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The map label for this gene is fliS [H]

Identifier: 220932539

GI number: 220932539

Start: 1821556

End: 1821978

Strand: Reverse

Name: fliS [H]

Synonym: Hore_17030

Alternate gene names: 220932539

Gene position: 1821978-1821556 (Counterclockwise)

Preceding gene: 220932540

Following gene: 220932538

Centisome position: 70.67

GC content: 33.33

Gene sequence:

>423_bases
ATGCCAGAAAATCCTTACCAGAAATATAAAAAAACCAGGTTTGAAACTGCAAACAGGGAAAAATTGATTTTAATGCTTTA
TGAAGGGGCAATTAAAAGTCTTAATCATGCTAAAAAGGGTATGGAAGAAGATAATATTGAACTTATTAATGAATCCCTGA
AAAAATCTCAGGATATAATTAATGAATTAATGGTAAGTCTAAATCCAGAAGCAGGAGAGATTGCAACAAATCTATACAGC
CTGTACGATTATATGCAAAGACGTCTAATTGAAGCTAATCTAAAAAAGGAAATTGAGCCTGTAAAAGAGGTTAAAAAAAT
GGTTGAGGAACTTCATGAAACGTGGAAAGAGGCTATGTTACAGGTACATAAGACTAAGTATGCCGGTCAGAAAAAGCAGG
GAGGATTTTCTCTTGAAGGATAA

Upstream 100 bases:

>100_bases
GAATTGTTCTCTGCTTTAATTAATATATACAGTACAATGGAAGATTATCTTGAAGATTTATTAGATTTGTTAAATGAAAG
TAAATAAGGGGTGAGTTTTT

Downstream 100 bases:

>100_bases
CTCCTATGATGCATGTAAAGTTGTTAAAGAAAATTTTAAGCTTTTGGAAAAAAAGTATAATTTGTTTTACGATTTAAGCC
TGAAATTAAAACAAATTATT

Product: flagellar protein FliS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MPENPYQKYKKTRFETANREKLILMLYEGAIKSLNHAKKGMEEDNIELINESLKKSQDIINELMVSLNPEAGEIATNLYS
LYDYMQRRLIEANLKKEIEPVKEVKKMVEELHETWKEAMLQVHKTKYAGQKKQGGFSLEG

Sequences:

>Translated_140_residues
MPENPYQKYKKTRFETANREKLILMLYEGAIKSLNHAKKGMEEDNIELINESLKKSQDIINELMVSLNPEAGEIATNLYS
LYDYMQRRLIEANLKKEIEPVKEVKKMVEELHETWKEAMLQVHKTKYAGQKKQGGFSLEG
>Mature_139_residues
PENPYQKYKKTRFETANREKLILMLYEGAIKSLNHAKKGMEEDNIELINESLKKSQDIINELMVSLNPEAGEIATNLYSL
YDYMQRRLIEANLKKEIEPVKEVKKMVEELHETWKEAMLQVHKTKYAGQKKQGGFSLEG

Specific function: Not Known. [C]

COG id: COG1516

COG function: function code NUO; Flagellin-specific chaperone FliS

Gene ontology:

Cell location: Cytoplasm, cytosol (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliS family [H]

Homologues:

Organism=Escherichia coli, GI1788234, Length=120, Percent_Identity=35.8333333333333, Blast_Score=77, Evalue=4e-16,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003713 [H]

Pfam domain/function: PF02561 FliS [H]

EC number: NA

Molecular weight: Translated: 16350; Mature: 16219

Theoretical pI: Translated: 7.74; Mature: 7.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPENPYQKYKKTRFETANREKLILMLYEGAIKSLNHAKKGMEEDNIELINESLKKSQDII
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
NELMVSLNPEAGEIATNLYSLYDYMQRRLIEANLKKEIEPVKEVKKMVEELHETWKEAML
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVHKTKYAGQKKQGGFSLEG
HHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
PENPYQKYKKTRFETANREKLILMLYEGAIKSLNHAKKGMEEDNIELINESLKKSQDII
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
NELMVSLNPEAGEIATNLYSLYDYMQRRLIEANLKKEIEPVKEVKKMVEELHETWKEAML
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVHKTKYAGQKKQGGFSLEG
HHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8195064; 9384377 [H]