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The map label for this gene is epsN [H]

Identifier: 220932533

GI number: 220932533

Start: 1815644

End: 1816819

Strand: Reverse

Name: epsN [H]

Synonym: Hore_16970

Alternate gene names: 220932533

Gene position: 1816819-1815644 (Counterclockwise)

Preceding gene: 220932534

Following gene: 220932532

Centisome position: 70.47

GC content: 34.86

Gene sequence:

>1176_bases
ATGGAAGACAAACTAAATATTCCGTTATCAGTACCTAATCTATCTTTAGATATACTTGATAACTTAAAAGAGTGTATTGA
AACGGGGTGGGTTTCAACGGGGGGAAGATTTATAAAAGAATTTGAGGATAAAGTGGCTAAATATGTAAGAGTTGAAGAAG
CCGTTGGAGTGCAGAGTGGCACGGGAGCTCTTCATCTCGGTTATCAATTGTTAGGGGTTAAACCCGGGGACGAAGTAATC
GTTCCTACCGTGACCTTCATTGCTACAGTTAACCCCATAACTTATCTGGGAGCCCATCCTGTATTTATGGACTGTGACGA
TACTTTAAATATGGACCTGGATAAACTTGAAGAATTTCTTGATAGTCACTGTGAAATAACTGATAAGGGTTTATTAAATA
AAAAAAGCAAGAGAATTATAAAAGTGTTAACTGTCACTCATATTTTTGGTAACCCCATTGATATGGAACGGGTTATGAAA
ATAGCTGGTAGATACAGGTTAAAAGTATTGGAAGATGCCGCTGAATCTTTAGGTTCATTTTATATCAGTGGTAAATATAA
AGGGAAACATACGGGAACAATCGGGGATTTAGGAGTGTTTTCATTTAATGCTAACAAGATACTAACGACTGGTGGAGGGG
GAATGATTGTTGCTAAGGATAAAAAATTAGTGAATAAAGCTCGCTTTTTATCTACTCAGGCCAAAACAGACCCCCTTTAT
TTTAAACATGATGAGATAGGTTACAACTATCGCCTTACCAATATAGCTGCTGCTTTGGGGACAAGTCAAATTGACAAAAT
TGAGGATTTTGTTAAAATAAAAAAAGAAAATTATCATCTATATAAAAAAGAGATTAACAATATTGAAGGGTTAGAGCTTT
TGCCCTTTAACGAGGGAACGAGGCCCAATTATTGGTTTTATTCCTTAATTGTCAATTCTGAAAAATATGGACTTAATAGA
GATGAACTATTACATAAACTTAATAGTGTTGGGATACAAACAAGACCTCTCTGGGGGCTTGTCAGTAAGCAAAAACCCTA
TAAAAACTACTTCGCCTATAAAATAGAAAAGGCTAGATATTATGTTAATAATTTGATTAACATACCCTGTAGTACTAATT
TGAAAAAAGAGCAGGTCTTGCAGGTTATAGACAAATTAAAAGGCTTTAAGAAATAA

Upstream 100 bases:

>100_bases
AAACGATATTTGATGTCTTTTGACAGAAAAAAACTGGTAAAAAAGCTTAAAGAATTGGTACCTACTTATAAAGACAATAG
TTATAGTGAGGAGAATATAG

Downstream 100 bases:

>100_bases
GGCGGTTTAGAATGAAAAACATAATAATTATTGGTGCTGGTGGTCATGGAAAAGTTGTGGCTGATATAATATTACAAAGA
CGAAAAGATTTAGGAGAAGA

Product: DegT/DnrJ/EryC1/StrS aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MEDKLNIPLSVPNLSLDILDNLKECIETGWVSTGGRFIKEFEDKVAKYVRVEEAVGVQSGTGALHLGYQLLGVKPGDEVI
VPTVTFIATVNPITYLGAHPVFMDCDDTLNMDLDKLEEFLDSHCEITDKGLLNKKSKRIIKVLTVTHIFGNPIDMERVMK
IAGRYRLKVLEDAAESLGSFYISGKYKGKHTGTIGDLGVFSFNANKILTTGGGGMIVAKDKKLVNKARFLSTQAKTDPLY
FKHDEIGYNYRLTNIAAALGTSQIDKIEDFVKIKKENYHLYKKEINNIEGLELLPFNEGTRPNYWFYSLIVNSEKYGLNR
DELLHKLNSVGIQTRPLWGLVSKQKPYKNYFAYKIEKARYYVNNLINIPCSTNLKKEQVLQVIDKLKGFKK

Sequences:

>Translated_391_residues
MEDKLNIPLSVPNLSLDILDNLKECIETGWVSTGGRFIKEFEDKVAKYVRVEEAVGVQSGTGALHLGYQLLGVKPGDEVI
VPTVTFIATVNPITYLGAHPVFMDCDDTLNMDLDKLEEFLDSHCEITDKGLLNKKSKRIIKVLTVTHIFGNPIDMERVMK
IAGRYRLKVLEDAAESLGSFYISGKYKGKHTGTIGDLGVFSFNANKILTTGGGGMIVAKDKKLVNKARFLSTQAKTDPLY
FKHDEIGYNYRLTNIAAALGTSQIDKIEDFVKIKKENYHLYKKEINNIEGLELLPFNEGTRPNYWFYSLIVNSEKYGLNR
DELLHKLNSVGIQTRPLWGLVSKQKPYKNYFAYKIEKARYYVNNLINIPCSTNLKKEQVLQVIDKLKGFKK
>Mature_391_residues
MEDKLNIPLSVPNLSLDILDNLKECIETGWVSTGGRFIKEFEDKVAKYVRVEEAVGVQSGTGALHLGYQLLGVKPGDEVI
VPTVTFIATVNPITYLGAHPVFMDCDDTLNMDLDKLEEFLDSHCEITDKGLLNKKSKRIIKVLTVTHIFGNPIDMERVMK
IAGRYRLKVLEDAAESLGSFYISGKYKGKHTGTIGDLGVFSFNANKILTTGGGGMIVAKDKKLVNKARFLSTQAKTDPLY
FKHDEIGYNYRLTNIAAALGTSQIDKIEDFVKIKKENYHLYKKEINNIEGLELLPFNEGTRPNYWFYSLIVNSEKYGLNR
DELLHKLNSVGIQTRPLWGLVSKQKPYKNYFAYKIEKARYYVNNLINIPCSTNLKKEQVLQVIDKLKGFKK

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=401, Percent_Identity=28.428927680798, Blast_Score=151, Evalue=6e-38,
Organism=Escherichia coli, GI2367285, Length=285, Percent_Identity=28.4210526315789, Blast_Score=117, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR002129
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 44234; Mature: 44234

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDKLNIPLSVPNLSLDILDNLKECIETGWVSTGGRFIKEFEDKVAKYVRVEEAVGVQSG
CCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
TGALHLGYQLLGVKPGDEVIVPTVTFIATVNPITYLGAHPVFMDCDDTLNMDLDKLEEFL
CCEEEECEEEEECCCCCCEEECEEEEEEECCCHHCCCCCCEEECCCCCCCCCHHHHHHHH
DSHCEITDKGLLNKKSKRIIKVLTVTHIFGNPIDMERVMKIAGRYRLKVLEDAAESLGSF
HCCCCCCCCHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCE
YISGKYKGKHTGTIGDLGVFSFNANKILTTGGGGMIVAKDKKLVNKARFLSTQAKTDPLY
EEEEEECCCCCCCCCCCEEEEECCCEEEEECCCEEEEECCHHHHHHHHHHHCCCCCCCEE
FKHDEIGYNYRLTNIAAALGTSQIDKIEDFVKIKKENYHLYKKEINNIEGLELLPFNEGT
EEECCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEHHHCCCCCCEEEEECCCCC
RPNYWFYSLIVNSEKYGLNRDELLHKLNSVGIQTRPLWGLVSKQKPYKNYFAYKIEKARY
CCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCHHHEEEHHHHH
YVNNLINIPCSTNLKKEQVLQVIDKLKGFKK
HHHHHEECCCCCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEDKLNIPLSVPNLSLDILDNLKECIETGWVSTGGRFIKEFEDKVAKYVRVEEAVGVQSG
CCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
TGALHLGYQLLGVKPGDEVIVPTVTFIATVNPITYLGAHPVFMDCDDTLNMDLDKLEEFL
CCEEEECEEEEECCCCCCEEECEEEEEEECCCHHCCCCCCEEECCCCCCCCCHHHHHHHH
DSHCEITDKGLLNKKSKRIIKVLTVTHIFGNPIDMERVMKIAGRYRLKVLEDAAESLGSF
HCCCCCCCCHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCE
YISGKYKGKHTGTIGDLGVFSFNANKILTTGGGGMIVAKDKKLVNKARFLSTQAKTDPLY
EEEEEECCCCCCCCCCCEEEEECCCEEEEECCCEEEEECCHHHHHHHHHHHCCCCCCCEE
FKHDEIGYNYRLTNIAAALGTSQIDKIEDFVKIKKENYHLYKKEINNIEGLELLPFNEGT
EEECCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEHHHCCCCCCEEEEECCCCC
RPNYWFYSLIVNSEKYGLNRDELLHKLNSVGIQTRPLWGLVSKQKPYKNYFAYKIEKARY
CCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCHHHEEEHHHHH
YVNNLINIPCSTNLKKEQVLQVIDKLKGFKK
HHHHHEECCCCCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]