| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932761
Identifier: 220932761
GI number: 220932761
Start: 2061046
End: 2063073
Strand: Reverse
Name: 220932761
Synonym: Hore_19270
Alternate gene names: NA
Gene position: 2063073-2061046 (Counterclockwise)
Preceding gene: 220932762
Following gene: 220932760
Centisome position: 80.02
GC content: 39.0
Gene sequence:
>2028_bases ATGGTTCGCTCTCTTATCAAGCTTATTCTGATCTCTATATTATTTTTTACAGCAGCTGTTTCCGGACAGGCCATTCCCGG ATATAATATGTATTACTCTGGTACCATAAAATATGGTGTTGTTTATGACAAAGGTAGCAGGGATTACCTTCCCGAATACA GGTTATATGTATACGGATGCCCGGTGACAGGTCTATATGTGGCCGGTTATCTTGACAATAATGGAGAGATTATAGACGGG CTATATTCCAGTTACAGTAACGGTAATTTTAAGGGTGAACTGGGAGATATAACACTGGATAAATTTGGAGGCAGTTTTAT TCAGTTTAACCAGCAGCAGCGGGGAGGCTACTTTTCATTTTCTATACCCGGAAGATTTGAAATGGGGGCTGCTGCAGCCA GGATTGAAGGGATAAATGAAGAGGAGACATTAACAGGTAATGGAACTTCAGGCCCCTATTATTTAAGTTATACTCCCGTT ATCCCGGGGAGTGAAAGTGTTGAAAGAGGTGGGGTTATTTTAAAGGAGGATGAATATGAGCTTGATTATCTGACTGGTAG AATAACCTTTAAAGAACCCCTTAAACGGTATGAAGAGGCCAAAGTCAGTTATATGTACCAGCCTACCGGGGGGTATTTTG AGAGATTTTTTAAAGGATTATTGTTATCAGGTACTTATAAGAACTGGGAGACAAAATTAAATGTTTTTCAGTTTGAAGAT CAACCCCTTTCTAACCCGGGTGAAATAAATTTAATTCCAGGAAGCCAGCTGGCCGGGGTATTAAATATTGATTATAAAAA TGATTACCTTGAGTTTATTAATGAAATAGATATGTCAAAGATCAGGGGGCAGAGAGACTCTGAAGATATTGCCTATGAAG GCCGGATAAAAGTAGGGTCACCCCTAAATTACCTCGAGTATGGTCGGATTTACAGGGGGCCTGACTTTATAAACTCCCTT GAAAGTTTTGAAGCAGATCCACTCTCTTTACAATCCCTTGAGGGTCGATGGCAGGTTAATCCCAGGATATATATAACAGG AGAGATTGAATACAGCCACGATAATCCCGGTAATGACCCCGGGAAAATTACCGGTTTTGAAAGTTTAAAAAGTCTTAAAG GATACTGGCAACAGGGTCCTTTTTCTTATGTGATTCTTCATTTCCAGCACAAGGACAGAGGAGATGATTTGGTTTATCTC CCAACCGGTGAGGATATTAAGACCTTTTCTGTTACTTATAGTTATCATAACAATAATTCATGGGTGTTAAGTATTAAAAG GGGGAAACTTTTGAAAAAAAGCCAGTCAGCCCGGTTTTTAAACCATTATTTTAATGAGCTGGAATCTTCTCTCGACTGGA CCCATGACATGGTGGAAACTGGGCTTAATCTCGATTTGAAATATGTTGAACCACTATTGCCTGAAGCCTTTCCAGACAGA CTGGATTATACGATAAAATATGACCTGGCCTACCTTTTTTCCTGCGGCAGGGTGTCAATAGGGGGAATGGAATTATCAGA ACCCGATTATACCCTTCATCTTCAGGAACTATCCCTTAAAAAGTATATTAAAGATGATTGGCTTGTCAGGTTAAAGTGGG AACGGGAAAGGGAGGAATACCCAGGTGGGGATGGTGGGCCTGAAAATAAGGTCAGGGGTATGGCTGTTTATTATGGACCT GTTATGGTAAATACTATGCTGGAATCAGATTTTAACGGAAAAAAGAGGCGGGGCTGGCTTAAATTAACAAAAGGACAGGG GGAACTTACATTTAATTATAATGAAAATAGTGAATTTATTGAAAAAAATATAACAGGTAAAATAGATATTACTTCTAAAA TTAAATACCAGCAGGGGCTGACCAGAAAGGTTTTTAAGGAGAATGGTCCAAATAATAATAGTACTTCTCTTAAAACAGTT ATCAGGTTTAATGATACGATAAAGCTTAACTTTTCACTGGAATCCCCCCTGCCGGTTAACGACTTTAAAGATAGTGTCAT CAGACTTGAATTAATTCTAGATATTTAG
Upstream 100 bases:
>100_bases ATTATCAGTATAAAAAGGGGGTGCCTTGCATTATATATATTATAAAGGGTTGGCCTGGGAAAATATCTTATTATGAAACA GGGGGAGGATATCGGCAACT
Downstream 100 bases:
>100_bases TGGTTATAACCTGGTTCTGTCAGGCATAACTATTTTAATGGAATAACAACTTCATCAAAAAAAGAAAGGAGTAGTGAGCA TGAAAAAATTTCTAACTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 675; Mature: 675
Protein sequence:
>675_residues MVRSLIKLILISILFFTAAVSGQAIPGYNMYYSGTIKYGVVYDKGSRDYLPEYRLYVYGCPVTGLYVAGYLDNNGEIIDG LYSSYSNGNFKGELGDITLDKFGGSFIQFNQQQRGGYFSFSIPGRFEMGAAAARIEGINEEETLTGNGTSGPYYLSYTPV IPGSESVERGGVILKEDEYELDYLTGRITFKEPLKRYEEAKVSYMYQPTGGYFERFFKGLLLSGTYKNWETKLNVFQFED QPLSNPGEINLIPGSQLAGVLNIDYKNDYLEFINEIDMSKIRGQRDSEDIAYEGRIKVGSPLNYLEYGRIYRGPDFINSL ESFEADPLSLQSLEGRWQVNPRIYITGEIEYSHDNPGNDPGKITGFESLKSLKGYWQQGPFSYVILHFQHKDRGDDLVYL PTGEDIKTFSVTYSYHNNNSWVLSIKRGKLLKKSQSARFLNHYFNELESSLDWTHDMVETGLNLDLKYVEPLLPEAFPDR LDYTIKYDLAYLFSCGRVSIGGMELSEPDYTLHLQELSLKKYIKDDWLVRLKWEREREEYPGGDGGPENKVRGMAVYYGP VMVNTMLESDFNGKKRRGWLKLTKGQGELTFNYNENSEFIEKNITGKIDITSKIKYQQGLTRKVFKENGPNNNSTSLKTV IRFNDTIKLNFSLESPLPVNDFKDSVIRLELILDI
Sequences:
>Translated_675_residues MVRSLIKLILISILFFTAAVSGQAIPGYNMYYSGTIKYGVVYDKGSRDYLPEYRLYVYGCPVTGLYVAGYLDNNGEIIDG LYSSYSNGNFKGELGDITLDKFGGSFIQFNQQQRGGYFSFSIPGRFEMGAAAARIEGINEEETLTGNGTSGPYYLSYTPV IPGSESVERGGVILKEDEYELDYLTGRITFKEPLKRYEEAKVSYMYQPTGGYFERFFKGLLLSGTYKNWETKLNVFQFED QPLSNPGEINLIPGSQLAGVLNIDYKNDYLEFINEIDMSKIRGQRDSEDIAYEGRIKVGSPLNYLEYGRIYRGPDFINSL ESFEADPLSLQSLEGRWQVNPRIYITGEIEYSHDNPGNDPGKITGFESLKSLKGYWQQGPFSYVILHFQHKDRGDDLVYL PTGEDIKTFSVTYSYHNNNSWVLSIKRGKLLKKSQSARFLNHYFNELESSLDWTHDMVETGLNLDLKYVEPLLPEAFPDR LDYTIKYDLAYLFSCGRVSIGGMELSEPDYTLHLQELSLKKYIKDDWLVRLKWEREREEYPGGDGGPENKVRGMAVYYGP VMVNTMLESDFNGKKRRGWLKLTKGQGELTFNYNENSEFIEKNITGKIDITSKIKYQQGLTRKVFKENGPNNNSTSLKTV IRFNDTIKLNFSLESPLPVNDFKDSVIRLELILDI >Mature_675_residues MVRSLIKLILISILFFTAAVSGQAIPGYNMYYSGTIKYGVVYDKGSRDYLPEYRLYVYGCPVTGLYVAGYLDNNGEIIDG LYSSYSNGNFKGELGDITLDKFGGSFIQFNQQQRGGYFSFSIPGRFEMGAAAARIEGINEEETLTGNGTSGPYYLSYTPV IPGSESVERGGVILKEDEYELDYLTGRITFKEPLKRYEEAKVSYMYQPTGGYFERFFKGLLLSGTYKNWETKLNVFQFED QPLSNPGEINLIPGSQLAGVLNIDYKNDYLEFINEIDMSKIRGQRDSEDIAYEGRIKVGSPLNYLEYGRIYRGPDFINSL ESFEADPLSLQSLEGRWQVNPRIYITGEIEYSHDNPGNDPGKITGFESLKSLKGYWQQGPFSYVILHFQHKDRGDDLVYL PTGEDIKTFSVTYSYHNNNSWVLSIKRGKLLKKSQSARFLNHYFNELESSLDWTHDMVETGLNLDLKYVEPLLPEAFPDR LDYTIKYDLAYLFSCGRVSIGGMELSEPDYTLHLQELSLKKYIKDDWLVRLKWEREREEYPGGDGGPENKVRGMAVYYGP VMVNTMLESDFNGKKRRGWLKLTKGQGELTFNYNENSEFIEKNITGKIDITSKIKYQQGLTRKVFKENGPNNNSTSLKTV IRFNDTIKLNFSLESPLPVNDFKDSVIRLELILDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77168; Mature: 77168
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRSLIKLILISILFFTAAVSGQAIPGYNMYYSGTIKYGVVYDKGSRDYLPEYRLYVYGC CHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECEEEEEEEEECCCCCCCCCEEEEEEEC PVTGLYVAGYLDNNGEIIDGLYSSYSNGNFKGELGDITLDKFGGSFIQFNQQQRGGYFSF CCCEEEEEEEECCCCCEEHHHHHCCCCCCEEEEECCEEHHHCCCCEEEECHHHCCCEEEE SIPGRFEMGAAAARIEGINEEETLTGNGTSGPYYLSYTPVIPGSESVERGGVILKEDEYE ECCCCCCCCCHHHHHCCCCCCCEEECCCCCCCEEEEEECCCCCCCCHHHCCEEEECCCCE LDYLTGRITFKEPLKRYEEAKVSYMYQPTGGYFERFFKGLLLSGTYKNWETKLNVFQFED EEEEEEEEEHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHEECCCCCCCCEEEEEEEECC QPLSNPGEINLIPGSQLAGVLNIDYKNDYLEFINEIDMSKIRGQRDSEDIAYEGRIKVGS CCCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHCHHHHCCCCCCCCCEEECEEEECC PLNYLEYGRIYRGPDFINSLESFEADPLSLQSLEGRWQVNPRIYITGEIEYSHDNPGNDP CCCHHHHCCEECCHHHHHHHHHCCCCCCCCCCCCCEEEECCEEEEEEEEEECCCCCCCCC GKITGFESLKSLKGYWQQGPFSYVILHFQHKDRGDDLVYLPTGEDIKTFSVTYSYHNNNS CCEECHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCEEEEECCCCEEEEEEEEEEECCCE WVLSIKRGKLLKKSQSARFLNHYFNELESSLDWTHDMVETGLNLDLKYVEPLLPEAFPDR EEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEHHHHHHCCCCCCCC LDYTIKYDLAYLFSCGRVSIGGMELSEPDYTLHLQELSLKKYIKDDWLVRLKWEREREEY CCEEEEEEEEEEEECCCEEECCEEECCCCEEEEEHHHHHHHHCCCCEEEEEEEECCHHCC PGGDGGPENKVRGMAVYYGPVMVNTMLESDFNGKKRRGWLKLTKGQGELTFNYNENSEFI CCCCCCCCCCCEEEEEEECCEEEEHHHHCCCCCCCCCCEEEEECCCCEEEEEECCCCHHH EKNITGKIDITSKIKYQQGLTRKVFKENGPNNNSTSLKTVIRFNDTIKLNFSLESPLPVN HHCCCEEEEEEEEEHHHHCCHHHHHHCCCCCCCCCEEEEEEEECCEEEEEEEECCCCCCC DFKDSVIRLELILDI CCCCCEEEEEEEEEC >Mature Secondary Structure MVRSLIKLILISILFFTAAVSGQAIPGYNMYYSGTIKYGVVYDKGSRDYLPEYRLYVYGC CHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECEEEEEEEEECCCCCCCCCEEEEEEEC PVTGLYVAGYLDNNGEIIDGLYSSYSNGNFKGELGDITLDKFGGSFIQFNQQQRGGYFSF CCCEEEEEEEECCCCCEEHHHHHCCCCCCEEEEECCEEHHHCCCCEEEECHHHCCCEEEE SIPGRFEMGAAAARIEGINEEETLTGNGTSGPYYLSYTPVIPGSESVERGGVILKEDEYE ECCCCCCCCCHHHHHCCCCCCCEEECCCCCCCEEEEEECCCCCCCCHHHCCEEEECCCCE LDYLTGRITFKEPLKRYEEAKVSYMYQPTGGYFERFFKGLLLSGTYKNWETKLNVFQFED EEEEEEEEEHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHEECCCCCCCCEEEEEEEECC QPLSNPGEINLIPGSQLAGVLNIDYKNDYLEFINEIDMSKIRGQRDSEDIAYEGRIKVGS CCCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHCHHHHCCCCCCCCCEEECEEEECC PLNYLEYGRIYRGPDFINSLESFEADPLSLQSLEGRWQVNPRIYITGEIEYSHDNPGNDP CCCHHHHCCEECCHHHHHHHHHCCCCCCCCCCCCCEEEECCEEEEEEEEEECCCCCCCCC GKITGFESLKSLKGYWQQGPFSYVILHFQHKDRGDDLVYLPTGEDIKTFSVTYSYHNNNS CCEECHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCEEEEECCCCEEEEEEEEEEECCCE WVLSIKRGKLLKKSQSARFLNHYFNELESSLDWTHDMVETGLNLDLKYVEPLLPEAFPDR EEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEHHHHHHCCCCCCCC LDYTIKYDLAYLFSCGRVSIGGMELSEPDYTLHLQELSLKKYIKDDWLVRLKWEREREEY CCEEEEEEEEEEEECCCEEECCEEECCCCEEEEEHHHHHHHHCCCCEEEEEEEECCHHCC PGGDGGPENKVRGMAVYYGPVMVNTMLESDFNGKKRRGWLKLTKGQGELTFNYNENSEFI CCCCCCCCCCCEEEEEEECCEEEEHHHHCCCCCCCCCCEEEEECCCCEEEEEECCCCHHH EKNITGKIDITSKIKYQQGLTRKVFKENGPNNNSTSLKTVIRFNDTIKLNFSLESPLPVN HHCCCEEEEEEEEEHHHHCCHHHHHHCCCCCCCCCEEEEEEEECCEEEEEEEECCCCCCC DFKDSVIRLELILDI CCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA