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The map label for this gene is ytxE [H]

Identifier: 220932514

GI number: 220932514

Start: 1798889

End: 1799626

Strand: Reverse

Name: ytxE [H]

Synonym: Hore_16770

Alternate gene names: 220932514

Gene position: 1799626-1798889 (Counterclockwise)

Preceding gene: 220932515

Following gene: 220932513

Centisome position: 69.8

GC content: 40.38

Gene sequence:

>738_bases
ATGCCTAAACTCAAAAAAGACCTGGAAGAGGAAAATAAGAATACTTCCCCGGGATGGATGGTTACATACGGGGATATGAT
GACCTTACTGTTAGTTTTCTTTGTTTTCCTGTATTCTTTTTCAGTGATGAATGTGGAAAAATTTGAGGGATTTATTTCTG
CCCTTCAGGCTAAACTTGGTGTAATGCCTGGTGGTAAGACGATAATGGACGAGGAATTGTTATCAAGGGGTTCAATTGGA
AACAGGTTCAATCCATCAAATCAGGTTTTTGAGAAGGTAATGGGCCAGATAAACCGGTATGTTGAAAAGGAAAAGTTATC
AGACAGGGTTAAAATGGAACTTACCAAACGTGGGCTGGTGGTAAGATTAACCGGACAGGTCCTTTATGATATCGGGAAGG
CAGAAATTAAGCCAGGAGGAAAAAGGCTTCTGGACGAAATTGCCGGTATCATAGAAAAAATTCCAAATGAAATAGCTGTC
GAAGGCCACACCGATAACTGGCCAATACATAATGAACAATTTCCGTCCAACTGGGAATTATCAACTACCAGAGCCACCAA
TGTTATCAAATACTTTATAGAAAGACACGGTATTGATCCATCCCGTTTATCTGCAGCAGGGTATTCTGAATACCGACCCC
TTTATCCCAATGATACAGTTGAACACCGGGCCAAAAATAGAAGGGTTGAAATAGTAATTCTCAATACACTACACAATAAG
GCAATGGAAAGGAGGTAG

Upstream 100 bases:

>100_bases
CCGAGGATAGTAAGAGAAAAGTTAAATGCCTTCCTGGCTACTGAAAGAGAAAGGATTGCTTCGGAGGCACCCAGGTTCGA
AGAGATGGCGGTGGGTGAAA

Downstream 100 bases:

>100_bases
TTTGTAATGGCTGATAAAGGTGGAGGAGTAAAATCTTTCATTGGTATAGTAATTATGATGGTTTTAATTGCAGCCGGGAC
AAGTTATGGCTTTATGACCT

Product: OmpA/MotB domain-containing protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MPKLKKDLEEENKNTSPGWMVTYGDMMTLLLVFFVFLYSFSVMNVEKFEGFISALQAKLGVMPGGKTIMDEELLSRGSIG
NRFNPSNQVFEKVMGQINRYVEKEKLSDRVKMELTKRGLVVRLTGQVLYDIGKAEIKPGGKRLLDEIAGIIEKIPNEIAV
EGHTDNWPIHNEQFPSNWELSTTRATNVIKYFIERHGIDPSRLSAAGYSEYRPLYPNDTVEHRAKNRRVEIVILNTLHNK
AMERR

Sequences:

>Translated_245_residues
MPKLKKDLEEENKNTSPGWMVTYGDMMTLLLVFFVFLYSFSVMNVEKFEGFISALQAKLGVMPGGKTIMDEELLSRGSIG
NRFNPSNQVFEKVMGQINRYVEKEKLSDRVKMELTKRGLVVRLTGQVLYDIGKAEIKPGGKRLLDEIAGIIEKIPNEIAV
EGHTDNWPIHNEQFPSNWELSTTRATNVIKYFIERHGIDPSRLSAAGYSEYRPLYPNDTVEHRAKNRRVEIVILNTLHNK
AMERR
>Mature_244_residues
PKLKKDLEEENKNTSPGWMVTYGDMMTLLLVFFVFLYSFSVMNVEKFEGFISALQAKLGVMPGGKTIMDEELLSRGSIGN
RFNPSNQVFEKVMGQINRYVEKEKLSDRVKMELTKRGLVVRLTGQVLYDIGKAEIKPGGKRLLDEIAGIIEKIPNEIAVE
GHTDNWPIHNEQFPSNWELSTTRATNVIKYFIERHGIDPSRLSAAGYSEYRPLYPNDTVEHRAKNRRVEIVILNTLHNKA
MERR

Specific function: May be involved in some transport function [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1788198, Length=257, Percent_Identity=25.2918287937743, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI48994946, Length=139, Percent_Identity=30.9352517985612, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 28107; Mature: 27976

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKLKKDLEEENKNTSPGWMVTYGDMMTLLLVFFVFLYSFSVMNVEKFEGFISALQAKLG
CCCHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
VMPGGKTIMDEELLSRGSIGNRFNPSNQVFEKVMGQINRYVEKEKLSDRVKMELTKRGLV
CCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
VRLTGQVLYDIGKAEIKPGGKRLLDEIAGIIEKIPNEIAVEGHTDNWPIHNEQFPSNWEL
EEEHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHCCHHEEECCCCCCCCCCCCCCCCCCCC
STTRATNVIKYFIERHGIDPSRLSAAGYSEYRPLYPNDTVEHRAKNRRVEIVILNTLHNK
CHHHHHHHHHHHHHHHCCCHHHHHHCCHHHCCCCCCCCHHHHHHHCCEEEEEEEEHHHHH
AMERR
HHCCC
>Mature Secondary Structure 
PKLKKDLEEENKNTSPGWMVTYGDMMTLLLVFFVFLYSFSVMNVEKFEGFISALQAKLG
CCHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
VMPGGKTIMDEELLSRGSIGNRFNPSNQVFEKVMGQINRYVEKEKLSDRVKMELTKRGLV
CCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
VRLTGQVLYDIGKAEIKPGGKRLLDEIAGIIEKIPNEIAVEGHTDNWPIHNEQFPSNWEL
EEEHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHCCHHEEECCCCCCCCCCCCCCCCCCCC
STTRATNVIKYFIERHGIDPSRLSAAGYSEYRPLYPNDTVEHRAKNRRVEIVILNTLHNK
CHHHHHHHHHHHHHHHCCCHHHHHHCCHHHCCCCCCCCHHHHHHHCCEEEEEEEEHHHHH
AMERR
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8200532 [H]