| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932493
Identifier: 220932493
GI number: 220932493
Start: 1780849
End: 1781859
Strand: Reverse
Name: 220932493
Synonym: Hore_16560
Alternate gene names: NA
Gene position: 1781859-1780849 (Counterclockwise)
Preceding gene: 220932494
Following gene: 220932492
Centisome position: 69.11
GC content: 42.63
Gene sequence:
>1011_bases ATGGTAAAGCGTACCGGACAGAAGGGTGTTAAAATATCCAGATTAATTTTGCTGCTGCTGGTAACAGTTTTATTATTAGT GACTTTATCTGCTGATATCCTGGCCGGGGAGGAGATAATTTATAAGATAAGTAGGACTGAGGTCATTATTTCCTCTCCCC AAATTTACCTTGGTGATATAGGTAGCTTTACGGGTGTCAGTGGACAAAAACTAACTGAATTAAATAAAATTAGTCTGGGA CGGGCCCCCTTACCCGGCTATTTCCGGGAAATAACCCGGGAGTTAATATCCCTTATATTAAAGGAAAAGGGTTTTATCGA CATCAAGCTCATGGTCCCTGAAGTTGTTATTGTAAAAACCTCCAGTAGAGAAATAGAGGGGGAAAAGCTACTGGAGGAGG GGCGTCAATTTATATTAAATAAACTGGCCCCCCGGGCAGAAGGGGTGGCTATAACCCCTACTATTACCCCCCGGAATGTA GTAATACCGGATGGGGAATATAGTTTAAAATTTCTCGAGGAGGATCCGGATAAATTAATCGGAAATATCTCCCTTCCCAT TGAAATTATAGTTAATGGTAAGGTGTGGCGGCGTATCTATTTAGGTTATAAAGTTGAACTCAGGATGAAAGTCCTTGTAG CGACCCGGAATATAAAAAGAGGGAGCAATATCTGTAAAGAGGATTTGGCCCTGACAACTGAGAAGATAACTGGAGTCAGG GGAGAGATTATAAATGATTTTAATGACCCCCGGCTGTCATATTCCATTGTTAAGATCCCTTTACAGAAGGGAGAGATACT GACTACTGATCACCTGGAGCAACCAGTGGTCATACACTGGGGGGATATAGTAGAAGCAGAGGTTATTGTCAGGAATGTTA AGGTCTCTACCAGTGTTAAGGCCCTGGGTAGTGGCCGGGTGGGCGATTATGTAAAGGTTATAAACCCTGAAACCGGTTAT GAATTTAAAGCCAGGGTTATTAATTCGAGACTGGTCAGGGTCGTCCGCTAA
Upstream 100 bases:
>100_bases ATTTGGTTTACTGGTTGATTTAGTATTATACCCGGGTTTAAGATATACGGGCTTAAGATACCTGTGTTTAAATAACTCCA TGATAAAGTAGGGACCAATT
Downstream 100 bases:
>100_bases TTACAGGAGGTAATTCCTATGAAAAAAAGCTTGATTTTTATGGTCTGTCTTTTGTTACTGGTTAGTCCGCTAACTGGAGC TGATAACAATTCACTCTGGT
Product: Flagellar basal body P-ring biosynthesis protein
Products: NA
Alternate protein names: Flagellar Basal Body P-Ring Biosynthesis Protein
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MVKRTGQKGVKISRLILLLLVTVLLLVTLSADILAGEEIIYKISRTEVIISSPQIYLGDIGSFTGVSGQKLTELNKISLG RAPLPGYFREITRELISLILKEKGFIDIKLMVPEVVIVKTSSREIEGEKLLEEGRQFILNKLAPRAEGVAITPTITPRNV VIPDGEYSLKFLEEDPDKLIGNISLPIEIIVNGKVWRRIYLGYKVELRMKVLVATRNIKRGSNICKEDLALTTEKITGVR GEIINDFNDPRLSYSIVKIPLQKGEILTTDHLEQPVVIHWGDIVEAEVIVRNVKVSTSVKALGSGRVGDYVKVINPETGY EFKARVINSRLVRVVR
Sequences:
>Translated_336_residues MVKRTGQKGVKISRLILLLLVTVLLLVTLSADILAGEEIIYKISRTEVIISSPQIYLGDIGSFTGVSGQKLTELNKISLG RAPLPGYFREITRELISLILKEKGFIDIKLMVPEVVIVKTSSREIEGEKLLEEGRQFILNKLAPRAEGVAITPTITPRNV VIPDGEYSLKFLEEDPDKLIGNISLPIEIIVNGKVWRRIYLGYKVELRMKVLVATRNIKRGSNICKEDLALTTEKITGVR GEIINDFNDPRLSYSIVKIPLQKGEILTTDHLEQPVVIHWGDIVEAEVIVRNVKVSTSVKALGSGRVGDYVKVINPETGY EFKARVINSRLVRVVR >Mature_336_residues MVKRTGQKGVKISRLILLLLVTVLLLVTLSADILAGEEIIYKISRTEVIISSPQIYLGDIGSFTGVSGQKLTELNKISLG RAPLPGYFREITRELISLILKEKGFIDIKLMVPEVVIVKTSSREIEGEKLLEEGRQFILNKLAPRAEGVAITPTITPRNV VIPDGEYSLKFLEEDPDKLIGNISLPIEIIVNGKVWRRIYLGYKVELRMKVLVATRNIKRGSNICKEDLALTTEKITGVR GEIINDFNDPRLSYSIVKIPLQKGEILTTDHLEQPVVIHWGDIVEAEVIVRNVKVSTSVKALGSGRVGDYVKVINPETGY EFKARVINSRLVRVVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37516; Mature: 37516
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKRTGQKGVKISRLILLLLVTVLLLVTLSADILAGEEIIYKISRTEVIISSPQIYLGDI CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEECCEEEEECCCEEEECC GSFTGVSGQKLTELNKISLGRAPLPGYFREITRELISLILKEKGFIDIKLMVPEVVIVKT CCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEC SSREIEGEKLLEEGRQFILNKLAPRAEGVAITPTITPRNVVIPDGEYSLKFLEEDPDKLI CCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEECCCCCEEEEECCCHHHHH GNISLPIEIIVNGKVWRRIYLGYKVELRMKVLVATRNIKRGSNICKEDLALTTEKITGVR CCCCCEEEEEECCCEEEEEEEEEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCC GEIINDFNDPRLSYSIVKIPLQKGEILTTDHLEQPVVIHWGDIVEAEVIVRNVKVSTSVK HHHHCCCCCCCEEEEEEEEEECCCCEEECCCCCCCEEEEECCHHEEEHHEEEEEEECCHH ALGSGRVGDYVKVINPETGYEFKARVINSRLVRVVR CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MVKRTGQKGVKISRLILLLLVTVLLLVTLSADILAGEEIIYKISRTEVIISSPQIYLGDI CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEECCEEEEECCCEEEECC GSFTGVSGQKLTELNKISLGRAPLPGYFREITRELISLILKEKGFIDIKLMVPEVVIVKT CCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEC SSREIEGEKLLEEGRQFILNKLAPRAEGVAITPTITPRNVVIPDGEYSLKFLEEDPDKLI CCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEECCCCCEEEEECCCHHHHH GNISLPIEIIVNGKVWRRIYLGYKVELRMKVLVATRNIKRGSNICKEDLALTTEKITGVR CCCCCEEEEEECCCEEEEEEEEEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCC GEIINDFNDPRLSYSIVKIPLQKGEILTTDHLEQPVVIHWGDIVEAEVIVRNVKVSTSVK HHHHCCCCCCCEEEEEEEEEECCCCEEECCCCCCCEEEEECCHHEEEHHEEEEEEECCHH ALGSGRVGDYVKVINPETGYEFKARVINSRLVRVVR CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA