| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
Click here to switch to the map view.
The map label for this gene is 220932661
Identifier: 220932661
GI number: 220932661
Start: 1949431
End: 1950366
Strand: Reverse
Name: 220932661
Synonym: Hore_18250
Alternate gene names: NA
Gene position: 1950366-1949431 (Counterclockwise)
Preceding gene: 220932662
Following gene: 220932660
Centisome position: 75.65
GC content: 34.29
Gene sequence:
>936_bases TTGAAAAAGCTGTTTAGCCTGATTTTGGTATTGGGCTTAATTTTTGTTATAACAGGATGTGAAAACTTTGGTGTCATTGA AGAAAATGGTTTTGGTGAAGTAATTGTTAAAAAAGCTACTTATCTTGATGACCAGGGTAATGAGGTTGAATATAAAGATG CTACTGTGCTTGTTGGGGATACAGAGGGTAAAGTCGGAGAAGGAATTGCTGTTCCGGCGGGTACTTATGATGTAACTGTA AAAACTGAAATAAATGGGACTGAATATACTACAACAAAAGAAAAGGTATTAGTAGAGGTTGGTGAAACTGTTGTTCTAGA TAAAATACAGATGGAAAAAGTAGTAGCTAATGCTTATAAGTTTGTTTTTGATCCAGCTGAATATGGTATAGAACCTTCTA CAATAGATAATGTTATAGTAGCAGGTGGATTTGGTGAACAGGATGGAGATTTATGGTGGAAGACAGATATAGAGGTATTT TCATTAAATAAACAACTTGATGGTAATACATGGGTAGGTGTGTTTGAAGATAGTATTGTACAAGGTGATGATGAATTTAA ATTTGTAGTAAATGGATCTGAGTGGTATGGTGATCCGGATACTGATAACAATATGGTTGTTTCTGAAAAGGCTACAAAAG TTCTTGCCTGGAAGTTTGTTTTTGATCCTGCTGAATATGGTATAGAACCTTCTACAATAAATAATGTTATAGTAGCAGGT GGATTTGGTGAACAGGATGGAGATTTATGGTGGAAGACAGATATAGATGTATTTTCATTAAACAAACAACTTAATGGTAA TACATGGATAGGTATGTTTGAAGATAGTATTGTACAAGGTGATGATGAATTTAAATTTGTAGTAAATGGATCTGAGTGGT ATGGTGATCCGGATACTGATAACAATATGGTTGTTTCTGAAGTGGCAACTCGGTAA
Upstream 100 bases:
>100_bases TAATGTTTGAAACCTTGTTCTAAGAAATAAATATGTGGAGGCTTTTAAAGCCTCCACTTAATTTCCCTTATATAATATGT TTACTAGAGGAGGGGTACTG
Downstream 100 bases:
>100_bases ATTTCTTCTTCATAATTTATGTAACAGAAGTTCATACCGCAGCCCAGTGTGGCACCCTTAAATAAATAATGTAAGTTTAA TAGATAAACCCCCTGGGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MKKLFSLILVLGLIFVITGCENFGVIEENGFGEVIVKKATYLDDQGNEVEYKDATVLVGDTEGKVGEGIAVPAGTYDVTV KTEINGTEYTTTKEKVLVEVGETVVLDKIQMEKVVANAYKFVFDPAEYGIEPSTIDNVIVAGGFGEQDGDLWWKTDIEVF SLNKQLDGNTWVGVFEDSIVQGDDEFKFVVNGSEWYGDPDTDNNMVVSEKATKVLAWKFVFDPAEYGIEPSTINNVIVAG GFGEQDGDLWWKTDIDVFSLNKQLNGNTWIGMFEDSIVQGDDEFKFVVNGSEWYGDPDTDNNMVVSEVATR
Sequences:
>Translated_311_residues MKKLFSLILVLGLIFVITGCENFGVIEENGFGEVIVKKATYLDDQGNEVEYKDATVLVGDTEGKVGEGIAVPAGTYDVTV KTEINGTEYTTTKEKVLVEVGETVVLDKIQMEKVVANAYKFVFDPAEYGIEPSTIDNVIVAGGFGEQDGDLWWKTDIEVF SLNKQLDGNTWVGVFEDSIVQGDDEFKFVVNGSEWYGDPDTDNNMVVSEKATKVLAWKFVFDPAEYGIEPSTINNVIVAG GFGEQDGDLWWKTDIDVFSLNKQLNGNTWIGMFEDSIVQGDDEFKFVVNGSEWYGDPDTDNNMVVSEVATR >Mature_311_residues MKKLFSLILVLGLIFVITGCENFGVIEENGFGEVIVKKATYLDDQGNEVEYKDATVLVGDTEGKVGEGIAVPAGTYDVTV KTEINGTEYTTTKEKVLVEVGETVVLDKIQMEKVVANAYKFVFDPAEYGIEPSTIDNVIVAGGFGEQDGDLWWKTDIEVF SLNKQLDGNTWVGVFEDSIVQGDDEFKFVVNGSEWYGDPDTDNNMVVSEKATKVLAWKFVFDPAEYGIEPSTINNVIVAG GFGEQDGDLWWKTDIDVFSLNKQLNGNTWIGMFEDSIVQGDDEFKFVVNGSEWYGDPDTDNNMVVSEVATR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34388; Mature: 34388
Theoretical pI: Translated: 3.80; Mature: 3.80
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLFSLILVLGLIFVITGCENFGVIEENGFGEVIVKKATYLDDQGNEVEYKDATVLVGD CHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEEEEEECCCCCEEEECCEEEEEEC TEGKVGEGIAVPAGTYDVTVKTEINGTEYTTTKEKVLVEVGETVVLDKIQMEKVVANAYK CCCCCCCCEEECCCCEEEEEEEEECCCEEECCHHHEEEECCCEEEEHHHHHHHHHHHHHH FVFDPAEYGIEPSTIDNVIVAGGFGEQDGDLWWKTDIEVFSLNKQLDGNTWVGVFEDSIV EEECHHHHCCCCCCCCCEEEECCCCCCCCCEEEEECEEEEEECCCCCCCEEEEEEECCEE QGDDEFKFVVNGSEWYGDPDTDNNMVVSEKATKVLAWKFVFDPAEYGIEPSTINNVIVAG CCCCCEEEEECCCCCCCCCCCCCCEEEECCCCEEEEEEEEECHHHHCCCCCCCCCEEEEC GFGEQDGDLWWKTDIDVFSLNKQLNGNTWIGMFEDSIVQGDDEFKFVVNGSEWYGDPDTD CCCCCCCCEEEEECCEEEEECCCCCCCEEEEEECCCEECCCCCEEEEECCCCCCCCCCCC NNMVVSEVATR CCEEEEEECCC >Mature Secondary Structure MKKLFSLILVLGLIFVITGCENFGVIEENGFGEVIVKKATYLDDQGNEVEYKDATVLVGD CHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEEEEEECCCCCEEEECCEEEEEEC TEGKVGEGIAVPAGTYDVTVKTEINGTEYTTTKEKVLVEVGETVVLDKIQMEKVVANAYK CCCCCCCCEEECCCCEEEEEEEEECCCEEECCHHHEEEECCCEEEEHHHHHHHHHHHHHH FVFDPAEYGIEPSTIDNVIVAGGFGEQDGDLWWKTDIEVFSLNKQLDGNTWVGVFEDSIV EEECHHHHCCCCCCCCCEEEECCCCCCCCCEEEEECEEEEEECCCCCCCEEEEEEECCEE QGDDEFKFVVNGSEWYGDPDTDNNMVVSEKATKVLAWKFVFDPAEYGIEPSTINNVIVAG CCCCCEEEEECCCCCCCCCCCCCCEEEECCCCEEEEEEEEECHHHHCCCCCCCCCEEEEC GFGEQDGDLWWKTDIDVFSLNKQLNGNTWIGMFEDSIVQGDDEFKFVVNGSEWYGDPDTD CCCCCCCCEEEEECCEEEEECCCCCCCEEEEEECCCEECCCCCEEEEECCCCCCCCCCCC NNMVVSEVATR CCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA