| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932548
Identifier: 220932548
GI number: 220932548
Start: 1829049
End: 1829621
Strand: Reverse
Name: 220932548
Synonym: Hore_17120
Alternate gene names: NA
Gene position: 1829621-1829049 (Counterclockwise)
Preceding gene: 220932549
Following gene: 220932547
Centisome position: 70.97
GC content: 36.13
Gene sequence:
>573_bases ATGGGACTAAAAATTGAGCAACGTCCTTCCCTTATAGGTGTAAAAAATATCCCGTCCAGAATGAGGGTAAGGTATGATCT GGCCCATAATTTTAAAATCAAATCCAGATTTTCCAGGGTTTATATTGATTCCACCACGCCAAGGGTTCATATAGACCAGA AGAAAATCAAAGAAGCTATCGGTTATTATAAACCTATGAGTTTTATTAAGGTAAAGAAACAGGAAAATATCCAGAAAGGG ATTAAAAAGATTAATTCAATACATAAGGAGAAACATATTTTAAAAGCTATTGCCAATAAGGGTAAAGTAGACCCTGAAGT AATTCGAGATAAGGTTCTTAAAGATAAACCGGCGCTTAATACAAAACCTGGGTTTATGCCCAAAAACAAGCCTGAGGTCA GATTTGACCTGGGTCAGGTTAATATTAAAGCTACCAAACCCTTCTTAAAGGTTTATAGCCGCCCAAATTTCCCGGATATA GATTATAAACCCGGAGATGCAATAATATACTTGCGTCAGAAAGGGTATGTAAAGGTTGACTATGTGGGGAAGAAAGTTAA TCGTTTAATGTGA
Upstream 100 bases:
>100_bases AGGAAAATGTTTTCAGGGCAACCCTGGCTTCTGGAGCCAGAATCATTCAACCGAGCCTGGTTGATTTTATAAGATAAAAA AGCTGAAGGGGTGAGGGAAG
Downstream 100 bases:
>100_bases GTGATTTATTATTTTAAGAAGTATCTCTGTTAAATTTGAACTCAAGGGTGCTGGTATTAATGAAACTCGATATAGAGACT ACCTACAGTAAAATAGGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MGLKIEQRPSLIGVKNIPSRMRVRYDLAHNFKIKSRFSRVYIDSTTPRVHIDQKKIKEAIGYYKPMSFIKVKKQENIQKG IKKINSIHKEKHILKAIANKGKVDPEVIRDKVLKDKPALNTKPGFMPKNKPEVRFDLGQVNIKATKPFLKVYSRPNFPDI DYKPGDAIIYLRQKGYVKVDYVGKKVNRLM
Sequences:
>Translated_190_residues MGLKIEQRPSLIGVKNIPSRMRVRYDLAHNFKIKSRFSRVYIDSTTPRVHIDQKKIKEAIGYYKPMSFIKVKKQENIQKG IKKINSIHKEKHILKAIANKGKVDPEVIRDKVLKDKPALNTKPGFMPKNKPEVRFDLGQVNIKATKPFLKVYSRPNFPDI DYKPGDAIIYLRQKGYVKVDYVGKKVNRLM >Mature_189_residues GLKIEQRPSLIGVKNIPSRMRVRYDLAHNFKIKSRFSRVYIDSTTPRVHIDQKKIKEAIGYYKPMSFIKVKKQENIQKGI KKINSIHKEKHILKAIANKGKVDPEVIRDKVLKDKPALNTKPGFMPKNKPEVRFDLGQVNIKATKPFLKVYSRPNFPDID YKPGDAIIYLRQKGYVKVDYVGKKVNRLM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22090; Mature: 21958
Theoretical pI: Translated: 10.93; Mature: 10.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLKIEQRPSLIGVKNIPSRMRVRYDLAHNFKIKSRFSRVYIDSTTPRVHIDQKKIKEAI CCCCCCCCCCEEECCCCCHHHEEEEHHHCCEEHCCCEEEEEEECCCCEEEECHHHHHHHH GYYKPMSFIKVKKQENIQKGIKKINSIHKEKHILKAIANKGKVDPEVIRDKVLKDKPALN HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC TKPGFMPKNKPEVRFDLGQVNIKATKPFLKVYSRPNFPDIDYKPGDAIIYLRQKGYVKVD CCCCCCCCCCCCEEEEECEEEEEECCHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEEEE YVGKKVNRLM ECCHHHHHCC >Mature Secondary Structure GLKIEQRPSLIGVKNIPSRMRVRYDLAHNFKIKSRFSRVYIDSTTPRVHIDQKKIKEAI CCCCCCCCCEEECCCCCHHHEEEEHHHCCEEHCCCEEEEEEECCCCEEEECHHHHHHHH GYYKPMSFIKVKKQENIQKGIKKINSIHKEKHILKAIANKGKVDPEVIRDKVLKDKPALN HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC TKPGFMPKNKPEVRFDLGQVNIKATKPFLKVYSRPNFPDIDYKPGDAIIYLRQKGYVKVD CCCCCCCCCCCCEEEEECEEEEEECCHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEEEE YVGKKVNRLM ECCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA