Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

Click here to switch to the map view.

The map label for this gene is 220932681

Identifier: 220932681

GI number: 220932681

Start: 1970550

End: 1971035

Strand: Reverse

Name: 220932681

Synonym: Hore_18450

Alternate gene names: NA

Gene position: 1971035-1970550 (Counterclockwise)

Preceding gene: 220932682

Following gene: 220932680

Centisome position: 76.45

GC content: 34.98

Gene sequence:

>486_bases
ATGCTTTTCTATATTTTCCTGGGGATATTATTAGGCCAGATGATGGGGAGTAAAGGAACTTACAACAGAAGTTCACAGAA
CCGAAAAGGTAGTTCAAAAAGGGTTACCAAAACCTTTACCAAAAAATTTATACTCTCCAAAGATTCCCCTGAAGCAATAA
CCCCTGATAATATTTCAATAAATGTTAAACCCACCGGACAAAAAGAAGGGGCCCGTGAACCCAATAAATTAATACTATCT
ATCCTGTGGGCTCATTTCAAGGCCTATAAAGAAGGTTTATTAAGATATAAAAGGCGTTCTCCATGGGAAATAATAGAGGA
TTCAAGACTTGATAAGAGCACAATAAATAACAATCTACATAAAGAATGGGTTAGCTTTTTAAATGAAGTTATTGATAGAG
ATCTGGTAAAATGGATCAATAACCCGGATGAAGTTAAAACGAGAACAATGGAAGCAATGAAAAAAATAAACACAAAATCG
GCCTGA

Upstream 100 bases:

>100_bases
TTCAGTGCCCTGGAAGATAGAAATAACTAGAAGGGGTGTGCTTTTTCACACCCTTTCTATATATTTTTTTAAAATATGAT
TAATAAAAGGAGGTTGCATA

Downstream 100 bases:

>100_bases
TTAAAAAATTTGACTTTAACTGACTATTTTGTTATACTATAATAGGAGAATTTTTTGCTTTCTATAATTTCTCATTTTGC
TTTCTTATAATGCCATATAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MLFYIFLGILLGQMMGSKGTYNRSSQNRKGSSKRVTKTFTKKFILSKDSPEAITPDNISINVKPTGQKEGAREPNKLILS
ILWAHFKAYKEGLLRYKRRSPWEIIEDSRLDKSTINNNLHKEWVSFLNEVIDRDLVKWINNPDEVKTRTMEAMKKINTKS
A

Sequences:

>Translated_161_residues
MLFYIFLGILLGQMMGSKGTYNRSSQNRKGSSKRVTKTFTKKFILSKDSPEAITPDNISINVKPTGQKEGAREPNKLILS
ILWAHFKAYKEGLLRYKRRSPWEIIEDSRLDKSTINNNLHKEWVSFLNEVIDRDLVKWINNPDEVKTRTMEAMKKINTKS
A
>Mature_161_residues
MLFYIFLGILLGQMMGSKGTYNRSSQNRKGSSKRVTKTFTKKFILSKDSPEAITPDNISINVKPTGQKEGAREPNKLILS
ILWAHFKAYKEGLLRYKRRSPWEIIEDSRLDKSTINNNLHKEWVSFLNEVIDRDLVKWINNPDEVKTRTMEAMKKINTKS
A

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18664; Mature: 18664

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFYIFLGILLGQMMGSKGTYNRSSQNRKGSSKRVTKTFTKKFILSKDSPEAITPDNISI
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEE
NVKPTGQKEGAREPNKLILSILWAHFKAYKEGLLRYKRRSPWEIIEDSRLDKSTINNNLH
EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHCHHH
KEWVSFLNEVIDRDLVKWINNPDEVKTRTMEAMKKINTKSA
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLFYIFLGILLGQMMGSKGTYNRSSQNRKGSSKRVTKTFTKKFILSKDSPEAITPDNISI
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEE
NVKPTGQKEGAREPNKLILSILWAHFKAYKEGLLRYKRRSPWEIIEDSRLDKSTINNNLH
EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHCHHH
KEWVSFLNEVIDRDLVKWINNPDEVKTRTMEAMKKINTKSA
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA