| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932735
Identifier: 220932735
GI number: 220932735
Start: 2030123
End: 2031595
Strand: Reverse
Name: 220932735
Synonym: Hore_19000
Alternate gene names: NA
Gene position: 2031595-2030123 (Counterclockwise)
Preceding gene: 220932736
Following gene: 220932734
Centisome position: 78.8
GC content: 36.66
Gene sequence:
>1473_bases ATGATCTCCATGGATTATAGTTACAAACCAGGTGAATTTGATATTAAGTTTAACATATTTTACCCGCTACTTGGGGGGGT ATTACATTATATCCTGTTTGTTTTTTTATTAGAAGTTATCAGGGCTTATAATTCAGAAGTCGGGGTAGGTATACTAATTT ATTTAATAGGTTTAATCTACATAATAGAAGGGGTATTCAGTGGTTTTATCCATTTTAAAATCAACCTGCCCAGATTTTTT ATTTTACTGGAACTGGCGGTGCCCTGGGTTTTATACTACTTAACTACAGGGGTAGAGGATATTCTTTTATATATATTAAT AAGTGGTGGTCTTCTCGTTTTATGGGCCAGTACCCGGGGTACTGCGGCCCTTTTTTTCGGGTTTAACTTTGATTACAGGG CAATAAAATCGTATGATAACTGGGAATCAGACTGGCGGGTTGAGGATCATATGGTAGTCGATTATCCTGTATACTGGAAG AATATCTTTAAACGTATCCTTTACCTCAATTTTGCCCTGGGGGGTATATGGCTTTTTGTTCGTCAGGTTCGTTTAAGCTC AGTAATTTTAACCTCCCTCTTTACTATCGGGGAATTATTACTGTTAACCATGGTCTATTTTGAAAAAGCAAGGTTTGACT GGCTTTTAGAGGAATTTAAATTTGACAAAAACCTTAATAGTGGCTGGCAGAGAGCAATTATTATAACTGTGGTCTGTTTG CTGGCGGTAAGCTTTTTATTACCGGTTGATTATTCTCCTTTAACCATTTCCCGGATAAGTGACTGGGTATTGACAAATAG TAATAATCCTGACCTGGATATTGAATTTTTTCAGCAGGAGAAGCAACAGCAAACAGATAATAATATCCTGAATGATATCG AGCCTGGTGAAGAAGAGCCCTCGGTTTTGTATTTAATAATCACCTTTATTCATTTTATACCTGTTATCTTCTTTATAATT GTTTTGATAGGGTTTATTTTATCTCTGGTTGTAAGTGAAATAGAGAGGGCCGGAATGATTCCAACTTTTTTCCTTAATTT TTATCTCTTTATCAAACATTTTGTTGGAAATCTGGTTGAGAGGCTATTTAAATTTGCCAGGGGACGCCTGACACGGAGCC GTTTTCCAGGACACAGATTAGAGGGTCATAGGTCACGGAAAACTGAACTGGAACAGATGAATGAACTCATCTCAATTGAG GATTTTTCATTCTCGGGCCGGGTTAAAGATAATATAATTAAAATATTTACATTAATACAGGGTTATTTTTCAAAACTGGG GCTGGGACGTGAGCCCGCGGAGACCCCCTTTGAATACAGTGATAAAATTATTGAAGAAAAACCGGGTTTTGGTGGAGTAG TTGATAAGATAACCCGGTTATATGTAGAAGCTGTCTACAGTAACCATTCCTTGCCGAAAACACTTTTAAATACAGTTAAA AATCTCTGGAAGGAATTTAAAAAAATGATCTGA
Upstream 100 bases:
>100_bases AGTGTCAGGATAATTGTGGTCGGTGACTATGTCATCCACCGGCAATTTCTGAACCGCCCCTTTACCTCTCCATTGACCAT TTACAGGGTCGGGAAGGAGA
Downstream 100 bases:
>100_bases AATTTAATAGAGGAATAGAACCCTGTCTGTCGAATTAATATATAAGAATAGTTAAGTGCAGGTGCAGGCAAGTAGACATA CAACAGAATACGGTAAATAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 490; Mature: 490
Protein sequence:
>490_residues MISMDYSYKPGEFDIKFNIFYPLLGGVLHYILFVFLLEVIRAYNSEVGVGILIYLIGLIYIIEGVFSGFIHFKINLPRFF ILLELAVPWVLYYLTTGVEDILLYILISGGLLVLWASTRGTAALFFGFNFDYRAIKSYDNWESDWRVEDHMVVDYPVYWK NIFKRILYLNFALGGIWLFVRQVRLSSVILTSLFTIGELLLLTMVYFEKARFDWLLEEFKFDKNLNSGWQRAIIITVVCL LAVSFLLPVDYSPLTISRISDWVLTNSNNPDLDIEFFQQEKQQQTDNNILNDIEPGEEEPSVLYLIITFIHFIPVIFFII VLIGFILSLVVSEIERAGMIPTFFLNFYLFIKHFVGNLVERLFKFARGRLTRSRFPGHRLEGHRSRKTELEQMNELISIE DFSFSGRVKDNIIKIFTLIQGYFSKLGLGREPAETPFEYSDKIIEEKPGFGGVVDKITRLYVEAVYSNHSLPKTLLNTVK NLWKEFKKMI
Sequences:
>Translated_490_residues MISMDYSYKPGEFDIKFNIFYPLLGGVLHYILFVFLLEVIRAYNSEVGVGILIYLIGLIYIIEGVFSGFIHFKINLPRFF ILLELAVPWVLYYLTTGVEDILLYILISGGLLVLWASTRGTAALFFGFNFDYRAIKSYDNWESDWRVEDHMVVDYPVYWK NIFKRILYLNFALGGIWLFVRQVRLSSVILTSLFTIGELLLLTMVYFEKARFDWLLEEFKFDKNLNSGWQRAIIITVVCL LAVSFLLPVDYSPLTISRISDWVLTNSNNPDLDIEFFQQEKQQQTDNNILNDIEPGEEEPSVLYLIITFIHFIPVIFFII VLIGFILSLVVSEIERAGMIPTFFLNFYLFIKHFVGNLVERLFKFARGRLTRSRFPGHRLEGHRSRKTELEQMNELISIE DFSFSGRVKDNIIKIFTLIQGYFSKLGLGREPAETPFEYSDKIIEEKPGFGGVVDKITRLYVEAVYSNHSLPKTLLNTVK NLWKEFKKMI >Mature_490_residues MISMDYSYKPGEFDIKFNIFYPLLGGVLHYILFVFLLEVIRAYNSEVGVGILIYLIGLIYIIEGVFSGFIHFKINLPRFF ILLELAVPWVLYYLTTGVEDILLYILISGGLLVLWASTRGTAALFFGFNFDYRAIKSYDNWESDWRVEDHMVVDYPVYWK NIFKRILYLNFALGGIWLFVRQVRLSSVILTSLFTIGELLLLTMVYFEKARFDWLLEEFKFDKNLNSGWQRAIIITVVCL LAVSFLLPVDYSPLTISRISDWVLTNSNNPDLDIEFFQQEKQQQTDNNILNDIEPGEEEPSVLYLIITFIHFIPVIFFII VLIGFILSLVVSEIERAGMIPTFFLNFYLFIKHFVGNLVERLFKFARGRLTRSRFPGHRLEGHRSRKTELEQMNELISIE DFSFSGRVKDNIIKIFTLIQGYFSKLGLGREPAETPFEYSDKIIEEKPGFGGVVDKITRLYVEAVYSNHSLPKTLLNTVK NLWKEFKKMI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57154; Mature: 57154
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISMDYSYKPGEFDIKFNIFYPLLGGVLHYILFVFLLEVIRAYNSEVGVGILIYLIGLIY CCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH IIEGVFSGFIHFKINLPRFFILLELAVPWVLYYLTTGVEDILLYILISGGLLVLWASTRG HHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCEEEEEECCCC TAALFFGFNFDYRAIKSYDNWESDWRVEDHMVVDYPVYWKNIFKRILYLNFALGGIWLFV CEEEEEECCCCHHHHCCCCCCCCCCEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH RQVRLSSVILTSLFTIGELLLLTMVYFEKARFDWLLEEFKFDKNLNSGWQRAIIITVVCL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LAVSFLLPVDYSPLTISRISDWVLTNSNNPDLDIEFFQQEKQQQTDNNILNDIEPGEEEP HHHHHHHCCCCCCCCHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC SVLYLIITFIHFIPVIFFIIVLIGFILSLVVSEIERAGMIPTFFLNFYLFIKHFVGNLVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH RLFKFARGRLTRSRFPGHRLEGHRSRKTELEQMNELISIEDFSFSGRVKDNIIKIFTLIQ HHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH GYFSKLGLGREPAETPFEYSDKIIEEKPGFGGVVDKITRLYVEAVYSNHSLPKTLLNTVK HHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH NLWKEFKKMI HHHHHHHHCC >Mature Secondary Structure MISMDYSYKPGEFDIKFNIFYPLLGGVLHYILFVFLLEVIRAYNSEVGVGILIYLIGLIY CCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH IIEGVFSGFIHFKINLPRFFILLELAVPWVLYYLTTGVEDILLYILISGGLLVLWASTRG HHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCEEEEEECCCC TAALFFGFNFDYRAIKSYDNWESDWRVEDHMVVDYPVYWKNIFKRILYLNFALGGIWLFV CEEEEEECCCCHHHHCCCCCCCCCCEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH RQVRLSSVILTSLFTIGELLLLTMVYFEKARFDWLLEEFKFDKNLNSGWQRAIIITVVCL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LAVSFLLPVDYSPLTISRISDWVLTNSNNPDLDIEFFQQEKQQQTDNNILNDIEPGEEEP HHHHHHHCCCCCCCCHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC SVLYLIITFIHFIPVIFFIIVLIGFILSLVVSEIERAGMIPTFFLNFYLFIKHFVGNLVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH RLFKFARGRLTRSRFPGHRLEGHRSRKTELEQMNELISIEDFSFSGRVKDNIIKIFTLIQ HHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH GYFSKLGLGREPAETPFEYSDKIIEEKPGFGGVVDKITRLYVEAVYSNHSLPKTLLNTVK HHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH NLWKEFKKMI HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA