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The map label for this gene is ganQ [H]

Identifier: 220932453

GI number: 220932453

Start: 1733741

End: 1734583

Strand: Reverse

Name: ganQ [H]

Synonym: Hore_16170

Alternate gene names: 220932453

Gene position: 1734583-1733741 (Counterclockwise)

Preceding gene: 220932454

Following gene: 220932452

Centisome position: 67.28

GC content: 42.94

Gene sequence:

>843_bases
ATGATTGATTCTTATAAAACACGGAATACTATTAAATTGACATTTACATACCTGTTCATTGGGATAATGATTCTGATAGC
CTTATTTCCGGCCCTCTGGATTTTCAGTGGTTCTTTAAATCCGGGTCATAGCCTCTTTTCAACTAAATTTATTCCTGAAA
ATGCTACCTTTATTCACTATAAAGAGCTTTTCCAGGAAACAGATTTCGGTATCTGGTATATCAATACCCTGAAAGTTGGT
GCCGGAACTGCGATACTGGGTGTTTTCCTGGCTTCCCTTACCGCCTATGCCTTTTCACGGTTAAAGTTTGCCGGACGTAA
AGTTGGGATGATGGTCATGCTGATCATCCAGGTCTTTCCGGGTGTTATGTCCATGGTAGCCCTGTATGTTTTGCTTAATC
TAGTTGAATTACTGGATACCCATATCGGGTTGATTATAATATATGCCGCGGGTACGGTACCTTATCATTCATGGTTGATG
AAGGGTTATCTCGATACAATTCCCAAGTCCCTTGAAGAAGCAGCCATTATTGATGGTGCCAGTCACTGGAAAATCTTCTG
GACAATTATATTACCCCTGGCGATACCGATGTTATCTGTCCTGGCCCTTTTTTACTTTGTAGCTCCTTTCGGTGATTTCC
TCTTTGCCCGGCTGGTAATCACCAGTCCTGATAAATGGACTCTGGCTCTGGGCCTGTATGAATTTGTTGTTGACCAGTAT
GGAAAGAACTTTACAATCTTTGCAGCCGGTTCCCTGCTGGCAGCAATTCCCATCCTTATCCTGCATCTAAGCATGCAAAG
CATGCTGGTCAGTGGGTTAACCAGGGGAGCCAACAAAGGATAA

Upstream 100 bases:

>100_bases
ACGCTGCAGCCATTTCTCTGATTATATTTATTATTGTAGCTGGATTTGCTATCTATAACTTCCGGAGGACCCGGTCATAC
CAGGAGGAGGAGATGCTACA

Downstream 100 bases:

>100_bases
TATTTATTGTAATTCATCTAATCTCACGTTAAAGCTCAGTAAGAAGGAAAGCCCGGGAGTGATAGATAATTATTTGCTCT
GTCCAATTTACTACAAAATT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MIDSYKTRNTIKLTFTYLFIGIMILIALFPALWIFSGSLNPGHSLFSTKFIPENATFIHYKELFQETDFGIWYINTLKVG
AGTAILGVFLASLTAYAFSRLKFAGRKVGMMVMLIIQVFPGVMSMVALYVLLNLVELLDTHIGLIIIYAAGTVPYHSWLM
KGYLDTIPKSLEEAAIIDGASHWKIFWTIILPLAIPMLSVLALFYFVAPFGDFLFARLVITSPDKWTLALGLYEFVVDQY
GKNFTIFAAGSLLAAIPILILHLSMQSMLVSGLTRGANKG

Sequences:

>Translated_280_residues
MIDSYKTRNTIKLTFTYLFIGIMILIALFPALWIFSGSLNPGHSLFSTKFIPENATFIHYKELFQETDFGIWYINTLKVG
AGTAILGVFLASLTAYAFSRLKFAGRKVGMMVMLIIQVFPGVMSMVALYVLLNLVELLDTHIGLIIIYAAGTVPYHSWLM
KGYLDTIPKSLEEAAIIDGASHWKIFWTIILPLAIPMLSVLALFYFVAPFGDFLFARLVITSPDKWTLALGLYEFVVDQY
GKNFTIFAAGSLLAAIPILILHLSMQSMLVSGLTRGANKG
>Mature_280_residues
MIDSYKTRNTIKLTFTYLFIGIMILIALFPALWIFSGSLNPGHSLFSTKFIPENATFIHYKELFQETDFGIWYINTLKVG
AGTAILGVFLASLTAYAFSRLKFAGRKVGMMVMLIIQVFPGVMSMVALYVLLNLVELLDTHIGLIIIYAAGTVPYHSWLM
KGYLDTIPKSLEEAAIIDGASHWKIFWTIILPLAIPMLSVLALFYFVAPFGDFLFARLVITSPDKWTLALGLYEFVVDQY
GKNFTIFAAGSLLAAIPILILHLSMQSMLVSGLTRGANKG

Specific function: Could be part of a binding-protein-dependent transport system for arabinogalactan oligomers; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG3833

COG function: function code G; ABC-type maltose transport systems, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1790464, Length=292, Percent_Identity=35.958904109589, Blast_Score=150, Evalue=7e-38,
Organism=Escherichia coli, GI1787571, Length=271, Percent_Identity=30.9963099630996, Blast_Score=116, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31145; Mature: 31145

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDSYKTRNTIKLTFTYLFIGIMILIALFPALWIFSGSLNPGHSLFSTKFIPENATFIHY
CCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEECCCCCCCHHH
KELFQETDFGIWYINTLKVGAGTAILGVFLASLTAYAFSRLKFAGRKVGMMVMLIIQVFP
HHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVMSMVALYVLLNLVELLDTHIGLIIIYAAGTVPYHSWLMKGYLDTIPKSLEEAAIIDGA
HHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
SHWKIFWTIILPLAIPMLSVLALFYFVAPFGDFLFARLVITSPDKWTLALGLYEFVVDQY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC
GKNFTIFAAGSLLAAIPILILHLSMQSMLVSGLTRGANKG
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIDSYKTRNTIKLTFTYLFIGIMILIALFPALWIFSGSLNPGHSLFSTKFIPENATFIHY
CCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEECCCCCCCHHH
KELFQETDFGIWYINTLKVGAGTAILGVFLASLTAYAFSRLKFAGRKVGMMVMLIIQVFP
HHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVMSMVALYVLLNLVELLDTHIGLIIIYAAGTVPYHSWLMKGYLDTIPKSLEEAAIIDGA
HHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
SHWKIFWTIILPLAIPMLSVLALFYFVAPFGDFLFARLVITSPDKWTLALGLYEFVVDQY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC
GKNFTIFAAGSLLAAIPILILHLSMQSMLVSGLTRGANKG
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]