Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

Click here to switch to the map view.

The map label for this gene is 220932414

Identifier: 220932414

GI number: 220932414

Start: 1690065

End: 1690220

Strand: Reverse

Name: 220932414

Synonym: Hore_15780

Alternate gene names: NA

Gene position: 1690220-1690065 (Counterclockwise)

Preceding gene: 220932415

Following gene: 220932413

Centisome position: 65.56

GC content: 29.49

Gene sequence:

>156_bases
ATGGTTATAGAAAAATACACTGTATACAGAGATATAGCAAAATTCATTAATAAAATAAACCAGGTGAACAAATATTATAT
ATTAAAGGGGAGGGCCCGGCGCCCTCCTTTTATGTATATTTTACATACTATTTCTCTTACAGGATATCTAATTTAA

Upstream 100 bases:

>100_bases
TATAACTTAAGGTAAGAAGTGGTAAAATACCTGTAAGCGAATAAAGTTAAAGAATATAACACTACTTGAAGCAGGGGTTA
TAAAAAAGCAGAAGGCGAAG

Downstream 100 bases:

>100_bases
TGGTATCGGAAAAAAATAGTTTCAGGAAAGAACCCGGGAGGATTGTTTTTTTAAAATAAGTGTGTTACAATATTTAATTG
AGAAAGCCCTATAATCATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 51; Mature: 51

Protein sequence:

>51_residues
MVIEKYTVYRDIAKFINKINQVNKYYILKGRARRPPFMYILHTISLTGYLI

Sequences:

>Translated_51_residues
MVIEKYTVYRDIAKFINKINQVNKYYILKGRARRPPFMYILHTISLTGYLI
>Mature_51_residues
MVIEKYTVYRDIAKFINKINQVNKYYILKGRARRPPFMYILHTISLTGYLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6168; Mature: 6168

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIEKYTVYRDIAKFINKINQVNKYYILKGRARRPPFMYILHTISLTGYLI
CCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHEECC
>Mature Secondary Structure
MVIEKYTVYRDIAKFINKINQVNKYYILKGRARRPPFMYILHTISLTGYLI
CCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA