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The map label for this gene is 220932353

Identifier: 220932353

GI number: 220932353

Start: 1619333

End: 1620199

Strand: Reverse

Name: 220932353

Synonym: Hore_15160

Alternate gene names: NA

Gene position: 1620199-1619333 (Counterclockwise)

Preceding gene: 220932354

Following gene: 220932352

Centisome position: 62.84

GC content: 30.45

Gene sequence:

>867_bases
ATGTATAATATAACTTATAATTTAAAAATTGTTACCCCGGTATATTGTAAAGGGTCTGATAACAGAAAAGTGGAGTTAAG
ACCTGCTAGCATTACTAGCATTAAAGGAATGATGAGATATTGGTTTAGGGCGTTGACTGCTGAAAGAGACCTAAATGAAT
TACATAAAAAAGAAAATAAGATTTTTGGAAGTACTAAAAATGCTTCAAAATTTGCAATAAGAATTAGAGATATTAACCTA
ATTAATAAAAAAAATAACTTAGAAGATTATTACTTGCTTCCCCATAATGAAAAAAAACGTAATGAAAACCCTGTGCCTAT
TAAGGTATTAAAATCTGGTCTTTCTTTTAATCTTGAATTTATATTTAAAAGTTTTGAAGAAGAATTAATTGATAACGTTA
AGGATGTGTTTACCCTTTCCCTTCTTCTGGGTGGTGTAGGACAGCGGTCTAGAAGAGGATTTGGCAGTATAAGGGATAAA
AACTGTAAGTTTGATAACAAAGAAGAACTTTTAAAAAAAATTGCAGGTATTTTACAGGATTTTGGAAGGCAGGTTGAAGT
TAAGGATGGAGAATATATTAGGGTTGTTGATAATCAAAGGTATTCTTATCCTGTAATTAAAGAAATTTATATAGGCAAAC
CAGAAGCAAATTTTGAAAAAATGTTAGAAAAGATTGGACAGGCTTCAAAAAAGGATAAATCTTTGGGAAGCATTAACCCT
ACTAGGATGGCTTCCCCTGTTTATGTAACAGTAGTAAAAATAAAAGACGATTATTATCCCCTTATTACGAAACTAGAACC
TATTTATCCTGAAGGGATTGAAGGCAATGTTGAAGTATTAGAAAAATTTATTGATGAATTGAGGTGA

Upstream 100 bases:

>100_bases
AAAGTAATTTTTTGTTGGTTATGTTGCAATGAATAGATAAAGTCAAAAGGTGATATATTTGTAAAAATACAGTCAATAGA
TTAATTGGAGGAGGTTATAA

Downstream 100 bases:

>100_bases
GATTGTGAAAAAGATATTTAAAGAACACCCTTTATCAGGGGAACAATTGATAAAAACTTTTGAAGACTACATACCTGAGA
TAAGTTTGAAGAATAAATCA

Product: CRISPR-associated RAMP protein, Cmr1 family

Products: NA

Alternate protein names: CRISPR-Associated RAMP Protein; Cytoplasmic Protein; Crispr-Associated Ramp Protein Cmr1 Family; Cmr1 Family CRISPR-Associated RAMP Protein; CRISPR-Associated RAMP Cmr1 Family Protein

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MYNITYNLKIVTPVYCKGSDNRKVELRPASITSIKGMMRYWFRALTAERDLNELHKKENKIFGSTKNASKFAIRIRDINL
INKKNNLEDYYLLPHNEKKRNENPVPIKVLKSGLSFNLEFIFKSFEEELIDNVKDVFTLSLLLGGVGQRSRRGFGSIRDK
NCKFDNKEELLKKIAGILQDFGRQVEVKDGEYIRVVDNQRYSYPVIKEIYIGKPEANFEKMLEKIGQASKKDKSLGSINP
TRMASPVYVTVVKIKDDYYPLITKLEPIYPEGIEGNVEVLEKFIDELR

Sequences:

>Translated_288_residues
MYNITYNLKIVTPVYCKGSDNRKVELRPASITSIKGMMRYWFRALTAERDLNELHKKENKIFGSTKNASKFAIRIRDINL
INKKNNLEDYYLLPHNEKKRNENPVPIKVLKSGLSFNLEFIFKSFEEELIDNVKDVFTLSLLLGGVGQRSRRGFGSIRDK
NCKFDNKEELLKKIAGILQDFGRQVEVKDGEYIRVVDNQRYSYPVIKEIYIGKPEANFEKMLEKIGQASKKDKSLGSINP
TRMASPVYVTVVKIKDDYYPLITKLEPIYPEGIEGNVEVLEKFIDELR
>Mature_288_residues
MYNITYNLKIVTPVYCKGSDNRKVELRPASITSIKGMMRYWFRALTAERDLNELHKKENKIFGSTKNASKFAIRIRDINL
INKKNNLEDYYLLPHNEKKRNENPVPIKVLKSGLSFNLEFIFKSFEEELIDNVKDVFTLSLLLGGVGQRSRRGFGSIRDK
NCKFDNKEELLKKIAGILQDFGRQVEVKDGEYIRVVDNQRYSYPVIKEIYIGKPEANFEKMLEKIGQASKKDKSLGSINP
TRMASPVYVTVVKIKDDYYPLITKLEPIYPEGIEGNVEVLEKFIDELR

Specific function: Unknown

COG id: COG1367

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33389; Mature: 33389

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYNITYNLKIVTPVYCKGSDNRKVELRPASITSIKGMMRYWFRALTAERDLNELHKKENK
CCEEEEEEEEEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFGSTKNASKFAIRIRDINLINKKNNLEDYYLLPHNEKKRNENPVPIKVLKSGLSFNLEF
HCCCCCCCCEEEEEEEEEEEECCCCCCCCEEECCCCHHHCCCCCCHHHHHHCCCCCHHHH
IFKSFEEELIDNVKDVFTLSLLLGGVGQRSRRGFGSIRDKNCKFDNKEELLKKIAGILQD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
FGRQVEVKDGEYIRVVDNQRYSYPVIKEIYIGKPEANFEKMLEKIGQASKKDKSLGSINP
HCCEEEECCCCEEEEECCCCCCCCHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCH
TRMASPVYVTVVKIKDDYYPLITKLEPIYPEGIEGNVEVLEKFIDELR
HHCCCCEEEEEEEEECCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MYNITYNLKIVTPVYCKGSDNRKVELRPASITSIKGMMRYWFRALTAERDLNELHKKENK
CCEEEEEEEEEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFGSTKNASKFAIRIRDINLINKKNNLEDYYLLPHNEKKRNENPVPIKVLKSGLSFNLEF
HCCCCCCCCEEEEEEEEEEEECCCCCCCCEEECCCCHHHCCCCCCHHHHHHCCCCCHHHH
IFKSFEEELIDNVKDVFTLSLLLGGVGQRSRRGFGSIRDKNCKFDNKEELLKKIAGILQD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
FGRQVEVKDGEYIRVVDNQRYSYPVIKEIYIGKPEANFEKMLEKIGQASKKDKSLGSINP
HCCEEEECCCCEEEEECCCCCCCCHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCH
TRMASPVYVTVVKIKDDYYPLITKLEPIYPEGIEGNVEVLEKFIDELR
HHCCCCEEEEEEEEECCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA