Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

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The map label for this gene is 220932596

Identifier: 220932596

GI number: 220932596

Start: 1882073

End: 1882735

Strand: Reverse

Name: 220932596

Synonym: Hore_17600

Alternate gene names: NA

Gene position: 1882735-1882073 (Counterclockwise)

Preceding gene: 220932597

Following gene: 220932595

Centisome position: 73.03

GC content: 39.37

Gene sequence:

>663_bases
ATGAAGAAATATCCTACAGGCATTATTATTGCTTTTCTTCTGGTAATTAACCTGGTTGTGACCTGTAATACCGGGTTGGC
TGCAGATACTTCTCAGGATACAGTAACTATTAAAACAGGGTTATATAAATCTTCTGAAGGGGAGATGTTCCTCTCAAGGG
GGGTTACCATAATAAAAGGGGAGAATAAAATTACCGCTCCCCGGGGTACTTATTACGAAAAAGAAGAGAAGGCCATTCTT
AAAGGTGGGGTTAAACTTACCCGGAAAGACGGGGATATCAATAGTAAAATGCTGACAGTTTTATTAAATAAAGATATTTA
TATTTTTGAGGATAATGTCGAGTTATTTTATCAGGTTAAAGAAAAAGGGGCAGATGGGCCCAAAGAAATGGAGCTTAAGG
CCCCTTATCTTGAATTATCTACTGCTGATAATTCATTTGTGGCCCGCAATGGGGTAACTATCAAGTATGATAACCGGGTT
ATAAAGGGTGATAGAGCGGTCTACAGTGATGAAAAGCAAACCCTGGAGTTGTATGATGATGTAAAGGTCCAGGAAAAGGA
TGGAGACTGGATTCAGAGCAAAAAAGCGGTCTTTAACCTGGAAACAGGTGAATTTGAGGCCGAAGGAGAAGTTGAAATAG
AGCTAAAAATAACCTCCGAATAG

Upstream 100 bases:

>100_bases
GGTCAGGCATATATAGTAATAGCCATGATAAGTTCTGGTCCGGGATAATAATTCAGGTAATAATCTTATATAATAATGGG
TTTTAAGGAAGGGGTTTAAA

Downstream 100 bases:

>100_bases
ATACAACCAATATCCATAAATTGGTTGCTGGATAACATTTACACTCCCTTCCATAGGATGGTATAATAGGGTTTGGATGG
GAGTGGAGGATATGTTTATA

Product: OstA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MKKYPTGIIIAFLLVINLVVTCNTGLAADTSQDTVTIKTGLYKSSEGEMFLSRGVTIIKGENKITAPRGTYYEKEEKAIL
KGGVKLTRKDGDINSKMLTVLLNKDIYIFEDNVELFYQVKEKGADGPKEMELKAPYLELSTADNSFVARNGVTIKYDNRV
IKGDRAVYSDEKQTLELYDDVKVQEKDGDWIQSKKAVFNLETGEFEAEGEVEIELKITSE

Sequences:

>Translated_220_residues
MKKYPTGIIIAFLLVINLVVTCNTGLAADTSQDTVTIKTGLYKSSEGEMFLSRGVTIIKGENKITAPRGTYYEKEEKAIL
KGGVKLTRKDGDINSKMLTVLLNKDIYIFEDNVELFYQVKEKGADGPKEMELKAPYLELSTADNSFVARNGVTIKYDNRV
IKGDRAVYSDEKQTLELYDDVKVQEKDGDWIQSKKAVFNLETGEFEAEGEVEIELKITSE
>Mature_220_residues
MKKYPTGIIIAFLLVINLVVTCNTGLAADTSQDTVTIKTGLYKSSEGEMFLSRGVTIIKGENKITAPRGTYYEKEEKAIL
KGGVKLTRKDGDINSKMLTVLLNKDIYIFEDNVELFYQVKEKGADGPKEMELKAPYLELSTADNSFVARNGVTIKYDNRV
IKGDRAVYSDEKQTLELYDDVKVQEKDGDWIQSKKAVFNLETGEFEAEGEVEIELKITSE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24673; Mature: 24673

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYPTGIIIAFLLVINLVVTCNTGLAADTSQDTVTIKTGLYKSSEGEMFLSRGVTIIKG
CCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEEEECCEECCCCCEEECCCEEEEEC
ENKITAPRGTYYEKEEKAILKGGVKLTRKDGDINSKMLTVLLNKDIYIFEDNVELFYQVK
CCEEECCCCCCCCCHHHHHHHCCEEEEECCCCCCCEEEEEEECCCEEEEECCCEEEEEEE
EKGADGPKEMELKAPYLELSTADNSFVARNGVTIKYDNRVIKGDRAVYSDEKQTLELYDD
HHCCCCCCCEEEECCEEEEECCCCCEEEECCEEEEECCEEEECCCEEECCCCCEEEEECC
VKVQEKDGDWIQSKKAVFNLETGEFEAEGEVEIELKITSE
EEEEECCCCEEECCEEEEEEECCCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MKKYPTGIIIAFLLVINLVVTCNTGLAADTSQDTVTIKTGLYKSSEGEMFLSRGVTIIKG
CCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEEEECCEECCCCCEEECCCEEEEEC
ENKITAPRGTYYEKEEKAILKGGVKLTRKDGDINSKMLTVLLNKDIYIFEDNVELFYQVK
CCEEECCCCCCCCCHHHHHHHCCEEEEECCCCCCCEEEEEEECCCEEEEECCCEEEEEEE
EKGADGPKEMELKAPYLELSTADNSFVARNGVTIKYDNRVIKGDRAVYSDEKQTLELYDD
HHCCCCCCCEEEECCEEEEECCCCCEEEECCEEEEECCEEEECCCEEECCCCCEEEEECC
VKVQEKDGDWIQSKKAVFNLETGEFEAEGEVEIELKITSE
EEEEECCCCEEECCEEEEEEECCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA