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The map label for this gene is slpA [H]

Identifier: 220932664

GI number: 220932664

Start: 1954389

End: 1954949

Strand: Reverse

Name: slpA [H]

Synonym: Hore_18280

Alternate gene names: 220932664

Gene position: 1954949-1954389 (Counterclockwise)

Preceding gene: 220932665

Following gene: 220932663

Centisome position: 75.83

GC content: 41.18

Gene sequence:

>561_bases
ATGAAGAGGTTAATTGCTTTATTACTGGTAGGTGTTTTGATGTTATCTGCCGTACCAGTATTTGGTGCCGATTTTAAAGA
TGCACCTTCACCGGATCACTGGGTTTATGAAAATTTCCAGGTTTTAAATGAAGCTGGCTTGATTGAAGGGTACCCGGATC
AGACTTTCAGGGGTGATCAGGCCGCTACCCGTTATGAAATGGTTGAAATGACCGCCCGTATACTTAAGTATCTTGAAAGC
AAAGTAGATAAAGAAATTGAAGACAAACTCTATCTCAATGAAGAGATGGTTAAAGATTTAATAAGTGATGCTTTAGCTGA
TCAGAGCAAAGTTGATGAAGTTTACGATGCCCTTACAACCCTGGAAAAAGAATTTAAAGACGAACTTGATGCCATGGGTG
TTAAAGTTACTACCCTGGAGGATGAAGTTGCTTCCCTCCGCAGTGATGTAAATACCCTGAAAGAATCCGGTGATGCCAAG
AAGGCCCTCGACGAAGCCAAAAAAGCCAAGATCATGGCTATAATTGGGATAGTTCTCGGGGTTATTGGTATTGTACGGTA
A

Upstream 100 bases:

>100_bases
TAATGGTGAAAAGGTATTAGAAAATTTTGCAGGATTCTAAGGTTTTATTGTATAATAATATAAAGAATGGTATTGATAAA
TAAAAAGGGGGATATGAGGT

Downstream 100 bases:

>100_bases
TAGTAAAGATAATAGAAAACCGAACTTTAAGGCCTACACCAGTGTAGGCCTTAATTTTATTATATACGGGTTTTAAATCC
TTCAGGCCCCTGTTCTTTAC

Product: S-layer domain-containing protein

Products: NA

Alternate protein names: P100 protein; Surface layer protein [H]

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MKRLIALLLVGVLMLSAVPVFGADFKDAPSPDHWVYENFQVLNEAGLIEGYPDQTFRGDQAATRYEMVEMTARILKYLES
KVDKEIEDKLYLNEEMVKDLISDALADQSKVDEVYDALTTLEKEFKDELDAMGVKVTTLEDEVASLRSDVNTLKESGDAK
KALDEAKKAKIMAIIGIVLGVIGIVR

Sequences:

>Translated_186_residues
MKRLIALLLVGVLMLSAVPVFGADFKDAPSPDHWVYENFQVLNEAGLIEGYPDQTFRGDQAATRYEMVEMTARILKYLES
KVDKEIEDKLYLNEEMVKDLISDALADQSKVDEVYDALTTLEKEFKDELDAMGVKVTTLEDEVASLRSDVNTLKESGDAK
KALDEAKKAKIMAIIGIVLGVIGIVR
>Mature_186_residues
MKRLIALLLVGVLMLSAVPVFGADFKDAPSPDHWVYENFQVLNEAGLIEGYPDQTFRGDQAATRYEMVEMTARILKYLES
KVDKEIEDKLYLNEEMVKDLISDALADQSKVDEVYDALTTLEKEFKDELDAMGVKVTTLEDEVASLRSDVNTLKESGDAK
KALDEAKKAKIMAIIGIVLGVIGIVR

Specific function: The S-layer is a paracrystalline mono-layered assembly of proteins which coat the surface of bacteria [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall, S-layer. Note=This bacterium is covered by a S-layer with hexagonal symmetry (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SLH (S-layer homology) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001119 [H]

Pfam domain/function: PF00395 SLH [H]

EC number: NA

Molecular weight: Translated: 20718; Mature: 20718

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLIALLLVGVLMLSAVPVFGADFKDAPSPDHWVYENFQVLNEAGLIEGYPDQTFRGDQ
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCH
AATRYEMVEMTARILKYLESKVDKEIEDKLYLNEEMVKDLISDALADQSKVDEVYDALTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCHHHHHHHHHHHHH
LEKEFKDELDAMGVKVTTLEDEVASLRSDVNTLKESGDAKKALDEAKKAKIMAIIGIVLG
HHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
VIGIVR
HHHHCC
>Mature Secondary Structure
MKRLIALLLVGVLMLSAVPVFGADFKDAPSPDHWVYENFQVLNEAGLIEGYPDQTFRGDQ
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCH
AATRYEMVEMTARILKYLESKVDKEIEDKLYLNEEMVKDLISDALADQSKVDEVYDALTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCHHHHHHHHHHHHH
LEKEFKDELDAMGVKVTTLEDEVASLRSDVNTLKESGDAKKALDEAKKAKIMAIIGIVLG
HHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
VIGIVR
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA