Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

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The map label for this gene is 220932735

Identifier: 220932735

GI number: 220932735

Start: 2030123

End: 2031595

Strand: Reverse

Name: 220932735

Synonym: Hore_19000

Alternate gene names: NA

Gene position: 2031595-2030123 (Counterclockwise)

Preceding gene: 220932736

Following gene: 220932734

Centisome position: 78.8

GC content: 36.66

Gene sequence:

>1473_bases
ATGATCTCCATGGATTATAGTTACAAACCAGGTGAATTTGATATTAAGTTTAACATATTTTACCCGCTACTTGGGGGGGT
ATTACATTATATCCTGTTTGTTTTTTTATTAGAAGTTATCAGGGCTTATAATTCAGAAGTCGGGGTAGGTATACTAATTT
ATTTAATAGGTTTAATCTACATAATAGAAGGGGTATTCAGTGGTTTTATCCATTTTAAAATCAACCTGCCCAGATTTTTT
ATTTTACTGGAACTGGCGGTGCCCTGGGTTTTATACTACTTAACTACAGGGGTAGAGGATATTCTTTTATATATATTAAT
AAGTGGTGGTCTTCTCGTTTTATGGGCCAGTACCCGGGGTACTGCGGCCCTTTTTTTCGGGTTTAACTTTGATTACAGGG
CAATAAAATCGTATGATAACTGGGAATCAGACTGGCGGGTTGAGGATCATATGGTAGTCGATTATCCTGTATACTGGAAG
AATATCTTTAAACGTATCCTTTACCTCAATTTTGCCCTGGGGGGTATATGGCTTTTTGTTCGTCAGGTTCGTTTAAGCTC
AGTAATTTTAACCTCCCTCTTTACTATCGGGGAATTATTACTGTTAACCATGGTCTATTTTGAAAAAGCAAGGTTTGACT
GGCTTTTAGAGGAATTTAAATTTGACAAAAACCTTAATAGTGGCTGGCAGAGAGCAATTATTATAACTGTGGTCTGTTTG
CTGGCGGTAAGCTTTTTATTACCGGTTGATTATTCTCCTTTAACCATTTCCCGGATAAGTGACTGGGTATTGACAAATAG
TAATAATCCTGACCTGGATATTGAATTTTTTCAGCAGGAGAAGCAACAGCAAACAGATAATAATATCCTGAATGATATCG
AGCCTGGTGAAGAAGAGCCCTCGGTTTTGTATTTAATAATCACCTTTATTCATTTTATACCTGTTATCTTCTTTATAATT
GTTTTGATAGGGTTTATTTTATCTCTGGTTGTAAGTGAAATAGAGAGGGCCGGAATGATTCCAACTTTTTTCCTTAATTT
TTATCTCTTTATCAAACATTTTGTTGGAAATCTGGTTGAGAGGCTATTTAAATTTGCCAGGGGACGCCTGACACGGAGCC
GTTTTCCAGGACACAGATTAGAGGGTCATAGGTCACGGAAAACTGAACTGGAACAGATGAATGAACTCATCTCAATTGAG
GATTTTTCATTCTCGGGCCGGGTTAAAGATAATATAATTAAAATATTTACATTAATACAGGGTTATTTTTCAAAACTGGG
GCTGGGACGTGAGCCCGCGGAGACCCCCTTTGAATACAGTGATAAAATTATTGAAGAAAAACCGGGTTTTGGTGGAGTAG
TTGATAAGATAACCCGGTTATATGTAGAAGCTGTCTACAGTAACCATTCCTTGCCGAAAACACTTTTAAATACAGTTAAA
AATCTCTGGAAGGAATTTAAAAAAATGATCTGA

Upstream 100 bases:

>100_bases
AGTGTCAGGATAATTGTGGTCGGTGACTATGTCATCCACCGGCAATTTCTGAACCGCCCCTTTACCTCTCCATTGACCAT
TTACAGGGTCGGGAAGGAGA

Downstream 100 bases:

>100_bases
AATTTAATAGAGGAATAGAACCCTGTCTGTCGAATTAATATATAAGAATAGTTAAGTGCAGGTGCAGGCAAGTAGACATA
CAACAGAATACGGTAAATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 490; Mature: 490

Protein sequence:

>490_residues
MISMDYSYKPGEFDIKFNIFYPLLGGVLHYILFVFLLEVIRAYNSEVGVGILIYLIGLIYIIEGVFSGFIHFKINLPRFF
ILLELAVPWVLYYLTTGVEDILLYILISGGLLVLWASTRGTAALFFGFNFDYRAIKSYDNWESDWRVEDHMVVDYPVYWK
NIFKRILYLNFALGGIWLFVRQVRLSSVILTSLFTIGELLLLTMVYFEKARFDWLLEEFKFDKNLNSGWQRAIIITVVCL
LAVSFLLPVDYSPLTISRISDWVLTNSNNPDLDIEFFQQEKQQQTDNNILNDIEPGEEEPSVLYLIITFIHFIPVIFFII
VLIGFILSLVVSEIERAGMIPTFFLNFYLFIKHFVGNLVERLFKFARGRLTRSRFPGHRLEGHRSRKTELEQMNELISIE
DFSFSGRVKDNIIKIFTLIQGYFSKLGLGREPAETPFEYSDKIIEEKPGFGGVVDKITRLYVEAVYSNHSLPKTLLNTVK
NLWKEFKKMI

Sequences:

>Translated_490_residues
MISMDYSYKPGEFDIKFNIFYPLLGGVLHYILFVFLLEVIRAYNSEVGVGILIYLIGLIYIIEGVFSGFIHFKINLPRFF
ILLELAVPWVLYYLTTGVEDILLYILISGGLLVLWASTRGTAALFFGFNFDYRAIKSYDNWESDWRVEDHMVVDYPVYWK
NIFKRILYLNFALGGIWLFVRQVRLSSVILTSLFTIGELLLLTMVYFEKARFDWLLEEFKFDKNLNSGWQRAIIITVVCL
LAVSFLLPVDYSPLTISRISDWVLTNSNNPDLDIEFFQQEKQQQTDNNILNDIEPGEEEPSVLYLIITFIHFIPVIFFII
VLIGFILSLVVSEIERAGMIPTFFLNFYLFIKHFVGNLVERLFKFARGRLTRSRFPGHRLEGHRSRKTELEQMNELISIE
DFSFSGRVKDNIIKIFTLIQGYFSKLGLGREPAETPFEYSDKIIEEKPGFGGVVDKITRLYVEAVYSNHSLPKTLLNTVK
NLWKEFKKMI
>Mature_490_residues
MISMDYSYKPGEFDIKFNIFYPLLGGVLHYILFVFLLEVIRAYNSEVGVGILIYLIGLIYIIEGVFSGFIHFKINLPRFF
ILLELAVPWVLYYLTTGVEDILLYILISGGLLVLWASTRGTAALFFGFNFDYRAIKSYDNWESDWRVEDHMVVDYPVYWK
NIFKRILYLNFALGGIWLFVRQVRLSSVILTSLFTIGELLLLTMVYFEKARFDWLLEEFKFDKNLNSGWQRAIIITVVCL
LAVSFLLPVDYSPLTISRISDWVLTNSNNPDLDIEFFQQEKQQQTDNNILNDIEPGEEEPSVLYLIITFIHFIPVIFFII
VLIGFILSLVVSEIERAGMIPTFFLNFYLFIKHFVGNLVERLFKFARGRLTRSRFPGHRLEGHRSRKTELEQMNELISIE
DFSFSGRVKDNIIKIFTLIQGYFSKLGLGREPAETPFEYSDKIIEEKPGFGGVVDKITRLYVEAVYSNHSLPKTLLNTVK
NLWKEFKKMI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57154; Mature: 57154

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISMDYSYKPGEFDIKFNIFYPLLGGVLHYILFVFLLEVIRAYNSEVGVGILIYLIGLIY
CCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
IIEGVFSGFIHFKINLPRFFILLELAVPWVLYYLTTGVEDILLYILISGGLLVLWASTRG
HHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCEEEEEECCCC
TAALFFGFNFDYRAIKSYDNWESDWRVEDHMVVDYPVYWKNIFKRILYLNFALGGIWLFV
CEEEEEECCCCHHHHCCCCCCCCCCEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
RQVRLSSVILTSLFTIGELLLLTMVYFEKARFDWLLEEFKFDKNLNSGWQRAIIITVVCL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
LAVSFLLPVDYSPLTISRISDWVLTNSNNPDLDIEFFQQEKQQQTDNNILNDIEPGEEEP
HHHHHHHCCCCCCCCHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
SVLYLIITFIHFIPVIFFIIVLIGFILSLVVSEIERAGMIPTFFLNFYLFIKHFVGNLVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
RLFKFARGRLTRSRFPGHRLEGHRSRKTELEQMNELISIEDFSFSGRVKDNIIKIFTLIQ
HHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
GYFSKLGLGREPAETPFEYSDKIIEEKPGFGGVVDKITRLYVEAVYSNHSLPKTLLNTVK
HHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
NLWKEFKKMI
HHHHHHHHCC
>Mature Secondary Structure
MISMDYSYKPGEFDIKFNIFYPLLGGVLHYILFVFLLEVIRAYNSEVGVGILIYLIGLIY
CCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
IIEGVFSGFIHFKINLPRFFILLELAVPWVLYYLTTGVEDILLYILISGGLLVLWASTRG
HHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCEEEEEECCCC
TAALFFGFNFDYRAIKSYDNWESDWRVEDHMVVDYPVYWKNIFKRILYLNFALGGIWLFV
CEEEEEECCCCHHHHCCCCCCCCCCEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
RQVRLSSVILTSLFTIGELLLLTMVYFEKARFDWLLEEFKFDKNLNSGWQRAIIITVVCL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
LAVSFLLPVDYSPLTISRISDWVLTNSNNPDLDIEFFQQEKQQQTDNNILNDIEPGEEEP
HHHHHHHCCCCCCCCHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
SVLYLIITFIHFIPVIFFIIVLIGFILSLVVSEIERAGMIPTFFLNFYLFIKHFVGNLVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
RLFKFARGRLTRSRFPGHRLEGHRSRKTELEQMNELISIEDFSFSGRVKDNIIKIFTLIQ
HHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
GYFSKLGLGREPAETPFEYSDKIIEEKPGFGGVVDKITRLYVEAVYSNHSLPKTLLNTVK
HHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
NLWKEFKKMI
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA