Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

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The map label for this gene is 220932548

Identifier: 220932548

GI number: 220932548

Start: 1829049

End: 1829621

Strand: Reverse

Name: 220932548

Synonym: Hore_17120

Alternate gene names: NA

Gene position: 1829621-1829049 (Counterclockwise)

Preceding gene: 220932549

Following gene: 220932547

Centisome position: 70.97

GC content: 36.13

Gene sequence:

>573_bases
ATGGGACTAAAAATTGAGCAACGTCCTTCCCTTATAGGTGTAAAAAATATCCCGTCCAGAATGAGGGTAAGGTATGATCT
GGCCCATAATTTTAAAATCAAATCCAGATTTTCCAGGGTTTATATTGATTCCACCACGCCAAGGGTTCATATAGACCAGA
AGAAAATCAAAGAAGCTATCGGTTATTATAAACCTATGAGTTTTATTAAGGTAAAGAAACAGGAAAATATCCAGAAAGGG
ATTAAAAAGATTAATTCAATACATAAGGAGAAACATATTTTAAAAGCTATTGCCAATAAGGGTAAAGTAGACCCTGAAGT
AATTCGAGATAAGGTTCTTAAAGATAAACCGGCGCTTAATACAAAACCTGGGTTTATGCCCAAAAACAAGCCTGAGGTCA
GATTTGACCTGGGTCAGGTTAATATTAAAGCTACCAAACCCTTCTTAAAGGTTTATAGCCGCCCAAATTTCCCGGATATA
GATTATAAACCCGGAGATGCAATAATATACTTGCGTCAGAAAGGGTATGTAAAGGTTGACTATGTGGGGAAGAAAGTTAA
TCGTTTAATGTGA

Upstream 100 bases:

>100_bases
AGGAAAATGTTTTCAGGGCAACCCTGGCTTCTGGAGCCAGAATCATTCAACCGAGCCTGGTTGATTTTATAAGATAAAAA
AGCTGAAGGGGTGAGGGAAG

Downstream 100 bases:

>100_bases
GTGATTTATTATTTTAAGAAGTATCTCTGTTAAATTTGAACTCAAGGGTGCTGGTATTAATGAAACTCGATATAGAGACT
ACCTACAGTAAAATAGGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MGLKIEQRPSLIGVKNIPSRMRVRYDLAHNFKIKSRFSRVYIDSTTPRVHIDQKKIKEAIGYYKPMSFIKVKKQENIQKG
IKKINSIHKEKHILKAIANKGKVDPEVIRDKVLKDKPALNTKPGFMPKNKPEVRFDLGQVNIKATKPFLKVYSRPNFPDI
DYKPGDAIIYLRQKGYVKVDYVGKKVNRLM

Sequences:

>Translated_190_residues
MGLKIEQRPSLIGVKNIPSRMRVRYDLAHNFKIKSRFSRVYIDSTTPRVHIDQKKIKEAIGYYKPMSFIKVKKQENIQKG
IKKINSIHKEKHILKAIANKGKVDPEVIRDKVLKDKPALNTKPGFMPKNKPEVRFDLGQVNIKATKPFLKVYSRPNFPDI
DYKPGDAIIYLRQKGYVKVDYVGKKVNRLM
>Mature_189_residues
GLKIEQRPSLIGVKNIPSRMRVRYDLAHNFKIKSRFSRVYIDSTTPRVHIDQKKIKEAIGYYKPMSFIKVKKQENIQKGI
KKINSIHKEKHILKAIANKGKVDPEVIRDKVLKDKPALNTKPGFMPKNKPEVRFDLGQVNIKATKPFLKVYSRPNFPDID
YKPGDAIIYLRQKGYVKVDYVGKKVNRLM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22090; Mature: 21958

Theoretical pI: Translated: 10.93; Mature: 10.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLKIEQRPSLIGVKNIPSRMRVRYDLAHNFKIKSRFSRVYIDSTTPRVHIDQKKIKEAI
CCCCCCCCCCEEECCCCCHHHEEEEHHHCCEEHCCCEEEEEEECCCCEEEECHHHHHHHH
GYYKPMSFIKVKKQENIQKGIKKINSIHKEKHILKAIANKGKVDPEVIRDKVLKDKPALN
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC
TKPGFMPKNKPEVRFDLGQVNIKATKPFLKVYSRPNFPDIDYKPGDAIIYLRQKGYVKVD
CCCCCCCCCCCCEEEEECEEEEEECCHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEEEE
YVGKKVNRLM
ECCHHHHHCC
>Mature Secondary Structure 
GLKIEQRPSLIGVKNIPSRMRVRYDLAHNFKIKSRFSRVYIDSTTPRVHIDQKKIKEAI
CCCCCCCCCEEECCCCCHHHEEEEHHHCCEEHCCCEEEEEEECCCCEEEECHHHHHHHH
GYYKPMSFIKVKKQENIQKGIKKINSIHKEKHILKAIANKGKVDPEVIRDKVLKDKPALN
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC
TKPGFMPKNKPEVRFDLGQVNIKATKPFLKVYSRPNFPDIDYKPGDAIIYLRQKGYVKVD
CCCCCCCCCCCCEEEEECEEEEEECCHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEEEE
YVGKKVNRLM
ECCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA