTENGEKEIFNLINEDIDNDNNYETLVTQKLDSNWEEPYKEKLWIIDYDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27985; Mature: 27985
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEIKNNLLIQVDKLTTSYLFVLGEQQGKLVKKWECEYKYDEYLLKKFTEIENKGVYVKV CEEECCCEEEEEECCCEEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEE DRTTWNKIEVKNNEVILSKPEKEVLPILNSSNEYPFIAFNLNNDKELEKIKRIKDYPKKT ECCCCEEEEEECCEEEEECCCHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCE YKIYSPVSNTEKYSIEFDWLSSPRIIGYILPPDGNYPKLIFTNGYAVYWEDDKFVYRPWI EEEECCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCEEEEECCEEEEECCCCEEEHHHH EELCTENGEKEIFNLINEDIDNDNNYETLVTQKLDSNWEEPYKEKLWIIDYDE HHHHHCCCHHHHHHHHHHCCCCCCCEEEEEEEHHCCCCCCCCCCEEEEEEECC >Mature Secondary Structure MIEIKNNLLIQVDKLTTSYLFVLGEQQGKLVKKWECEYKYDEYLLKKFTEIENKGVYVKV CEEECCCEEEEEECCCEEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEE DRTTWNKIEVKNNEVILSKPEKEVLPILNSSNEYPFIAFNLNNDKELEKIKRIKDYPKKT ECCCCEEEEEECCEEEEECCCHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCE YKIYSPVSNTEKYSIEFDWLSSPRIIGYILPPDGNYPKLIFTNGYAVYWEDDKFVYRPWI EEEECCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCEEEEECCEEEEECCCCEEEHHHH EELCTENGEKEIFNLINEDIDNDNNYETLVTQKLDSNWEEPYKEKLWIIDYDE HHHHHCCCHHHHHHHHHHCCCCCCCEEEEEEEHHCCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA