| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932537
Identifier: 220932537
GI number: 220932537
Start: 1820163
End: 1821095
Strand: Reverse
Name: 220932537
Synonym: Hore_17010
Alternate gene names: NA
Gene position: 1821095-1820163 (Counterclockwise)
Preceding gene: 220932538
Following gene: 220932536
Centisome position: 70.64
GC content: 28.83
Gene sequence:
>933_bases TTGCCACAAAAATTATTGATTACGGGCCGGACTAGAAGTGGGACAACGTTTTTAACAAATTTTTTGAACGCTCAAGAGGA AATAACCTTGTTTAGTGATATTTTTCATGTAGTAGCAGGCAAGTTTTTATCTCAACCAGTTCAAACTAAAGTGATAAATT ACCATAAAAAGTTGACAAGTAAAGAAAAAGATATATATTTACATTATATAAAAGTTGGTCTAGAGATGCTCGGGGACAAA ACAAATTATAAGTTACAAGTTAAACCAGAAGAATTTACAACAGCCAAAGAATTATATGAACTTTTATTAGATTCTATACA TAAACCAGGGGATAAGGTAGTTGGACATAAGGTTACTGAGGTTGAAATCAATGTAGAAAATATATTGAGCAATACTGATA TGAAAGTTTTATATATCATCAGGGACCCGCGAGATGCAGTATTATCTGCTGTTAAAAAGTTTGGTAATTCTGTATTTCAT GCAGTAACCAGTTGGAAAAAGGCTATAGATAAAATATTAAAAATAAATTCTAATAAATTGCTAGTTATCAGATTTGAGGA TTTAATAAAAAAGGATTTGTATTTAAAAAGTAAACTTGAGGGATTTCTTGGAATTAACATAGACTATAATATTAATGAAG CTAAGTCGCATGAAAACAAGAGTTTTATTGGGAACTCTTCTTTTTCTGATGTTGATAAACTTTTTGATTTAAGAGCTGTT GAAAGATGGAAGAATAGAAGTGAATTTATAGTCAAATATATTTATATGGAAACCCTGGATTATATTCAAAAGTTAGGGTA TGATTATATGGAATTAGATAAAAATGATTTTTCTATAAAACAAGAGGTAGACAAAATGAAACAAGAACATGAAAATTTAG TGCAACGATTAGGTAAAAACAAGCAACAGATAAATAAATTGTTGTTTTCCTAG
Upstream 100 bases:
>100_bases AATTAAAAGTGGTTACGAAAAAAATCAAGTAAAATTACATCGTAGGATTATTGATAAAAAATATTAATATATTATTTAGT TGCAAATAGGGGGAATTAGA
Downstream 100 bases:
>100_bases AATTCAAGAGGTGGTATATTAATGAAACCCTATATCATCGGTGAGACAGCTTATAATCATCAAGGTGACATCCATTATTT AAAAAGAATGATTGATGACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MPQKLLITGRTRSGTTFLTNFLNAQEEITLFSDIFHVVAGKFLSQPVQTKVINYHKKLTSKEKDIYLHYIKVGLEMLGDK TNYKLQVKPEEFTTAKELYELLLDSIHKPGDKVVGHKVTEVEINVENILSNTDMKVLYIIRDPRDAVLSAVKKFGNSVFH AVTSWKKAIDKILKINSNKLLVIRFEDLIKKDLYLKSKLEGFLGINIDYNINEAKSHENKSFIGNSSFSDVDKLFDLRAV ERWKNRSEFIVKYIYMETLDYIQKLGYDYMELDKNDFSIKQEVDKMKQEHENLVQRLGKNKQQINKLLFS
Sequences:
>Translated_310_residues MPQKLLITGRTRSGTTFLTNFLNAQEEITLFSDIFHVVAGKFLSQPVQTKVINYHKKLTSKEKDIYLHYIKVGLEMLGDK TNYKLQVKPEEFTTAKELYELLLDSIHKPGDKVVGHKVTEVEINVENILSNTDMKVLYIIRDPRDAVLSAVKKFGNSVFH AVTSWKKAIDKILKINSNKLLVIRFEDLIKKDLYLKSKLEGFLGINIDYNINEAKSHENKSFIGNSSFSDVDKLFDLRAV ERWKNRSEFIVKYIYMETLDYIQKLGYDYMELDKNDFSIKQEVDKMKQEHENLVQRLGKNKQQINKLLFS >Mature_309_residues PQKLLITGRTRSGTTFLTNFLNAQEEITLFSDIFHVVAGKFLSQPVQTKVINYHKKLTSKEKDIYLHYIKVGLEMLGDKT NYKLQVKPEEFTTAKELYELLLDSIHKPGDKVVGHKVTEVEINVENILSNTDMKVLYIIRDPRDAVLSAVKKFGNSVFHA VTSWKKAIDKILKINSNKLLVIRFEDLIKKDLYLKSKLEGFLGINIDYNINEAKSHENKSFIGNSSFSDVDKLFDLRAVE RWKNRSEFIVKYIYMETLDYIQKLGYDYMELDKNDFSIKQEVDKMKQEHENLVQRLGKNKQQINKLLFS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36126; Mature: 35995
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQKLLITGRTRSGTTFLTNFLNAQEEITLFSDIFHVVAGKFLSQPVQTKVINYHKKLTS CCCCEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC KEKDIYLHYIKVGLEMLGDKTNYKLQVKPEEFTTAKELYELLLDSIHKPGDKVVGHKVTE CCCHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHCCEEEE VEINVENILSNTDMKVLYIIRDPRDAVLSAVKKFGNSVFHAVTSWKKAIDKILKINSNKL EEEEHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE LVIRFEDLIKKDLYLKSKLEGFLGINIDYNINEAKSHENKSFIGNSSFSDVDKLFDLRAV EEEEHHHHHHHHHHHHHHCCHHEEEEEECCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHH ERWKNRSEFIVKYIYMETLDYIQKLGYDYMELDKNDFSIKQEVDKMKQEHENLVQRLGKN HHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC KQQINKLLFS HHHHHHHHCC >Mature Secondary Structure PQKLLITGRTRSGTTFLTNFLNAQEEITLFSDIFHVVAGKFLSQPVQTKVINYHKKLTS CCCEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC KEKDIYLHYIKVGLEMLGDKTNYKLQVKPEEFTTAKELYELLLDSIHKPGDKVVGHKVTE CCCHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHCCEEEE VEINVENILSNTDMKVLYIIRDPRDAVLSAVKKFGNSVFHAVTSWKKAIDKILKINSNKL EEEEHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE LVIRFEDLIKKDLYLKSKLEGFLGINIDYNINEAKSHENKSFIGNSSFSDVDKLFDLRAV EEEEHHHHHHHHHHHHHHCCHHEEEEEECCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHH ERWKNRSEFIVKYIYMETLDYIQKLGYDYMELDKNDFSIKQEVDKMKQEHENLVQRLGKN HHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC KQQINKLLFS HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA