Click here to switch to the map view.

The map label for this gene is 220932540

Identifier: 220932540

GI number: 220932540

Start: 1821992

End: 1823848

Strand: Reverse

Name: 220932540

Synonym: Hore_17040

Alternate gene names: NA

Gene position: 1823848-1821992 (Counterclockwise)

Preceding gene: 220932541

Following gene: 220932539

Centisome position: 70.74

GC content: 30.69

Gene sequence:

>1857_bases
ATGGACAAAAATTTATTCAACAAAAATATGCAGGCAATGGCTAAGTATAATATATCTTTGTATCAAAAATTATGTAATTT
TAATCCTGACAGTGACAAATTTTTACTGGATAAAGCTAGAAACGGGAGTCCTACCTTGAAAATTAAAGAAGGGAAAACCA
CCAGGTTGGTTCATAGTCGATATAATCCTGAAAGGGAGGCTGATAAATGGGTTAAAAAGATTAATTTTAAAGGGAGAAAA
AAAATTTTCTTTCTTGGGCTTGGCCTCGGGTATCATTTAAGATTTTTGCTGGAAAGAAAAAAAGGTATTGATTATATTAT
TGTAATTGAACCTGAATTATCAACATTATACTGGAGTTTTCATATATATGATTATTCTAATTATATTCGTGAAAATAAAT
TAATATTTGTTTATAGTAAAGGTGAAAATGAAAATTATATCAGACAGGTATTAGCCAGTATTGATATGCTTAATATGAAA
ACCTTTTTTTCAGTAACTACCCCTTTGACTGGAATATACCACAAAGATGTTTTTGCAAAACTGAATAGTTTTATAAAAGA
TCATCTTATAAGCTGTATTATTAATTTTAATACAACTGTAACGTTTAAATATAATTGGTTAAATAATTTTAAACACAATA
TGACTTATCTATTTCAACATCCTGGAATAGATGTCTTAAAAAATAAATTTGTGAAATTCCCGGCTATTATTGTATCTGCA
GGTCCTTCACTGGATAAAAATATTCATTTATTAAAACAGGCTAAAGATAAGGCTGTAATTATTGGTGTTGGTACATCACT
TAAGGCAATACAAAATACTGGAGTTAGACCTGATATAGTTGTTTCCGTTGACCCTGCTGAGGCCAACTGGAAACATTTCC
AAAGTACTGATTATGATGATGTTTATCTGGTGGGAGATATATTGAGTTATTATAAAATACTTGACCAGCATAATGGTAAA
AAATTTTTCTTTTCCACTTCGGCATACAATGTAATTCAAAAATTATTACCAGATGAATATGGTTTACCACCACTTAGAGG
TGGAGGTTCTGTTTCGCATTCTGCTATGGAGCTTGCTCTGTTAATGGGGTGTGAGCCCGTAATTTTTATAGGGCAGGATC
TTGCCATTAAAGAAGATGGAACTACCCATGCTTCAAATACAATTTACAGTGTAGAGAAAGATGAATCTGGGGAAAGTTTA
ATGGAGGTAGAAGGAATAGATGGTACAAATGTTGAAACTCCTGTGCGTTTTTATTCATTTCTAAGATGGTTTGAAAAAAG
ATTAGCAATGCTTCCTGAAAAAAAGCTTATTATCGATGCTACTGAAGGTGGTGCAAAGATTAAGGGCACAAAAGTAATGG
ACTTTAAAGATGCTCTCGATAAGTACTGTAATACACGGGCAGATATTTACAGTAAACTAGATGAATTACATAGACAGTTT
TGCTCCAGGAAAAAGGAAGTGTTAATTAAACATTTTAAAGAAAATATTAGTAATTTAAATTGTCTTAAAAAGCTTGCAGA
AGAAGGTTTGGAGATGATTCCTGATGAAGATAAAATTTTGTTTAATATAAAAGAAGTGGAGCTACAGGATTTATTTTTGC
AACTTGAGGATATTGAATCTCGGATTAAAAAGGGACAATCTGTTAATCAATTAAGTGAAGTGATTGCATTTTCAGAAGTA
AGTCGAATATTAAATAATGAGGAAATTGATGAGACTATTATTAATGGTGGGCATGAAGAAAAAGTTGCTGCTATATTAAA
CCAATCCAGAGAATTGTTCTCTGCTTTAATTAATATATACAGTACAATGGAAGATTATCTTGAAGATTTATTAGATTTGT
TAAATGAAAGTAAATAA

Upstream 100 bases:

>100_bases
GGATTTGTTTGAGTATGAAATAGTTCCTAAACTTGAGAAATGGCAGAATTTAAATCAAAAAATAAAGGAACTGTATTTGT
AGAAATAAAGGTGGTTAAAA

Downstream 100 bases:

>100_bases
GGGGTGAGTTTTTATGCCAGAAAATCCTTACCAGAAATATAAAAAAACCAGGTTTGAAACTGCAAACAGGGAAAAATTGA
TTTTAATGCTTTATGAAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Repeat-Containing Protein; PseD Protein

Number of amino acids: Translated: 618; Mature: 618

Protein sequence:

>618_residues
MDKNLFNKNMQAMAKYNISLYQKLCNFNPDSDKFLLDKARNGSPTLKIKEGKTTRLVHSRYNPEREADKWVKKINFKGRK
KIFFLGLGLGYHLRFLLERKKGIDYIIVIEPELSTLYWSFHIYDYSNYIRENKLIFVYSKGENENYIRQVLASIDMLNMK
TFFSVTTPLTGIYHKDVFAKLNSFIKDHLISCIINFNTTVTFKYNWLNNFKHNMTYLFQHPGIDVLKNKFVKFPAIIVSA
GPSLDKNIHLLKQAKDKAVIIGVGTSLKAIQNTGVRPDIVVSVDPAEANWKHFQSTDYDDVYLVGDILSYYKILDQHNGK
KFFFSTSAYNVIQKLLPDEYGLPPLRGGGSVSHSAMELALLMGCEPVIFIGQDLAIKEDGTTHASNTIYSVEKDESGESL
MEVEGIDGTNVETPVRFYSFLRWFEKRLAMLPEKKLIIDATEGGAKIKGTKVMDFKDALDKYCNTRADIYSKLDELHRQF
CSRKKEVLIKHFKENISNLNCLKKLAEEGLEMIPDEDKILFNIKEVELQDLFLQLEDIESRIKKGQSVNQLSEVIAFSEV
SRILNNEEIDETIINGGHEEKVAAILNQSRELFSALINIYSTMEDYLEDLLDLLNESK

Sequences:

>Translated_618_residues
MDKNLFNKNMQAMAKYNISLYQKLCNFNPDSDKFLLDKARNGSPTLKIKEGKTTRLVHSRYNPEREADKWVKKINFKGRK
KIFFLGLGLGYHLRFLLERKKGIDYIIVIEPELSTLYWSFHIYDYSNYIRENKLIFVYSKGENENYIRQVLASIDMLNMK
TFFSVTTPLTGIYHKDVFAKLNSFIKDHLISCIINFNTTVTFKYNWLNNFKHNMTYLFQHPGIDVLKNKFVKFPAIIVSA
GPSLDKNIHLLKQAKDKAVIIGVGTSLKAIQNTGVRPDIVVSVDPAEANWKHFQSTDYDDVYLVGDILSYYKILDQHNGK
KFFFSTSAYNVIQKLLPDEYGLPPLRGGGSVSHSAMELALLMGCEPVIFIGQDLAIKEDGTTHASNTIYSVEKDESGESL
MEVEGIDGTNVETPVRFYSFLRWFEKRLAMLPEKKLIIDATEGGAKIKGTKVMDFKDALDKYCNTRADIYSKLDELHRQF
CSRKKEVLIKHFKENISNLNCLKKLAEEGLEMIPDEDKILFNIKEVELQDLFLQLEDIESRIKKGQSVNQLSEVIAFSEV
SRILNNEEIDETIINGGHEEKVAAILNQSRELFSALINIYSTMEDYLEDLLDLLNESK
>Mature_618_residues
MDKNLFNKNMQAMAKYNISLYQKLCNFNPDSDKFLLDKARNGSPTLKIKEGKTTRLVHSRYNPEREADKWVKKINFKGRK
KIFFLGLGLGYHLRFLLERKKGIDYIIVIEPELSTLYWSFHIYDYSNYIRENKLIFVYSKGENENYIRQVLASIDMLNMK
TFFSVTTPLTGIYHKDVFAKLNSFIKDHLISCIINFNTTVTFKYNWLNNFKHNMTYLFQHPGIDVLKNKFVKFPAIIVSA
GPSLDKNIHLLKQAKDKAVIIGVGTSLKAIQNTGVRPDIVVSVDPAEANWKHFQSTDYDDVYLVGDILSYYKILDQHNGK
KFFFSTSAYNVIQKLLPDEYGLPPLRGGGSVSHSAMELALLMGCEPVIFIGQDLAIKEDGTTHASNTIYSVEKDESGESL
MEVEGIDGTNVETPVRFYSFLRWFEKRLAMLPEKKLIIDATEGGAKIKGTKVMDFKDALDKYCNTRADIYSKLDELHRQF
CSRKKEVLIKHFKENISNLNCLKKLAEEGLEMIPDEDKILFNIKEVELQDLFLQLEDIESRIKKGQSVNQLSEVIAFSEV
SRILNNEEIDETIINGGHEEKVAAILNQSRELFSALINIYSTMEDYLEDLLDLLNESK

Specific function: Unknown

COG id: COG2604

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 71034; Mature: 71034

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKNLFNKNMQAMAKYNISLYQKLCNFNPDSDKFLLDKARNGSPTLKIKEGKTTRLVHSR
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCEEEEECCCCEEHHHHC
YNPEREADKWVKKINFKGRKKIFFLGLGLGYHLRFLLERKKGIDYIIVIEPELSTLYWSF
CCCCHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEE
HIYDYSNYIRENKLIFVYSKGENENYIRQVLASIDMLNMKTFFSVTTPLTGIYHKDVFAK
EEEEHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LNSFIKDHLISCIINFNTTVTFKYNWLNNFKHNMTYLFQHPGIDVLKNKFVKFPAIIVSA
HHHHHHHHHHHHEEECCEEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHCCEEEEEC
GPSLDKNIHLLKQAKDKAVIIGVGTSLKAIQNTGVRPDIVVSVDPAEANWKHFQSTDYDD
CCCCCCCHHHHHHCCCCEEEEEECCCHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCC
VYLVGDILSYYKILDQHNGKKFFFSTSAYNVIQKLLPDEYGLPPLRGGGSVSHSAMELAL
EEHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
LMGCEPVIFIGQDLAIKEDGTTHASNTIYSVEKDESGESLMEVEGIDGTNVETPVRFYSF
HHCCCCEEEECCCEEEECCCCCCCCCCEEEECCCCCCCCEEEEECCCCCCCCCHHHHHHH
LRWFEKRLAMLPEKKLIIDATEGGAKIKGTKVMDFKDALDKYCNTRADIYSKLDELHRQF
HHHHHHHHHHCCCCEEEEEECCCCCEECCCEEECHHHHHHHHHCCHHHHHHHHHHHHHHH
CSRKKEVLIKHFKENISNLNCLKKLAEEGLEMIPDEDKILFNIKEVELQDLFLQLEDIES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHH
RIKKGQSVNQLSEVIAFSEVSRILNNEEIDETIINGGHEEKVAAILNQSRELFSALINIY
HHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
STMEDYLEDLLDLLNESK
HHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDKNLFNKNMQAMAKYNISLYQKLCNFNPDSDKFLLDKARNGSPTLKIKEGKTTRLVHSR
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCEEEEECCCCEEHHHHC
YNPEREADKWVKKINFKGRKKIFFLGLGLGYHLRFLLERKKGIDYIIVIEPELSTLYWSF
CCCCHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEE
HIYDYSNYIRENKLIFVYSKGENENYIRQVLASIDMLNMKTFFSVTTPLTGIYHKDVFAK
EEEEHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LNSFIKDHLISCIINFNTTVTFKYNWLNNFKHNMTYLFQHPGIDVLKNKFVKFPAIIVSA
HHHHHHHHHHHHEEECCEEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHCCEEEEEC
GPSLDKNIHLLKQAKDKAVIIGVGTSLKAIQNTGVRPDIVVSVDPAEANWKHFQSTDYDD
CCCCCCCHHHHHHCCCCEEEEEECCCHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCC
VYLVGDILSYYKILDQHNGKKFFFSTSAYNVIQKLLPDEYGLPPLRGGGSVSHSAMELAL
EEHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
LMGCEPVIFIGQDLAIKEDGTTHASNTIYSVEKDESGESLMEVEGIDGTNVETPVRFYSF
HHCCCCEEEECCCEEEECCCCCCCCCCEEEECCCCCCCCEEEEECCCCCCCCCHHHHHHH
LRWFEKRLAMLPEKKLIIDATEGGAKIKGTKVMDFKDALDKYCNTRADIYSKLDELHRQF
HHHHHHHHHHCCCCEEEEEECCCCCEECCCEEECHHHHHHHHHCCHHHHHHHHHHHHHHH
CSRKKEVLIKHFKENISNLNCLKKLAEEGLEMIPDEDKILFNIKEVELQDLFLQLEDIES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHH
RIKKGQSVNQLSEVIAFSEVSRILNNEEIDETIINGGHEEKVAAILNQSRELFSALINIY
HHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
STMEDYLEDLLDLLNESK
HHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA