| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932673
Identifier: 220932673
GI number: 220932673
Start: 1962345
End: 1963211
Strand: Reverse
Name: 220932673
Synonym: Hore_18370
Alternate gene names: NA
Gene position: 1963211-1962345 (Counterclockwise)
Preceding gene: 220932674
Following gene: 220932672
Centisome position: 76.15
GC content: 40.83
Gene sequence:
>867_bases ATGAAAAGAGTTACAGTTATTAGTGGAAAGGGAGGTACCGGTAAAACAACCCTCTCTGCCAGTCTTGCTGTTTTATCTGA AAATGCAATTATTGCTGACTGTGATGTGGATGCCCCGAATCTGCATTTGCTTCTCAAACCTGAGGTTGTTGAAAAAAGAA CCTTTAAAGGGGGAAAACTGGCGGTAAAAAATCCGGATTTATGTATAGATTGTGGGTACTGCAGGCAGGTCTGTAATTTT AATGCTATTACCCCCGGATTTGAAATAAACCCCATTAAATGTGAAGGGTGTGGGACATGTGTTGCCATGTGTCCACAAGA TGCCCTTGAGCTGAAAGAAGTTGAAACAGGGAATGTTTATATCTCTAAAACAGAGTTTTTGCCGATGGTCCATGCCAGAT TGAATATTGGGGCTGAGAATTCGGGTAAACTGGTCAGTGAGGTAAAAAAACTTGCCGACAATATTGCCGGGAGAGAAGGT AAGGACCTGATTCTGGTAGATGGTCCTCCGGGGATAGGCTGCCCTGTTATTGCCTCTCTCAATGAAGTTGATCTGGCTCT GGTGGTTACCGAGCCCACTAAATCAGGTTTTTCTGATTTGAAGAGGCTGCTTAAAGTAATAAATCATTTCGGCATTACCC CATTAGTTGTAATTAATAAGTATGATTTAAATAAGAATATAAGTAAGGAAATAACCGGGTTTTGCCAGGATAGAGGGATT GAAATAGCCGGTAAAATACCATTCTGCCAGGGAATTGTCAGTGCTTTACGCCTTGGAAAAATTGCTGTAAATTATAACGA AGCCGACAGGGCCAGAATAGCCATTGAAGATATCTGGAATAATGTTAAAAAATATTTAAAGGAGTGA
Upstream 100 bases:
>100_bases GCTAAATGGTATTCAAACGGGATACCCTTTATTATGGAAGAACCTCAATGGAGCAAAAAATTTCAGAAATTGTATAGGGA AATAGAGGGGGTTATTCAAA
Downstream 100 bases:
>100_bases GTATTAATGAAAATTGCTGTTCCCAGTGAAGGTAATAAAATTTCCCCCCATTTTGGAAGATGTTCTCAGTTTACTATTAT CGATGTTAATGATGGTGGTA
Product: Cobyrinic acid ac-diamide synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MKRVTVISGKGGTGKTTLSASLAVLSENAIIADCDVDAPNLHLLLKPEVVEKRTFKGGKLAVKNPDLCIDCGYCRQVCNF NAITPGFEINPIKCEGCGTCVAMCPQDALELKEVETGNVYISKTEFLPMVHARLNIGAENSGKLVSEVKKLADNIAGREG KDLILVDGPPGIGCPVIASLNEVDLALVVTEPTKSGFSDLKRLLKVINHFGITPLVVINKYDLNKNISKEITGFCQDRGI EIAGKIPFCQGIVSALRLGKIAVNYNEADRARIAIEDIWNNVKKYLKE
Sequences:
>Translated_288_residues MKRVTVISGKGGTGKTTLSASLAVLSENAIIADCDVDAPNLHLLLKPEVVEKRTFKGGKLAVKNPDLCIDCGYCRQVCNF NAITPGFEINPIKCEGCGTCVAMCPQDALELKEVETGNVYISKTEFLPMVHARLNIGAENSGKLVSEVKKLADNIAGREG KDLILVDGPPGIGCPVIASLNEVDLALVVTEPTKSGFSDLKRLLKVINHFGITPLVVINKYDLNKNISKEITGFCQDRGI EIAGKIPFCQGIVSALRLGKIAVNYNEADRARIAIEDIWNNVKKYLKE >Mature_288_residues MKRVTVISGKGGTGKTTLSASLAVLSENAIIADCDVDAPNLHLLLKPEVVEKRTFKGGKLAVKNPDLCIDCGYCRQVCNF NAITPGFEINPIKCEGCGTCVAMCPQDALELKEVETGNVYISKTEFLPMVHARLNIGAENSGKLVSEVKKLADNIAGREG KDLILVDGPPGIGCPVIASLNEVDLALVVTEPTKSGFSDLKRLLKVINHFGITPLVVINKYDLNKNISKEITGFCQDRGI EIAGKIPFCQGIVSALRLGKIAVNYNEADRARIAIEDIWNNVKKYLKE
Specific function: Unknown
COG id: COG1149
COG function: function code C; MinD superfamily P-loop ATPase containing an inserted ferredoxin domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 31125; Mature: 31125
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRVTVISGKGGTGKTTLSASLAVLSENAIIADCDVDAPNLHLLLKPEVVEKRTFKGGKL CCEEEEEECCCCCCCEEHHEEEEEEECCCEEEECCCCCCCEEEEECCHHHHHHCCCCCEE AVKNPDLCIDCGYCRQVCNFNAITPGFEINPIKCEGCGTCVAMCPQDALELKEVETGNVY EECCCCEEEECHHHHHHHCCCCCCCCCEECCEEECCCCCEEEECCHHHHHHHEECCCCEE ISKTEFLPMVHARLNIGAENSGKLVSEVKKLADNIAGREGKDLILVDGPPGIGCPVIASL EEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHEECC NEVDLALVVTEPTKSGFSDLKRLLKVINHFGITPLVVINKYDLNKNISKEITGFCQDRGI CCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHCCE EIAGKIPFCQGIVSALRLGKIAVNYNEADRARIAIEDIWNNVKKYLKE EEEECCCHHHHHHHHHHHCEEEEECCCCCHHEEEHHHHHHHHHHHHCC >Mature Secondary Structure MKRVTVISGKGGTGKTTLSASLAVLSENAIIADCDVDAPNLHLLLKPEVVEKRTFKGGKL CCEEEEEECCCCCCCEEHHEEEEEEECCCEEEECCCCCCCEEEEECCHHHHHHCCCCCEE AVKNPDLCIDCGYCRQVCNFNAITPGFEINPIKCEGCGTCVAMCPQDALELKEVETGNVY EECCCCEEEECHHHHHHHCCCCCCCCCEECCEEECCCCCEEEECCHHHHHHHEECCCCEE ISKTEFLPMVHARLNIGAENSGKLVSEVKKLADNIAGREGKDLILVDGPPGIGCPVIASL EEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHEECC NEVDLALVVTEPTKSGFSDLKRLLKVINHFGITPLVVINKYDLNKNISKEITGFCQDRGI CCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHCCE EIAGKIPFCQGIVSALRLGKIAVNYNEADRARIAIEDIWNNVKKYLKE EEEECCCHHHHHHHHHHHCEEEEECCCCCHHEEEHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]