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The map label for this gene is opuCC [H]

Identifier: 220932678

GI number: 220932678

Start: 1967509

End: 1968459

Strand: Reverse

Name: opuCC [H]

Synonym: Hore_18420

Alternate gene names: 220932678

Gene position: 1968459-1967509 (Counterclockwise)

Preceding gene: 220932679

Following gene: 220932676

Centisome position: 76.35

GC content: 41.22

Gene sequence:

>951_bases
ATGGTAAAAAGAAGGTTTATTTTAGTTTTAGCTGTGTTGTTACTGGGAATAGTTCTTCTGGCTGGATGTGGTGATAAGCA
GGAAGAAGGACAGGCTGTTATTAAAATGGGGACCAATGTTGAATTTTTAAATAGAGATGATGGTATTCCTGGACTGGAAA
AAGCCTATGGATTTAAATTTGACCGGGATGCCTTAACAACCATGAAAACAGGGTTAACATATGATGCTTTAAGGAATAAC
AAACTAGATGTAGCCATGGGTTTTGCCACAGATGGGCGGATTGCTGCTTTTGACCTTGTCTCACTGGAAGATGATAAAAA
CTATTTTCCGGTCTATAATCCAGCTCCGACAATCAGAAAGGAAATTCTGGATGAATACCCTGAACTGGCTGATGTAATTA
ATAAACTTCCACCTGTTCTGGACCAAAAAACCCTGACTAACTTAAACAAAGAAGTAGATGTTGACGGTAAAGACCCCGAA
GAGGTTGCACAAAAATTCCTTAAAGAGAAGGGACTTCTTCCCGATGAACCAGAGCTCAAACAGGGGCCTGCCATAACAGT
AGCTTCCAAGATATTTACCGAGCAGCTTATTTTAGGTCACATGTTAATTGATCTCCTAAAAGCCCATGGTTATCCTGTTG
AGGATAGGACAAGCCTGGGAGGCACTCCGGCCCTCCGTAAGGCTCTGGAATCAGGTCAGATTGATGCCTGCTGGGAATAT
ACCGGGACTGTTTTAATGACCGTAATGAAAGAAGACGAGATTACCCAGTCCGACGAAGCATACCAGAAGGTTAAGAAATG
GGATGCTGAGGCTAATAACATTATCTGGTTAGATTACGCCCCTGCCAATAATACCTATACTTTGCTGATGACCAGGAAAA
AGGCTGAAAAGCTTGGTATAAAAACAATTTCTGATCTGGCAAGTTATATAAATGGGGAAGAGAATAAGTAA

Upstream 100 bases:

>100_bases
AAAGATGTCAACTCCCCGGCTATATAGTAAGTAGATATTAACCCGGTGCAGGAGTAGCATAAAAGAGAGAATCACAATAA
TCAAGGAGGGATTAGAGAAA

Downstream 100 bases:

>100_bases
ATATAATAATTAAAAAGCCCTATCCCGGTTATTCTTAAACCGGAAGATAGGGCTTTAATAATATAATAATATTACATGAG
TTTCATTGTTTATAAGAGTG

Product: glycine betaine ABC transporter substrate-binding protein

Products: NA

Alternate protein names: Osmoprotectant-binding protein [H]

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MVKRRFILVLAVLLLGIVLLAGCGDKQEEGQAVIKMGTNVEFLNRDDGIPGLEKAYGFKFDRDALTTMKTGLTYDALRNN
KLDVAMGFATDGRIAAFDLVSLEDDKNYFPVYNPAPTIRKEILDEYPELADVINKLPPVLDQKTLTNLNKEVDVDGKDPE
EVAQKFLKEKGLLPDEPELKQGPAITVASKIFTEQLILGHMLIDLLKAHGYPVEDRTSLGGTPALRKALESGQIDACWEY
TGTVLMTVMKEDEITQSDEAYQKVKKWDAEANNIIWLDYAPANNTYTLLMTRKKAEKLGIKTISDLASYINGEENK

Sequences:

>Translated_316_residues
MVKRRFILVLAVLLLGIVLLAGCGDKQEEGQAVIKMGTNVEFLNRDDGIPGLEKAYGFKFDRDALTTMKTGLTYDALRNN
KLDVAMGFATDGRIAAFDLVSLEDDKNYFPVYNPAPTIRKEILDEYPELADVINKLPPVLDQKTLTNLNKEVDVDGKDPE
EVAQKFLKEKGLLPDEPELKQGPAITVASKIFTEQLILGHMLIDLLKAHGYPVEDRTSLGGTPALRKALESGQIDACWEY
TGTVLMTVMKEDEITQSDEAYQKVKKWDAEANNIIWLDYAPANNTYTLLMTRKKAEKLGIKTISDLASYINGEENK
>Mature_316_residues
MVKRRFILVLAVLLLGIVLLAGCGDKQEEGQAVIKMGTNVEFLNRDDGIPGLEKAYGFKFDRDALTTMKTGLTYDALRNN
KLDVAMGFATDGRIAAFDLVSLEDDKNYFPVYNPAPTIRKEILDEYPELADVINKLPPVLDQKTLTNLNKEVDVDGKDPE
EVAQKFLKEKGLLPDEPELKQGPAITVASKIFTEQLILGHMLIDLLKAHGYPVEDRTSLGGTPALRKALESGQIDACWEY
TGTVLMTVMKEDEITQSDEAYQKVKKWDAEANNIIWLDYAPANNTYTLLMTRKKAEKLGIKTISDLASYINGEENK

Specific function: Member of a high affinity multicomponent binding- protein-dependent transport system for glycine betaine, carnitine, and choline [H]

COG id: COG1732

COG function: function code M; Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788452, Length=150, Percent_Identity=38, Blast_Score=114, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 35233; Mature: 35233

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKRRFILVLAVLLLGIVLLAGCGDKQEEGQAVIKMGTNVEFLNRDDGIPGLEKAYGFKF
CCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCEEEEECCCEEEECCCCCCCCHHHHHCCCC
DRDALTTMKTGLTYDALRNNKLDVAMGFATDGRIAAFDLVSLEDDKNYFPVYNPAPTIRK
CHHHHHHHHHCCCHHHHCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCHHHHH
EILDEYPELADVINKLPPVLDQKTLTNLNKEVDVDGKDPEEVAQKFLKEKGLLPDEPELK
HHHHHHHHHHHHHHHCCCHHCHHHHHHCCCEECCCCCCHHHHHHHHHHHCCCCCCCCCCC
QGPAITVASKIFTEQLILGHMLIDLLKAHGYPVEDRTSLGGTPALRKALESGQIDACWEY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHH
TGTVLMTVMKEDEITQSDEAYQKVKKWDAEANNIIWLDYAPANNTYTLLMTRKKAEKLGI
HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEEHHHHHHHCH
KTISDLASYINGEENK
HHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVKRRFILVLAVLLLGIVLLAGCGDKQEEGQAVIKMGTNVEFLNRDDGIPGLEKAYGFKF
CCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCEEEEECCCEEEECCCCCCCCHHHHHCCCC
DRDALTTMKTGLTYDALRNNKLDVAMGFATDGRIAAFDLVSLEDDKNYFPVYNPAPTIRK
CHHHHHHHHHCCCHHHHCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCHHHHH
EILDEYPELADVINKLPPVLDQKTLTNLNKEVDVDGKDPEEVAQKFLKEKGLLPDEPELK
HHHHHHHHHHHHHHHCCCHHCHHHHHHCCCEECCCCCCHHHHHHHHHHHCCCCCCCCCCC
QGPAITVASKIFTEQLILGHMLIDLLKAHGYPVEDRTSLGGTPALRKALESGQIDACWEY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHH
TGTVLMTVMKEDEITQSDEAYQKVKKWDAEANNIIWLDYAPANNTYTLLMTRKKAEKLGI
HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEEHHHHHHHCH
KTISDLASYINGEENK
HHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10216873; 9384377 [H]