| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
Click here to switch to the map view.
The map label for this gene is 220932624
Identifier: 220932624
GI number: 220932624
Start: 1913896
End: 1914339
Strand: Reverse
Name: 220932624
Synonym: Hore_17880
Alternate gene names: NA
Gene position: 1914339-1913896 (Counterclockwise)
Preceding gene: 220932625
Following gene: 220932623
Centisome position: 74.25
GC content: 39.41
Gene sequence:
>444_bases ATGATACCCGAAAGAGTTGATAACCTGGAACGGGATTTATTTAAGAAGGTTCTGATTATAGCTACTTTCCCCATGGTGGG GCTTATAATAGCCGGCCGTTGGGATGGCCTGCTGGGCCTTCTGGTCGGTATTATCATTAGTTTTTTATTATTCAGGTTAA AGATAATACATATTAACAGGGCCCTGGATATGGATAAGGGCCGTGCTATAAACTATTTAAGAAAACGCTACTTTATTAAC TATATTATATATTTTATAGCCCTGTTTCAGGCATACGAAAAGTCCCGGGTTTATTTTATAGCGACTGCGGTAGGTTTACT CCTCTTAAAATACACCATTCTGGGAACAGGAATTATAGAATATGCCAGTGATTGGTGGCATCGCAAACTAGAACATCTGG AAGAAATAGATAAAAGGAGGAATTGGGATGAATCCCGGACCTAA
Upstream 100 bases:
>100_bases ACCGGAAATGCCTTTAAAATTGGAGGGTTGATCCTGGGAACTGCCAGCGGGTTTTACTCAAATTTTAGACTAATTATGGA CTTTATAGGTGATGATAATA
Downstream 100 bases:
>100_bases GGTAGTAACTCAATTTATGGGGATGCCGATAACCGATACCCTGATTGTTTCCTGGGTAGTGGTTATCCTGTTGATAATAT TTTCAAAGATTGTTACCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MIPERVDNLERDLFKKVLIIATFPMVGLIIAGRWDGLLGLLVGIIISFLLFRLKIIHINRALDMDKGRAINYLRKRYFIN YIIYFIALFQAYEKSRVYFIATAVGLLLLKYTILGTGIIEYASDWWHRKLEHLEEIDKRRNWDESRT
Sequences:
>Translated_147_residues MIPERVDNLERDLFKKVLIIATFPMVGLIIAGRWDGLLGLLVGIIISFLLFRLKIIHINRALDMDKGRAINYLRKRYFIN YIIYFIALFQAYEKSRVYFIATAVGLLLLKYTILGTGIIEYASDWWHRKLEHLEEIDKRRNWDESRT >Mature_147_residues MIPERVDNLERDLFKKVLIIATFPMVGLIIAGRWDGLLGLLVGIIISFLLFRLKIIHINRALDMDKGRAINYLRKRYFIN YIIYFIALFQAYEKSRVYFIATAVGLLLLKYTILGTGIIEYASDWWHRKLEHLEEIDKRRNWDESRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17436; Mature: 17436
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPERVDNLERDLFKKVLIIATFPMVGLIIAGRWDGLLGLLVGIIISFLLFRLKIIHINR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ALDMDKGRAINYLRKRYFINYIIYFIALFQAYEKSRVYFIATAVGLLLLKYTILGTGIIE HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH YASDWWHRKLEHLEEIDKRRNWDESRT HHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MIPERVDNLERDLFKKVLIIATFPMVGLIIAGRWDGLLGLLVGIIISFLLFRLKIIHINR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ALDMDKGRAINYLRKRYFINYIIYFIALFQAYEKSRVYFIATAVGLLLLKYTILGTGIIE HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH YASDWWHRKLEHLEEIDKRRNWDESRT HHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA