| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is flgL [H]
Identifier: 220932549
GI number: 220932549
Start: 1829645
End: 1830550
Strand: Reverse
Name: flgL [H]
Synonym: Hore_17130
Alternate gene names: 220932549
Gene position: 1830550-1829645 (Counterclockwise)
Preceding gene: 220932550
Following gene: 220932548
Centisome position: 71.0
GC content: 40.62
Gene sequence:
>906_bases ATGCGAATTACCAATAATATAATGGTTACCAATTTAAAGAACTATTTACAGCGGGGTATGAAAGCCCTGGATAAATATAA TAAGAAACTGGCTACCGGGAAGGAGTTTACCTTACCGGAGGAAGACCCGATTGCAACCCAACGGAGCATGATTCTTCACT CTGCTCTCAAAGCCAATAAACAGTATCAGCGAAATGTAGACCATGCCCAGGACTGGCTTTTGAATACAGAATCAGCCTTA CATGATGTTAATGATGTCTTGCAGAGGGCTTACCAACTGGCTGAACATGGAGCCAATGATACTGTATCTGATGAAGAGCG AGAAGCTATTGCTCAGGAAATAGAAGAATTAAACCAGCACCTGGTGCAGCTGGCCAATACAAAGGTTGCCGGTAAATATA TATTCAGTGGCAGTGCTACGGATACAAAAGCCTATGTGGCTAATTATAATAGTGGGACAGATACCTATACATTTACTCAT TATCAGGGCGATAATGTTAGTCTAACTGCGGAGATAAGTCCCGGTGTCCCGGTGGATTATAATATTAGTGGAGAGGATGT TTTTGGTCCTAATGGTGAGCTCTTTAATATTCTGGAGAATTTGCGCCAGAATCTAAAAAACGATAATAGGGATGCTATTG AAACCCGGATTGGGGAATTAGAAGCAGAGATGGATAATATAATGAAACACTTCTCTATAATCGGAGCCAAGACCAATCGT CTGGACTTATCGAAAAACAGATTATCCAGTGAGGAACTTAATTTAAATCAATTAATTTCCCGTAACGAAGATGCAGATAT GGCAGAAACTATAATGAACCTCAAGATGCAGGAAAATGTTTTCAGGGCAACCCTGGCTTCTGGAGCCAGAATCATTCAAC CGAGCCTGGTTGATTTTATAAGATAA
Upstream 100 bases:
>100_bases TAAATTTCAGCAGGCCTATAATGCTGCTGCCAAGATGGTTTCCAAAGTTGATGAAATGCTCAATACTTTAATCAATGGTA TGATATAAGGGGTGTGAAAA
Downstream 100 bases:
>100_bases AAAAGCTGAAGGGGTGAGGGAAGATGGGACTAAAAATTGAGCAACGTCCTTCCCTTATAGGTGTAAAAAATATCCCGTCC AGAATGAGGGTAAGGTATGA
Product: flagellar hook-associated protein 3
Products: NA
Alternate protein names: HAP3 [H]
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MRITNNIMVTNLKNYLQRGMKALDKYNKKLATGKEFTLPEEDPIATQRSMILHSALKANKQYQRNVDHAQDWLLNTESAL HDVNDVLQRAYQLAEHGANDTVSDEEREAIAQEIEELNQHLVQLANTKVAGKYIFSGSATDTKAYVANYNSGTDTYTFTH YQGDNVSLTAEISPGVPVDYNISGEDVFGPNGELFNILENLRQNLKNDNRDAIETRIGELEAEMDNIMKHFSIIGAKTNR LDLSKNRLSSEELNLNQLISRNEDADMAETIMNLKMQENVFRATLASGARIIQPSLVDFIR
Sequences:
>Translated_301_residues MRITNNIMVTNLKNYLQRGMKALDKYNKKLATGKEFTLPEEDPIATQRSMILHSALKANKQYQRNVDHAQDWLLNTESAL HDVNDVLQRAYQLAEHGANDTVSDEEREAIAQEIEELNQHLVQLANTKVAGKYIFSGSATDTKAYVANYNSGTDTYTFTH YQGDNVSLTAEISPGVPVDYNISGEDVFGPNGELFNILENLRQNLKNDNRDAIETRIGELEAEMDNIMKHFSIIGAKTNR LDLSKNRLSSEELNLNQLISRNEDADMAETIMNLKMQENVFRATLASGARIIQPSLVDFIR >Mature_301_residues MRITNNIMVTNLKNYLQRGMKALDKYNKKLATGKEFTLPEEDPIATQRSMILHSALKANKQYQRNVDHAQDWLLNTESAL HDVNDVLQRAYQLAEHGANDTVSDEEREAIAQEIEELNQHLVQLANTKVAGKYIFSGSATDTKAYVANYNSGTDTYTFTH YQGDNVSLTAEISPGVPVDYNISGEDVFGPNGELFNILENLRQNLKNDNRDAIETRIGELEAEMDNIMKHFSIIGAKTNR LDLSKNRLSSEELNLNQLISRNEDADMAETIMNLKMQENVFRATLASGARIIQPSLVDFIR
Specific function: Unknown
COG id: COG1344
COG function: function code N; Flagellin and related hook-associated proteins
Gene ontology:
Cell location: Secreted. Bacterial flagellum [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial flagellin family [H]
Homologues:
Organism=Escherichia coli, GI1787324, Length=285, Percent_Identity=25.6140350877193, Blast_Score=78, Evalue=7e-16,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013384 - InterPro: IPR001029 [H]
Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]
EC number: NA
Molecular weight: Translated: 33970; Mature: 33970
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRITNNIMVTNLKNYLQRGMKALDKYNKKLATGKEFTLPEEDPIATQRSMILHSALKANK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH QYQRNVDHAQDWLLNTESALHDVNDVLQRAYQLAEHGANDTVSDEEREAIAQEIEELNQH HHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH LVQLANTKVAGKYIFSGSATDTKAYVANYNSGTDTYTFTHYQGDNVSLTAEISPGVPVDY HHHHHCCCCCCEEEECCCCCCCCCEEEECCCCCCCEEEEEEECCCEEEEEEECCCCCEEE NISGEDVFGPNGELFNILENLRQNLKNDNRDAIETRIGELEAEMDNIMKHFSIIGAKTNR CCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC LDLSKNRLSSEELNLNQLISRNEDADMAETIMNLKMQENVFRATLASGARIIQPSLVDFI CCCHHHHCCHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCHHHHHHC R C >Mature Secondary Structure MRITNNIMVTNLKNYLQRGMKALDKYNKKLATGKEFTLPEEDPIATQRSMILHSALKANK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH QYQRNVDHAQDWLLNTESALHDVNDVLQRAYQLAEHGANDTVSDEEREAIAQEIEELNQH HHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH LVQLANTKVAGKYIFSGSATDTKAYVANYNSGTDTYTFTHYQGDNVSLTAEISPGVPVDY HHHHHCCCCCCEEEECCCCCCCCCEEEECCCCCCCEEEEEEECCCEEEEEEECCCCCEEE NISGEDVFGPNGELFNILENLRQNLKNDNRDAIETRIGELEAEMDNIMKHFSIIGAKTNR CCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC LDLSKNRLSSEELNLNQLISRNEDADMAETIMNLKMQENVFRATLASGARIIQPSLVDFI CCCHHHHCCHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCHHHHHHC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]