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The map label for this gene is flgH [H]

Identifier: 220932492

GI number: 220932492

Start: 1780252

End: 1780830

Strand: Reverse

Name: flgH [H]

Synonym: Hore_16550

Alternate gene names: 220932492

Gene position: 1780830-1780252 (Counterclockwise)

Preceding gene: 220932493

Following gene: 220932491

Centisome position: 69.07

GC content: 40.93

Gene sequence:

>579_bases
ATGAAAAAAAGCTTGATTTTTATGGTCTGTCTTTTGTTACTGGTTAGTCCGCTAACTGGAGCTGATAACAATTCACTCTG
GTCTGACGAATCGGCCAGTATCTATGAAGATCGTCAGGAATTTAAAGTCGGGGATGTTATTACAGTAGTCATTGAAGAGA
ATTCCAGTGCTGTCCAGAGTGCCAATACTTCCACCAGCCAGGAAAGCAATATTGATGCCGGGCCTGGACTGGGTATTTTT
GATTTTATTAAGGCCTTTGGTTTTAGTTATTCTGATGAGGGTCAGGCCGATGGTCAGACCCAGCGGAGTGGTATTATTGA
AGCAGACCTTACAACCCAGATTGTTGAGATTCTTCCCGGTGGTAATTTCAGGATTGTTGGCCGGAAAACAATTAAAATAA
ATGGTGAAGAACAGTATATAAAACTATCAGGTATTATCAGGCCTGAAGATGTTACCCTGGATAATACAGTCCTGTCGACT
AAAGTGGCTGAGGCTTCGATTGAATTTGAAGGGGAAGGAATTGTTACCGAAAAACAGAAACCGGGTTTGTTTGAAAGAAT
TATGAACTGGATTTTTTAG

Upstream 100 bases:

>100_bases
TGTAAAGGTTATAAACCCTGAAACCGGTTATGAATTTAAAGCCAGGGTTATTAATTCGAGACTGGTCAGGGTCGTCCGCT
AATTACAGGAGGTAATTCCT

Downstream 100 bases:

>100_bases
GAGAGAGGGGGTCAAGGTCAATGACCTTTGCATATAGATTGAGATATCTTTTTCAACATATCCTGTTTTTACTTATAATA
TTACTGGCAACCCTGCCTGC

Product: flagellar L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein [H]

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MKKSLIFMVCLLLLVSPLTGADNNSLWSDESASIYEDRQEFKVGDVITVVIEENSSAVQSANTSTSQESNIDAGPGLGIF
DFIKAFGFSYSDEGQADGQTQRSGIIEADLTTQIVEILPGGNFRIVGRKTIKINGEEQYIKLSGIIRPEDVTLDNTVLST
KVAEASIEFEGEGIVTEKQKPGLFERIMNWIF

Sequences:

>Translated_192_residues
MKKSLIFMVCLLLLVSPLTGADNNSLWSDESASIYEDRQEFKVGDVITVVIEENSSAVQSANTSTSQESNIDAGPGLGIF
DFIKAFGFSYSDEGQADGQTQRSGIIEADLTTQIVEILPGGNFRIVGRKTIKINGEEQYIKLSGIIRPEDVTLDNTVLST
KVAEASIEFEGEGIVTEKQKPGLFERIMNWIF
>Mature_192_residues
MKKSLIFMVCLLLLVSPLTGADNNSLWSDESASIYEDRQEFKVGDVITVVIEENSSAVQSANTSTSQESNIDAGPGLGIF
DFIKAFGFSYSDEGQADGQTQRSGIIEADLTTQIVEILPGGNFRIVGRKTIKINGEEQYIKLSGIIRPEDVTLDNTVLST
KVAEASIEFEGEGIVTEKQKPGLFERIMNWIF

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family [H]

Homologues:

Organism=Escherichia coli, GI1787319, Length=167, Percent_Identity=31.7365269461078, Blast_Score=82, Evalue=3e-17,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000527 [H]

Pfam domain/function: PF02107 FlgH [H]

EC number: NA

Molecular weight: Translated: 21034; Mature: 21034

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSLIFMVCLLLLVSPLTGADNNSLWSDESASIYEDRQEFKVGDVITVVIEENSSAVQS
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHH
ANTSTSQESNIDAGPGLGIFDFIKAFGFSYSDEGQADGQTQRSGIIEADLTTQIVEILPG
CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHCCCEEHHHHHHHHHHCCC
GNFRIVGRKTIKINGEEQYIKLSGIIRPEDVTLDNTVLSTKVAEASIEFEGEGIVTEKQK
CCEEEEEEEEEEECCCCEEEEEECEECCCCCEECCHHHHHHHHHEEEEECCCCEEECCCC
PGLFERIMNWIF
CCHHHHHHHHHC
>Mature Secondary Structure
MKKSLIFMVCLLLLVSPLTGADNNSLWSDESASIYEDRQEFKVGDVITVVIEENSSAVQS
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHH
ANTSTSQESNIDAGPGLGIFDFIKAFGFSYSDEGQADGQTQRSGIIEADLTTQIVEILPG
CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHCCCEEHHHHHHHHHHCCC
GNFRIVGRKTIKINGEEQYIKLSGIIRPEDVTLDNTVLSTKVAEASIEFEGEGIVTEKQK
CCEEEEEEEEEEECCCCEEEEEECEECCCCCEECCHHHHHHHHHEEEEECCCCEEECCCC
PGLFERIMNWIF
CCHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA