| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932513
Identifier: 220932513
GI number: 220932513
Start: 1798445
End: 1798882
Strand: Reverse
Name: 220932513
Synonym: Hore_16760
Alternate gene names: NA
Gene position: 1798882-1798445 (Counterclockwise)
Preceding gene: 220932514
Following gene: 220932512
Centisome position: 69.77
GC content: 41.1
Gene sequence:
>438_bases ATGGCTGATAAAGGTGGAGGAGTAAAATCTTTCATTGGTATAGTAATTATGATGGTTTTAATTGCAGCCGGGACAAGTTA TGGCTTTATGACCTACTTTGACCGGACCAATTCCCAGCATGTTCTTGAAAGCAAGGATATTGGCCCTACCTATTCACTGG GAGATTTTATCGTCAATCTCTCCGGTACAGGTGGATACCAGTACATAAAAGCAAGTATTGTAGTTGAAGTTAGTCAGGAC AGTGTAATTCGTGAACTGGATAAAAGGAGTCCCCAGATAAGGGATATTATTATTTCAATTTTAAGGGACCAGAAAATGGC CGATATAGAGGAACCGGGGGCCAGAACCATAAAAAATAGAGTCAGGGCTGAGTTAAATCAGGTTTTAACTACCGGGAAAA TCACCAGTGTTTGGTTTACTCAGCTGGTGGTTCAGTAG
Upstream 100 bases:
>100_bases TCCCAATGATACAGTTGAACACCGGGCCAAAAATAGAAGGGTTGAAATAGTAATTCTCAATACACTACACAATAAGGCAA TGGAAAGGAGGTAGTTTGTA
Downstream 100 bases:
>100_bases GAGGTTAATCATATGGCTGATGTATTGAGTCAGAGTGAAATAGATTCGTTACTATCTGCCCTGTCATCCGGTGATGTGGA TGTCGAGGAGATAAAAAAAG
Product: flagellar basal body-associated protein FliL
Products: NA
Alternate protein names: Flagellar Protein FliL; Flagellar Basal Body-Associated Protein; Flagellar Protein; Flagellar Basal Body-Associated Protein Flil; Flagellar FliL Protein; Flagellar Basal Body-Protein FliL
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MADKGGGVKSFIGIVIMMVLIAAGTSYGFMTYFDRTNSQHVLESKDIGPTYSLGDFIVNLSGTGGYQYIKASIVVEVSQD SVIRELDKRSPQIRDIIISILRDQKMADIEEPGARTIKNRVRAELNQVLTTGKITSVWFTQLVVQ
Sequences:
>Translated_145_residues MADKGGGVKSFIGIVIMMVLIAAGTSYGFMTYFDRTNSQHVLESKDIGPTYSLGDFIVNLSGTGGYQYIKASIVVEVSQD SVIRELDKRSPQIRDIIISILRDQKMADIEEPGARTIKNRVRAELNQVLTTGKITSVWFTQLVVQ >Mature_144_residues ADKGGGVKSFIGIVIMMVLIAAGTSYGFMTYFDRTNSQHVLESKDIGPTYSLGDFIVNLSGTGGYQYIKASIVVEVSQDS VIRELDKRSPQIRDIIISILRDQKMADIEEPGARTIKNRVRAELNQVLTTGKITSVWFTQLVVQ
Specific function: Unknown
COG id: COG1580
COG function: function code N; Flagellar basal body-associated protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16033; Mature: 15902
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADKGGGVKSFIGIVIMMVLIAAGTSYGFMTYFDRTNSQHVLESKDIGPTYSLGDFIVNL CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHEEECCCCCCCCCCCCCCCCCCCCCCEEEEC SGTGGYQYIKASIVVEVSQDSVIRELDKRSPQIRDIIISILRDQKMADIEEPGARTIKNR CCCCCHHEEEEEEEEEECHHHHHHHHHHCCCHHHHHHHHHHHCCHHCCCCCCCHHHHHHH VRAELNQVLTTGKITSVWFTQLVVQ HHHHHHHHHHCCCHHHHHHHHHHCC >Mature Secondary Structure ADKGGGVKSFIGIVIMMVLIAAGTSYGFMTYFDRTNSQHVLESKDIGPTYSLGDFIVNL CCCCCCHHHHHHHHHHHHHHHCCCCCCHHEEECCCCCCCCCCCCCCCCCCCCCCEEEEC SGTGGYQYIKASIVVEVSQDSVIRELDKRSPQIRDIIISILRDQKMADIEEPGARTIKNR CCCCCHHEEEEEEEEEECHHHHHHHHHHCCCHHHHHHHHHHHCCHHCCCCCCCHHHHHHH VRAELNQVLTTGKITSVWFTQLVVQ HHHHHHHHHHCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA