Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

Click here to switch to the map view.

The map label for this gene is 220932674

Identifier: 220932674

GI number: 220932674

Start: 1963189

End: 1964052

Strand: Reverse

Name: 220932674

Synonym: Hore_18380

Alternate gene names: NA

Gene position: 1964052-1963189 (Counterclockwise)

Preceding gene: 220932675

Following gene: 220932673

Centisome position: 76.18

GC content: 39.35

Gene sequence:

>864_bases
ATGAAAATTTCTATTTTAAGCGGCAAAGGTGGAACAGGGAAGACGACTGTAGCTGTTAATATGGCTCTGGCTTTAACCAA
TGTCCAGTTGATAGATGCTGATGTCGAAGAACCTAATGACCATTTATTTTTAGATATAACAGATGATGGGCCTTATGAGA
GTGTAACCAGGGATATCCCGGTTGTAGATAATGAAAAATGCACCGGATGTCGCAAATGTGTTGATTTTTGTCAGTATAAT
GCCCTGGCTTTAATGGCCGACACCCTTCTTGTTTTTCCTGAGATTTGTCATAGCTGTGGGGGCTGTAAGTTAATATGTCC
TGCCGGGGCTATCAAAGAAGAGAAACGGGAAGTCGGTAAGCTCAGGGAGTTTAAAATAAACGATAACCTTTATTTTTTCC
AGGGTGAGTTAAATACTGGTGAAGAGCAGGCTGTCCCTGTTATTGAAAAACTTAAAAGTAAAATAAATAATAAGAAAACA
GTAATTATTGATGCTCCTCCGGGTAGTAGCTGCCCGGCGGTTGAAGCTATAGAAGGTACTGACTTCTGTCTATTGGTTAC
TGAACCGACTCCCTTTGGATTACACGATCTGAAGATGGTTGTTGACCTCGTAAAAAAACTTGGCATACCCTCCGGTGTGA
TAATAAACCGTGCTGAAGAAGATAGTAACCATATAATAACCAGTTACTGCAGGGAAGAGGGCATCCCGGTTTTAATGAAA
ATACCTTTCAGCAAAAAAATTGCTAAATGGTATTCAAACGGGATACCCTTTATTATGGAAGAACCTCAATGGAGCAAAAA
ATTTCAGAAATTGTATAGGGAAATAGAGGGGGTTATTCAAAATGAAAAGAGTTACAGTTATTAG

Upstream 100 bases:

>100_bases
AAGGTGGTACTATAAAAAAAGCCCTTGAGGAATATGAGAATGGTAATCTTGAAGAAATAACAGGTCCAGTTAAATAAAGT
AAGAAATCGGGTGATAAATA

Downstream 100 bases:

>100_bases
TGGAAAGGGAGGTACCGGTAAAACAACCCTCTCTGCCAGTCTTGCTGTTTTATCTGAAAATGCAATTATTGCTGACTGTG
ATGTGGATGCCCCGAATCTG

Product: Cobyrinic acid ac-diamide synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MKISILSGKGGTGKTTVAVNMALALTNVQLIDADVEEPNDHLFLDITDDGPYESVTRDIPVVDNEKCTGCRKCVDFCQYN
ALALMADTLLVFPEICHSCGGCKLICPAGAIKEEKREVGKLREFKINDNLYFFQGELNTGEEQAVPVIEKLKSKINNKKT
VIIDAPPGSSCPAVEAIEGTDFCLLVTEPTPFGLHDLKMVVDLVKKLGIPSGVIINRAEEDSNHIITSYCREEGIPVLMK
IPFSKKIAKWYSNGIPFIMEEPQWSKKFQKLYREIEGVIQNEKSYSY

Sequences:

>Translated_287_residues
MKISILSGKGGTGKTTVAVNMALALTNVQLIDADVEEPNDHLFLDITDDGPYESVTRDIPVVDNEKCTGCRKCVDFCQYN
ALALMADTLLVFPEICHSCGGCKLICPAGAIKEEKREVGKLREFKINDNLYFFQGELNTGEEQAVPVIEKLKSKINNKKT
VIIDAPPGSSCPAVEAIEGTDFCLLVTEPTPFGLHDLKMVVDLVKKLGIPSGVIINRAEEDSNHIITSYCREEGIPVLMK
IPFSKKIAKWYSNGIPFIMEEPQWSKKFQKLYREIEGVIQNEKSYSY
>Mature_287_residues
MKISILSGKGGTGKTTVAVNMALALTNVQLIDADVEEPNDHLFLDITDDGPYESVTRDIPVVDNEKCTGCRKCVDFCQYN
ALALMADTLLVFPEICHSCGGCKLICPAGAIKEEKREVGKLREFKINDNLYFFQGELNTGEEQAVPVIEKLKSKINNKKT
VIIDAPPGSSCPAVEAIEGTDFCLLVTEPTPFGLHDLKMVVDLVKKLGIPSGVIINRAEEDSNHIITSYCREEGIPVLMK
IPFSKKIAKWYSNGIPFIMEEPQWSKKFQKLYREIEGVIQNEKSYSY

Specific function: Unknown

COG id: COG1149

COG function: function code C; MinD superfamily P-loop ATPase containing an inserted ferredoxin domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 31884; Mature: 31884

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: PS00198 4FE4S_FERREDOXIN ; PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISILSGKGGTGKTTVAVNMALALTNVQLIDADVEEPNDHLFLDITDDGPYESVTRDIP
CEEEEEECCCCCCCEEEEEEEEEEEEEEEEEECCCCCCCCEEEEEEECCCCHHHHHCCCC
VVDNEKCTGCRKCVDFCQYNALALMADTLLVFPEICHSCGGCKLICPAGAIKEEKREVGK
CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCC
LREFKINDNLYFFQGELNTGEEQAVPVIEKLKSKINNKKTVIIDAPPGSSCPAVEAIEGT
CEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEECCC
DFCLLVTEPTPFGLHDLKMVVDLVKKLGIPSGVIINRAEEDSNHIITSYCREEGIPVLMK
CEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHCCCEEEEE
IPFSKKIAKWYSNGIPFIMEEPQWSKKFQKLYREIEGVIQNEKSYSY
CCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKISILSGKGGTGKTTVAVNMALALTNVQLIDADVEEPNDHLFLDITDDGPYESVTRDIP
CEEEEEECCCCCCCEEEEEEEEEEEEEEEEEECCCCCCCCEEEEEEECCCCHHHHHCCCC
VVDNEKCTGCRKCVDFCQYNALALMADTLLVFPEICHSCGGCKLICPAGAIKEEKREVGK
CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCC
LREFKINDNLYFFQGELNTGEEQAVPVIEKLKSKINNKKTVIIDAPPGSSCPAVEAIEGT
CEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEECCC
DFCLLVTEPTPFGLHDLKMVVDLVKKLGIPSGVIINRAEEDSNHIITSYCREEGIPVLMK
CEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHCCCEEEEE
IPFSKKIAKWYSNGIPFIMEEPQWSKKFQKLYREIEGVIQNEKSYSY
CCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]