Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

Click here to switch to the map view.

The map label for this gene is flgL [H]

Identifier: 220932549

GI number: 220932549

Start: 1829645

End: 1830550

Strand: Reverse

Name: flgL [H]

Synonym: Hore_17130

Alternate gene names: 220932549

Gene position: 1830550-1829645 (Counterclockwise)

Preceding gene: 220932550

Following gene: 220932548

Centisome position: 71.0

GC content: 40.62

Gene sequence:

>906_bases
ATGCGAATTACCAATAATATAATGGTTACCAATTTAAAGAACTATTTACAGCGGGGTATGAAAGCCCTGGATAAATATAA
TAAGAAACTGGCTACCGGGAAGGAGTTTACCTTACCGGAGGAAGACCCGATTGCAACCCAACGGAGCATGATTCTTCACT
CTGCTCTCAAAGCCAATAAACAGTATCAGCGAAATGTAGACCATGCCCAGGACTGGCTTTTGAATACAGAATCAGCCTTA
CATGATGTTAATGATGTCTTGCAGAGGGCTTACCAACTGGCTGAACATGGAGCCAATGATACTGTATCTGATGAAGAGCG
AGAAGCTATTGCTCAGGAAATAGAAGAATTAAACCAGCACCTGGTGCAGCTGGCCAATACAAAGGTTGCCGGTAAATATA
TATTCAGTGGCAGTGCTACGGATACAAAAGCCTATGTGGCTAATTATAATAGTGGGACAGATACCTATACATTTACTCAT
TATCAGGGCGATAATGTTAGTCTAACTGCGGAGATAAGTCCCGGTGTCCCGGTGGATTATAATATTAGTGGAGAGGATGT
TTTTGGTCCTAATGGTGAGCTCTTTAATATTCTGGAGAATTTGCGCCAGAATCTAAAAAACGATAATAGGGATGCTATTG
AAACCCGGATTGGGGAATTAGAAGCAGAGATGGATAATATAATGAAACACTTCTCTATAATCGGAGCCAAGACCAATCGT
CTGGACTTATCGAAAAACAGATTATCCAGTGAGGAACTTAATTTAAATCAATTAATTTCCCGTAACGAAGATGCAGATAT
GGCAGAAACTATAATGAACCTCAAGATGCAGGAAAATGTTTTCAGGGCAACCCTGGCTTCTGGAGCCAGAATCATTCAAC
CGAGCCTGGTTGATTTTATAAGATAA

Upstream 100 bases:

>100_bases
TAAATTTCAGCAGGCCTATAATGCTGCTGCCAAGATGGTTTCCAAAGTTGATGAAATGCTCAATACTTTAATCAATGGTA
TGATATAAGGGGTGTGAAAA

Downstream 100 bases:

>100_bases
AAAAGCTGAAGGGGTGAGGGAAGATGGGACTAAAAATTGAGCAACGTCCTTCCCTTATAGGTGTAAAAAATATCCCGTCC
AGAATGAGGGTAAGGTATGA

Product: flagellar hook-associated protein 3

Products: NA

Alternate protein names: HAP3 [H]

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MRITNNIMVTNLKNYLQRGMKALDKYNKKLATGKEFTLPEEDPIATQRSMILHSALKANKQYQRNVDHAQDWLLNTESAL
HDVNDVLQRAYQLAEHGANDTVSDEEREAIAQEIEELNQHLVQLANTKVAGKYIFSGSATDTKAYVANYNSGTDTYTFTH
YQGDNVSLTAEISPGVPVDYNISGEDVFGPNGELFNILENLRQNLKNDNRDAIETRIGELEAEMDNIMKHFSIIGAKTNR
LDLSKNRLSSEELNLNQLISRNEDADMAETIMNLKMQENVFRATLASGARIIQPSLVDFIR

Sequences:

>Translated_301_residues
MRITNNIMVTNLKNYLQRGMKALDKYNKKLATGKEFTLPEEDPIATQRSMILHSALKANKQYQRNVDHAQDWLLNTESAL
HDVNDVLQRAYQLAEHGANDTVSDEEREAIAQEIEELNQHLVQLANTKVAGKYIFSGSATDTKAYVANYNSGTDTYTFTH
YQGDNVSLTAEISPGVPVDYNISGEDVFGPNGELFNILENLRQNLKNDNRDAIETRIGELEAEMDNIMKHFSIIGAKTNR
LDLSKNRLSSEELNLNQLISRNEDADMAETIMNLKMQENVFRATLASGARIIQPSLVDFIR
>Mature_301_residues
MRITNNIMVTNLKNYLQRGMKALDKYNKKLATGKEFTLPEEDPIATQRSMILHSALKANKQYQRNVDHAQDWLLNTESAL
HDVNDVLQRAYQLAEHGANDTVSDEEREAIAQEIEELNQHLVQLANTKVAGKYIFSGSATDTKAYVANYNSGTDTYTFTH
YQGDNVSLTAEISPGVPVDYNISGEDVFGPNGELFNILENLRQNLKNDNRDAIETRIGELEAEMDNIMKHFSIIGAKTNR
LDLSKNRLSSEELNLNQLISRNEDADMAETIMNLKMQENVFRATLASGARIIQPSLVDFIR

Specific function: Unknown

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1787324, Length=285, Percent_Identity=25.6140350877193, Blast_Score=78, Evalue=7e-16,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013384
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 33970; Mature: 33970

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRITNNIMVTNLKNYLQRGMKALDKYNKKLATGKEFTLPEEDPIATQRSMILHSALKANK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
QYQRNVDHAQDWLLNTESALHDVNDVLQRAYQLAEHGANDTVSDEEREAIAQEIEELNQH
HHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
LVQLANTKVAGKYIFSGSATDTKAYVANYNSGTDTYTFTHYQGDNVSLTAEISPGVPVDY
HHHHHCCCCCCEEEECCCCCCCCCEEEECCCCCCCEEEEEEECCCEEEEEEECCCCCEEE
NISGEDVFGPNGELFNILENLRQNLKNDNRDAIETRIGELEAEMDNIMKHFSIIGAKTNR
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LDLSKNRLSSEELNLNQLISRNEDADMAETIMNLKMQENVFRATLASGARIIQPSLVDFI
CCCHHHHCCHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCHHHHHHC
R
C
>Mature Secondary Structure
MRITNNIMVTNLKNYLQRGMKALDKYNKKLATGKEFTLPEEDPIATQRSMILHSALKANK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
QYQRNVDHAQDWLLNTESALHDVNDVLQRAYQLAEHGANDTVSDEEREAIAQEIEELNQH
HHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
LVQLANTKVAGKYIFSGSATDTKAYVANYNSGTDTYTFTHYQGDNVSLTAEISPGVPVDY
HHHHHCCCCCCEEEECCCCCCCCCEEEECCCCCCCEEEEEEECCCEEEEEEECCCCCEEE
NISGEDVFGPNGELFNILENLRQNLKNDNRDAIETRIGELEAEMDNIMKHFSIIGAKTNR
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LDLSKNRLSSEELNLNQLISRNEDADMAETIMNLKMQENVFRATLASGARIIQPSLVDFI
CCCHHHHCCHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCHHHHHHC
R
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]