| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932674
Identifier: 220932674
GI number: 220932674
Start: 1963189
End: 1964052
Strand: Reverse
Name: 220932674
Synonym: Hore_18380
Alternate gene names: NA
Gene position: 1964052-1963189 (Counterclockwise)
Preceding gene: 220932675
Following gene: 220932673
Centisome position: 76.18
GC content: 39.35
Gene sequence:
>864_bases ATGAAAATTTCTATTTTAAGCGGCAAAGGTGGAACAGGGAAGACGACTGTAGCTGTTAATATGGCTCTGGCTTTAACCAA TGTCCAGTTGATAGATGCTGATGTCGAAGAACCTAATGACCATTTATTTTTAGATATAACAGATGATGGGCCTTATGAGA GTGTAACCAGGGATATCCCGGTTGTAGATAATGAAAAATGCACCGGATGTCGCAAATGTGTTGATTTTTGTCAGTATAAT GCCCTGGCTTTAATGGCCGACACCCTTCTTGTTTTTCCTGAGATTTGTCATAGCTGTGGGGGCTGTAAGTTAATATGTCC TGCCGGGGCTATCAAAGAAGAGAAACGGGAAGTCGGTAAGCTCAGGGAGTTTAAAATAAACGATAACCTTTATTTTTTCC AGGGTGAGTTAAATACTGGTGAAGAGCAGGCTGTCCCTGTTATTGAAAAACTTAAAAGTAAAATAAATAATAAGAAAACA GTAATTATTGATGCTCCTCCGGGTAGTAGCTGCCCGGCGGTTGAAGCTATAGAAGGTACTGACTTCTGTCTATTGGTTAC TGAACCGACTCCCTTTGGATTACACGATCTGAAGATGGTTGTTGACCTCGTAAAAAAACTTGGCATACCCTCCGGTGTGA TAATAAACCGTGCTGAAGAAGATAGTAACCATATAATAACCAGTTACTGCAGGGAAGAGGGCATCCCGGTTTTAATGAAA ATACCTTTCAGCAAAAAAATTGCTAAATGGTATTCAAACGGGATACCCTTTATTATGGAAGAACCTCAATGGAGCAAAAA ATTTCAGAAATTGTATAGGGAAATAGAGGGGGTTATTCAAAATGAAAAGAGTTACAGTTATTAG
Upstream 100 bases:
>100_bases AAGGTGGTACTATAAAAAAAGCCCTTGAGGAATATGAGAATGGTAATCTTGAAGAAATAACAGGTCCAGTTAAATAAAGT AAGAAATCGGGTGATAAATA
Downstream 100 bases:
>100_bases TGGAAAGGGAGGTACCGGTAAAACAACCCTCTCTGCCAGTCTTGCTGTTTTATCTGAAAATGCAATTATTGCTGACTGTG ATGTGGATGCCCCGAATCTG
Product: Cobyrinic acid ac-diamide synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MKISILSGKGGTGKTTVAVNMALALTNVQLIDADVEEPNDHLFLDITDDGPYESVTRDIPVVDNEKCTGCRKCVDFCQYN ALALMADTLLVFPEICHSCGGCKLICPAGAIKEEKREVGKLREFKINDNLYFFQGELNTGEEQAVPVIEKLKSKINNKKT VIIDAPPGSSCPAVEAIEGTDFCLLVTEPTPFGLHDLKMVVDLVKKLGIPSGVIINRAEEDSNHIITSYCREEGIPVLMK IPFSKKIAKWYSNGIPFIMEEPQWSKKFQKLYREIEGVIQNEKSYSY
Sequences:
>Translated_287_residues MKISILSGKGGTGKTTVAVNMALALTNVQLIDADVEEPNDHLFLDITDDGPYESVTRDIPVVDNEKCTGCRKCVDFCQYN ALALMADTLLVFPEICHSCGGCKLICPAGAIKEEKREVGKLREFKINDNLYFFQGELNTGEEQAVPVIEKLKSKINNKKT VIIDAPPGSSCPAVEAIEGTDFCLLVTEPTPFGLHDLKMVVDLVKKLGIPSGVIINRAEEDSNHIITSYCREEGIPVLMK IPFSKKIAKWYSNGIPFIMEEPQWSKKFQKLYREIEGVIQNEKSYSY >Mature_287_residues MKISILSGKGGTGKTTVAVNMALALTNVQLIDADVEEPNDHLFLDITDDGPYESVTRDIPVVDNEKCTGCRKCVDFCQYN ALALMADTLLVFPEICHSCGGCKLICPAGAIKEEKREVGKLREFKINDNLYFFQGELNTGEEQAVPVIEKLKSKINNKKT VIIDAPPGSSCPAVEAIEGTDFCLLVTEPTPFGLHDLKMVVDLVKKLGIPSGVIINRAEEDSNHIITSYCREEGIPVLMK IPFSKKIAKWYSNGIPFIMEEPQWSKKFQKLYREIEGVIQNEKSYSY
Specific function: Unknown
COG id: COG1149
COG function: function code C; MinD superfamily P-loop ATPase containing an inserted ferredoxin domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 31884; Mature: 31884
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: PS00198 4FE4S_FERREDOXIN ; PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKISILSGKGGTGKTTVAVNMALALTNVQLIDADVEEPNDHLFLDITDDGPYESVTRDIP CEEEEEECCCCCCCEEEEEEEEEEEEEEEEEECCCCCCCCEEEEEEECCCCHHHHHCCCC VVDNEKCTGCRKCVDFCQYNALALMADTLLVFPEICHSCGGCKLICPAGAIKEEKREVGK CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCC LREFKINDNLYFFQGELNTGEEQAVPVIEKLKSKINNKKTVIIDAPPGSSCPAVEAIEGT CEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEECCC DFCLLVTEPTPFGLHDLKMVVDLVKKLGIPSGVIINRAEEDSNHIITSYCREEGIPVLMK CEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHCCCEEEEE IPFSKKIAKWYSNGIPFIMEEPQWSKKFQKLYREIEGVIQNEKSYSY CCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKISILSGKGGTGKTTVAVNMALALTNVQLIDADVEEPNDHLFLDITDDGPYESVTRDIP CEEEEEECCCCCCCEEEEEEEEEEEEEEEEEECCCCCCCCEEEEEEECCCCHHHHHCCCC VVDNEKCTGCRKCVDFCQYNALALMADTLLVFPEICHSCGGCKLICPAGAIKEEKREVGK CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCC LREFKINDNLYFFQGELNTGEEQAVPVIEKLKSKINNKKTVIIDAPPGSSCPAVEAIEGT CEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEECCC DFCLLVTEPTPFGLHDLKMVVDLVKKLGIPSGVIINRAEEDSNHIITSYCREEGIPVLMK CEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHCCCEEEEE IPFSKKIAKWYSNGIPFIMEEPQWSKKFQKLYREIEGVIQNEKSYSY CCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]