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The map label for this gene is 220932663

Identifier: 220932663

GI number: 220932663

Start: 1953784

End: 1954191

Strand: Reverse

Name: 220932663

Synonym: Hore_18270

Alternate gene names: NA

Gene position: 1954191-1953784 (Counterclockwise)

Preceding gene: 220932664

Following gene: 220932662

Centisome position: 75.8

GC content: 44.36

Gene sequence:

>408_bases
ATGGCGAGACCACCTAAAGAACGGCGGGTAGAATATATACCGGAGATAAGATATTTTAAACCGGCCGGAATACCGGCAAG
AGATATAAAGGAAGTAAATCTATCAATAGAAGAAGTGGAAGCCATCAGGCTAAAGGATTTAGAAGGCCTGACTCAGGAAG
AATGTGCCCGGAAGATGGAGGTTTCCCGTCCCACCTTTCAGCGGGTTTTAACCGGAGCCAGAGAAAAAATTGCCCGGGCC
CTGATAGAAGGTAAGGCCTTGCGGTTCGAAGGTGGAGATTATAAACTGGCTAAACTTCATGTAAAATGTCACCGGTGTGG
AAATAAGTTTGAGGTTCCTTTTCATCACAGACACCGTTTTTCAAGGCGCTTTTGTCCTGAATGTGATGATGAAAAAAATG
AGGAATAA

Upstream 100 bases:

>100_bases
TACTTACTGACATAAAGTTTGCTATAATTAAATTTAGTAACAGTAAAAACCGTCATATTAAATTATTAAATTAATATATA
TGGAATGGAGAGGAAAAACA

Downstream 100 bases:

>100_bases
GTAGGAAATAATAAATGAAGGATATAGAATATTACTGCATAAGCCTGCCAAAAATTCCTTGACTTTGACTTTATAATTAT
TATATAATTATAAATGTGGA

Product: putative DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MARPPKERRVEYIPEIRYFKPAGIPARDIKEVNLSIEEVEAIRLKDLEGLTQEECARKMEVSRPTFQRVLTGAREKIARA
LIEGKALRFEGGDYKLAKLHVKCHRCGNKFEVPFHHRHRFSRRFCPECDDEKNEE

Sequences:

>Translated_135_residues
MARPPKERRVEYIPEIRYFKPAGIPARDIKEVNLSIEEVEAIRLKDLEGLTQEECARKMEVSRPTFQRVLTGAREKIARA
LIEGKALRFEGGDYKLAKLHVKCHRCGNKFEVPFHHRHRFSRRFCPECDDEKNEE
>Mature_134_residues
ARPPKERRVEYIPEIRYFKPAGIPARDIKEVNLSIEEVEAIRLKDLEGLTQEECARKMEVSRPTFQRVLTGAREKIARAL
IEGKALRFEGGDYKLAKLHVKCHRCGNKFEVPFHHRHRFSRRFCPECDDEKNEE

Specific function: Unknown

COG id: COG1342

COG function: function code R; Predicted DNA-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0251 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1827_HALOH (B8CZ57)

Other databases:

- EMBL:   CP001098
- RefSeq:   YP_002509571.1
- GeneID:   7313825
- GenomeReviews:   CP001098_GR
- KEGG:   hor:Hore_18270
- HOGENOM:   HBG513201
- OMA:   EECAERM
- ProtClustDB:   CLSK2806557
- HAMAP:   MF_00674
- InterPro:   IPR002852

Pfam domain/function: PF02001 DUF134

EC number: NA

Molecular weight: Translated: 15892; Mature: 15760

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARPPKERRVEYIPEIRYFKPAGIPARDIKEVNLSIEEVEAIRLKDLEGLTQEECARKME
CCCCCHHHHHHHCCCCCEECCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHH
VSRPTFQRVLTGAREKIARALIEGKALRFEGGDYKLAKLHVKCHRCGNKFEVPFHHRHRF
CCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEHHHHHHHHHCCCCCCCCCHHHHHH
SRRFCPECDDEKNEE
HHHCCCCCCCCCCCC
>Mature Secondary Structure 
ARPPKERRVEYIPEIRYFKPAGIPARDIKEVNLSIEEVEAIRLKDLEGLTQEECARKME
CCCCHHHHHHHCCCCCEECCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHH
VSRPTFQRVLTGAREKIARALIEGKALRFEGGDYKLAKLHVKCHRCGNKFEVPFHHRHRF
CCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEHHHHHHHHHCCCCCCCCCHHHHHH
SRRFCPECDDEKNEE
HHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA