| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is pgk [H]
Identifier: 220932418
GI number: 220932418
Start: 1694168
End: 1695352
Strand: Reverse
Name: pgk [H]
Synonym: Hore_15820
Alternate gene names: 220932418
Gene position: 1695352-1694168 (Counterclockwise)
Preceding gene: 220932419
Following gene: 220932417
Centisome position: 65.76
GC content: 44.81
Gene sequence:
>1185_bases GTGAAAAAGACCCTGAAGGATGTTGATTTCAAGGGTAAAAGAACGCTGGTAAGAGTAGATTTCAATGTACCTCTTGAAGA TGGTAAGATTACCGATGATACCAGAATTGAGGCCGCATTACCTACTATAAAATACCTGGTTGATGAAGGGGCAAAGGTTA TATTAATGTCGCATCTGGGTCGTCCCAAAGGTAAGGTCGTAGATTCTTTAAGACTTGATCCTGTAGCCCAGAGGCTGGCC GAGTTACTCGGAAAAGAAGTTACCAAGGTTGATGACTGTATTGGAGATGAACCTAAAGAAGCAGTAAGTGAAATGGAAAA TGGGGATGTTCTCCTTTTAGAAAATACCCGTTTTCACGCCGGTGAAAAGAAAAATGACCCCGATTTCGCCAGACAGCTGG CTGAACTGGCCGAGGTATTTGTAAATGATGCCTTTGGTGCTGCCCACCGGGCCCATGCTTCTACTGTAGGGGTCACCGAG CATTTACCATCTGTAGCCGGATTTTTATTGCAGAGGGAGTTAAATGCCCTGGGAGAGGCTATGGAGAACCCCGGACATCC CTTTGTTGCTATCTTAGGTGGTGCCAAGGTTTCAGATAAAATCGGGGTTATTAAAAATCTCCTCGATAAAGTAGACTACC TCCTGGTTGGTGGTGGTATTGCCAATACCTTCTTACTGGCCAAGGGTTATGAAGTAGGGGATTCCCTGGTTGAAGAGGAC AAAGTAGAGCTGGCTAAAGAGCTCTTAAAAGAAGCTGAGGAAAAAGGTGTTGACCTTGTTTTACCTGAAGATGTAGTTAT TGCTGAAGAATTTAAAGAAGATGCCAACCATAAAGTTGTCAGTGCTGATAGTATTCCTGAAGGCTGGCAAATCCTTGACA GTGGTGGGCCAAAAACCATCGAGAAATACAGTGATATCATCGCTAAAGCTGAAACCGTTATCTGGAATGGACCTATCGGG GTTTTTGAAATGGATACCTTTGCTAAAGGTACCAATGCCCTGGCTGAAGCTATGGCCAGATCCAGTGCCAGAACCGTAAT TGGTGGTGGTGACTCCGCAGCTGCTGTTAAGAAAGCCGGTTTAGAGGATAAGATGAGTCATATTTCAACCGGTGGTGGTG CTTCCCTGATGTTCTTTGAAGGAAAGCCCTTACCCGGTGTTGAAGCATTAGATGATGTTGAGTAA
Upstream 100 bases:
>100_bases AATGAGACTGTATATATTAGGGATGGTTCGTATATTACTTTTCTCAGTTTAGCCCGGTATATTTCGGGATAAACGACAAA TAATAATGGAGGTGGGATAA
Downstream 100 bases:
>100_bases GGAGGGGATTTTGTGAGGACACCGTTTATTGCCGGTAACTGGAAGATGAACTTGACATTGAAAGAATCGGTGGCCCTGGT AGAAGAATTAAAAGACCTGG
Product: Phosphoglycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MKKTLKDVDFKGKRTLVRVDFNVPLEDGKITDDTRIEAALPTIKYLVDEGAKVILMSHLGRPKGKVVDSLRLDPVAQRLA ELLGKEVTKVDDCIGDEPKEAVSEMENGDVLLLENTRFHAGEKKNDPDFARQLAELAEVFVNDAFGAAHRAHASTVGVTE HLPSVAGFLLQRELNALGEAMENPGHPFVAILGGAKVSDKIGVIKNLLDKVDYLLVGGGIANTFLLAKGYEVGDSLVEED KVELAKELLKEAEEKGVDLVLPEDVVIAEEFKEDANHKVVSADSIPEGWQILDSGGPKTIEKYSDIIAKAETVIWNGPIG VFEMDTFAKGTNALAEAMARSSARTVIGGGDSAAAVKKAGLEDKMSHISTGGGASLMFFEGKPLPGVEALDDVE
Sequences:
>Translated_394_residues MKKTLKDVDFKGKRTLVRVDFNVPLEDGKITDDTRIEAALPTIKYLVDEGAKVILMSHLGRPKGKVVDSLRLDPVAQRLA ELLGKEVTKVDDCIGDEPKEAVSEMENGDVLLLENTRFHAGEKKNDPDFARQLAELAEVFVNDAFGAAHRAHASTVGVTE HLPSVAGFLLQRELNALGEAMENPGHPFVAILGGAKVSDKIGVIKNLLDKVDYLLVGGGIANTFLLAKGYEVGDSLVEED KVELAKELLKEAEEKGVDLVLPEDVVIAEEFKEDANHKVVSADSIPEGWQILDSGGPKTIEKYSDIIAKAETVIWNGPIG VFEMDTFAKGTNALAEAMARSSARTVIGGGDSAAAVKKAGLEDKMSHISTGGGASLMFFEGKPLPGVEALDDVE >Mature_394_residues MKKTLKDVDFKGKRTLVRVDFNVPLEDGKITDDTRIEAALPTIKYLVDEGAKVILMSHLGRPKGKVVDSLRLDPVAQRLA ELLGKEVTKVDDCIGDEPKEAVSEMENGDVLLLENTRFHAGEKKNDPDFARQLAELAEVFVNDAFGAAHRAHASTVGVTE HLPSVAGFLLQRELNALGEAMENPGHPFVAILGGAKVSDKIGVIKNLLDKVDYLLVGGGIANTFLLAKGYEVGDSLVEED KVELAKELLKEAEEKGVDLVLPEDVVIAEEFKEDANHKVVSADSIPEGWQILDSGGPKTIEKYSDIIAKAETVIWNGPIG VFEMDTFAKGTNALAEAMARSSARTVIGGGDSAAAVKKAGLEDKMSHISTGGGASLMFFEGKPLPGVEALDDVE
Specific function: Second phase of glycolysis; second step. [C]
COG id: COG0126
COG function: function code G; 3-phosphoglycerate kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate kinase family [H]
Homologues:
Organism=Homo sapiens, GI4505763, Length=415, Percent_Identity=47.710843373494, Blast_Score=375, Evalue=1e-104, Organism=Homo sapiens, GI31543397, Length=415, Percent_Identity=47.710843373494, Blast_Score=368, Evalue=1e-102, Organism=Escherichia coli, GI1789294, Length=390, Percent_Identity=45.1282051282051, Blast_Score=314, Evalue=6e-87, Organism=Caenorhabditis elegans, GI17508823, Length=414, Percent_Identity=49.0338164251208, Blast_Score=381, Evalue=1e-106, Organism=Saccharomyces cerevisiae, GI6319857, Length=412, Percent_Identity=49.2718446601942, Blast_Score=371, Evalue=1e-103, Organism=Drosophila melanogaster, GI24581203, Length=413, Percent_Identity=45.0363196125908, Blast_Score=334, Evalue=5e-92, Organism=Drosophila melanogaster, GI17136394, Length=410, Percent_Identity=44.6341463414634, Blast_Score=320, Evalue=1e-87,
Paralogues:
None
Copy number: 2990 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1460 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001576 - InterPro: IPR015901 - InterPro: IPR015911 - InterPro: IPR015824 [H]
Pfam domain/function: PF00162 PGK [H]
EC number: =2.7.2.3 [H]
Molecular weight: Translated: 42251; Mature: 42251
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: PS00111 PGLYCERATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTLKDVDFKGKRTLVRVDFNVPLEDGKITDDTRIEAALPTIKYLVDEGAKVILMSHLG CCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHCC RPKGKVVDSLRLDPVAQRLAELLGKEVTKVDDCIGDEPKEAVSEMENGDVLLLENTRFHA CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEECCEECC GEKKNDPDFARQLAELAEVFVNDAFGAAHRAHASTVGVTEHLPSVAGFLLQRELNALGEA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH MENPGHPFVAILGGAKVSDKIGVIKNLLDKVDYLLVGGGIANTFLLAKGYEVGDSLVEED HHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHEEEECCCHHHHHHHCCCCHHHHHHHHHH KVELAKELLKEAEEKGVDLVLPEDVVIAEEFKEDANHKVVSADSIPEGWQILDSGGPKTI HHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHCCCCEEEECCCCCCCCEEECCCCCHHH EKYSDIIAKAETVIWNGPIGVFEMDTFAKGTNALAEAMARSSARTVIGGGDSAAAVKKAG HHHHHHHHHHHEEEECCCCCEEECHHHHCCHHHHHHHHHHCCCCEEECCCCCHHHHHHCC LEDKMSHISTGGGASLMFFEGKPLPGVEALDDVE HHHHHHHHCCCCCCEEEEECCCCCCCCCHHCCCC >Mature Secondary Structure MKKTLKDVDFKGKRTLVRVDFNVPLEDGKITDDTRIEAALPTIKYLVDEGAKVILMSHLG CCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHCC RPKGKVVDSLRLDPVAQRLAELLGKEVTKVDDCIGDEPKEAVSEMENGDVLLLENTRFHA CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEECCEECC GEKKNDPDFARQLAELAEVFVNDAFGAAHRAHASTVGVTEHLPSVAGFLLQRELNALGEA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH MENPGHPFVAILGGAKVSDKIGVIKNLLDKVDYLLVGGGIANTFLLAKGYEVGDSLVEED HHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHEEEECCCHHHHHHHCCCCHHHHHHHHHH KVELAKELLKEAEEKGVDLVLPEDVVIAEEFKEDANHKVVSADSIPEGWQILDSGGPKTI HHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHCCCCEEEECCCCCCCCEEECCCCCHHH EKYSDIIAKAETVIWNGPIGVFEMDTFAKGTNALAEAMARSSARTVIGGGDSAAAVKKAG HHHHHHHHHHHEEEECCCCCEEECHHHHCCHHHHHHHHHHCCCCEEECCCCCHHHHHHCC LEDKMSHISTGGGASLMFFEGKPLPGVEALDDVE HHHHHHHHCCCCCCEEEEECCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA