| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932651
Identifier: 220932651
GI number: 220932651
Start: 1937076
End: 1937855
Strand: Reverse
Name: 220932651
Synonym: Hore_18150
Alternate gene names: NA
Gene position: 1937855-1937076 (Counterclockwise)
Preceding gene: 220932652
Following gene: 220932650
Centisome position: 75.16
GC content: 39.62
Gene sequence:
>780_bases ATGAAAAAGGTTTATGCTTTTCTTTTAGGCCTGTTGTTTTTTGCTGTAGTTATTGGTTTGCCGGTTGTTGCCGGTGCAGA GGATACTGGTCTTGATAAGGGAGTTCTGGTTGAACTTTCCTTAAAAATAAGTAGAATGGAGAATTTATCATCTTCAGAAA AAGAAGAATTACAGGATGCCCTTCTGGATATGATGTCTGAGGGTCAAGTAGATCCTATAAATGTATTAAACAAACTGGAT AAAGTAATGAACAAGCTTGAGACAAATACGGCTGCAGAGGTTCAACTGAGGCTTATGTCTGAAGTAAATGTTTTAAACCG GGAAGCTGTGCAGAATATGGTTGAGAACGCCAATAAAAATCAGTTGAAAGAGGTAGCTGAAAAAATATGGGAGGCCCTGA AAAATGGCGTTCCTTCTGAAAAAGTAAATAATGCCCTCCAGACCAGGGAAGAAAATATGGAACAGGTCAGAAAACGCCTT GAAGAAATGACTGAAGAACGGGAAAGGTTACGGGAAAGGGACCATGAACAGGAACATAATGAAGAAGATCAGGAAGATAA GGATGGAGATGAAGAGGAGCAGGACGAAGATCAGAGAGAAGGAAAAACCGATGACAATGAAAAAGGAGATAAAAAAGATG ACAGAAGACACGGTAAAAACGACCTGAAAAAAGACAGTGAAGATGATAGTGATGATGACGAGAATGCAAAAGATGATGAG GAAGAGCAGGATGAAGATGATAATGAAGGTCATAAGGGTATAGAACGGGACGAAGACTAG
Upstream 100 bases:
>100_bases TTGCTTGCATTGTATTCTTTATACCTTAATTTTAAGGTCTTTTTAAGGCCCTGTCATTAACATGTTCGGGATTAAATTCA AAATCAGGGAGGGGGTTAAT
Downstream 100 bases:
>100_bases TGTAAAGAGTAAGCGGTAAGTTACGATAAAATATAGATATAGTTCAATAATAATCTGGATAATGAAAAGCCGGCCTGAGG CCGGTTTTTTTATTGATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MKKVYAFLLGLLFFAVVIGLPVVAGAEDTGLDKGVLVELSLKISRMENLSSSEKEELQDALLDMMSEGQVDPINVLNKLD KVMNKLETNTAAEVQLRLMSEVNVLNREAVQNMVENANKNQLKEVAEKIWEALKNGVPSEKVNNALQTREENMEQVRKRL EEMTEERERLRERDHEQEHNEEDQEDKDGDEEEQDEDQREGKTDDNEKGDKKDDRRHGKNDLKKDSEDDSDDDENAKDDE EEQDEDDNEGHKGIERDED
Sequences:
>Translated_259_residues MKKVYAFLLGLLFFAVVIGLPVVAGAEDTGLDKGVLVELSLKISRMENLSSSEKEELQDALLDMMSEGQVDPINVLNKLD KVMNKLETNTAAEVQLRLMSEVNVLNREAVQNMVENANKNQLKEVAEKIWEALKNGVPSEKVNNALQTREENMEQVRKRL EEMTEERERLRERDHEQEHNEEDQEDKDGDEEEQDEDQREGKTDDNEKGDKKDDRRHGKNDLKKDSEDDSDDDENAKDDE EEQDEDDNEGHKGIERDED >Mature_259_residues MKKVYAFLLGLLFFAVVIGLPVVAGAEDTGLDKGVLVELSLKISRMENLSSSEKEELQDALLDMMSEGQVDPINVLNKLD KVMNKLETNTAAEVQLRLMSEVNVLNREAVQNMVENANKNQLKEVAEKIWEALKNGVPSEKVNNALQTREENMEQVRKRL EEMTEERERLRERDHEQEHNEEDQEDKDGDEEEQDEDQREGKTDDNEKGDKKDDRRHGKNDLKKDSEDDSDDDENAKDDE EEQDEDDNEGHKGIERDED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29827; Mature: 29827
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVYAFLLGLLFFAVVIGLPVVAGAEDTGLDKGVLVELSLKISRMENLSSSEKEELQDA CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH LLDMMSEGQVDPINVLNKLDKVMNKLETNTAAEVQLRLMSEVNVLNREAVQNMVENANKN HHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH QLKEVAEKIWEALKNGVPSEKVNNALQTREENMEQVRKRLEEMTEERERLRERDHEQEHN HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC EEDQEDKDGDEEEQDEDQREGKTDDNEKGDKKDDRRHGKNDLKKDSEDDSDDDENAKDDE CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHCCCCCCCCCCCCCCCCCC EEQDEDDNEGHKGIERDED HHCCCCCCHHCCCCCCCCC >Mature Secondary Structure MKKVYAFLLGLLFFAVVIGLPVVAGAEDTGLDKGVLVELSLKISRMENLSSSEKEELQDA CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH LLDMMSEGQVDPINVLNKLDKVMNKLETNTAAEVQLRLMSEVNVLNREAVQNMVENANKN HHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH QLKEVAEKIWEALKNGVPSEKVNNALQTREENMEQVRKRLEEMTEERERLRERDHEQEHN HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC EEDQEDKDGDEEEQDEDQREGKTDDNEKGDKKDDRRHGKNDLKKDSEDDSDDDENAKDDE CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHCCCCCCCCCCCCCCCCCC EEQDEDDNEGHKGIERDED HHCCCCCCHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA