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The map label for this gene is 220932352

Identifier: 220932352

GI number: 220932352

Start: 1617298

End: 1619328

Strand: Reverse

Name: 220932352

Synonym: Hore_15150

Alternate gene names: NA

Gene position: 1619328-1617298 (Counterclockwise)

Preceding gene: 220932353

Following gene: 220932351

Centisome position: 62.81

GC content: 31.66

Gene sequence:

>2031_bases
GTGAAAAAGATATTTAAAGAACACCCTTTATCAGGGGAACAATTGATAAAAACTTTTGAAGACTACATACCTGAGATAAG
TTTGAAGAATAAATCATTAGCTATTTTTACAATAGGACCGGTTCAATCTTTTATATCTGCGGCTAAGAAAACTAAAGAAT
ACTGGGCTGGAAGTTATTTGCTCTCATATTTAATCTGGCAGGCACTAAAACATATCATGGAAGAAAGCAAAGAAGGTGAA
AACAGTATTATTTATCCCTATTTAAAAAATCAGCCTCTTTATAAAGATTTAAGAAATGAAGAGATTACACTACCTACTTT
ACCCAATCGCTTTCTGGCAATTTTAGAAAACAATGAAGCAGAACAATTATTAGAAGAATGCAAAAAAATGGTTGAGAATA
AACTTTTGGATATTGCCATTAATCTTTTCAATATCAGTAAGGAAGATAAAATATATAAACAGCTGGAAGAACTACTTGAA
ATATACTGGGTATTATTACCTCTGGAAAAGAGCAAAAAAACAGAAATAGAAAGATACAGAAGTTTAACTGGCATGGAACC
AGCAAATGATATTTCGCATTATTCTCTGGTAACATCTATTATTGAAGAATTAATGGGGGCTCGTAAAAATATTAGGGAAT
TTAATTATATAGAAGAAAAGGGTGTTAAATGCTATATCTGTGGAGAAAGAACTGGATTTGAACCTGGAATCATGAATATT
GAAGATGAGAAGAAAATCTGTGGAGTCTGTGGTTTAAAAAGGAAGTTCAGTGATTATTTAAAAACAGAATTTGGAATTGA
AATTCATTATCCGTCAGTAATTGATATTGCCACAGCCGATTATAAGGAAGAACTGGTTAGCAGTCTGGACAAAGATGAGT
TAAATCAGTTATTGAATTATATGGATAAGGAGTTTGGTAACCAGGATTACCAAATGCCCGAATTGGTTAATGGACTGGTA
GGAGATGTTAAAAGTAAGTCTCCGGAGGAAAAAAAGGTATTAAAAATAAAAGGAACATATTTTGACATTGAAGGTAATGA
ACTTAAGGAAAGTATAAAAGTAAAAAAGCTACTTAAAAAGATTAATAAAAAATATAATCTTAAATTAAATAAATATTATG
CCTTGCTTTATATGGATGGAGATGACATGGGGAAATGGGTAAGTGGTGAGAAGTTAAAACATAGAGAAATGACTCCAGAA
TTTCATTACCTGATTAGTAAGTCTCTTACCAATTATTCTTTAAAGTTTGTTAAAAGGATTGTTGAAGGTAAAGGACGCAG
GGGAAAATTGGTTTATTCAGGTGGTGATGATGTAGTAGCTTTTGTCAATTTAAAAAATCTTTTTGAAGTGCTCAGGGAGT
TAAGGGGTTATTTTTCAGGTAATGTATTTGATAATCAAGTTAATTATAAGGCCAGTGATGGAATTATACGAGAAAAGGGA
GAGGACATATTAACCCTGGGTAGTAAAGCAAGTGTCAGTATGGGTATTTGTATTGCCCATTATAAAGAACCCCTTCATTT
TGTTATTAAAAATGCAAGGGCAATGGAGAAAAAAGCCAAAAAACATATTATTTCAGGGAATCGAAAGAAGAATGCCTTTG
CCATTGGATTAATTAAACACTCCGGTGAAACAAGGGAAGCGGTCTCAAAATGGTTTTATGATGATGGAGAAGATATAATT
GAAAAAGGGATTAAGCCTCTGCTGAACTTAATTCAAAAAGAGCATATTAGTCAAAGCTTTATATATACATTAAAAAACGA
AATGGAGTTATTGGAAGGTCTAGAGGCTGGTGATATTCTGGATGATGAAATAATAAGATTAATGAAACGGAAAATTACTG
TAGATGAAGATGAGGAAAAAGAAGATAGCAAAAGAAAGAAACTGCAAAAACAGACTGAAGCCAGTTTGAAAGTCTTACAG
CAGATTTATAAAAATAGATACTGGATTGAGGATAATAAAGAGCCGAACAATATCTACAATTTTATTAATTTACTGGAGAT
TATATTTTTTATAGGTAAGAGAGGTGAATAA

Upstream 100 bases:

>100_bases
TATTATCCCCTTATTACGAAACTAGAACCTATTTATCCTGAAGGGATTGAAGGCAATGTTGAAGTATTAGAAAAATTTAT
TGATGAATTGAGGTGAGATT

Downstream 100 bases:

>100_bases
CTTGCAGGTAACTGTTAGTCCGCTGGATGTATTATTTTTTAGGAATGGGAAACCTTTTGATGCTGATGACAGTCCCATAG
GTGAAACTATAGATATGCCC

Product: CRISPR-associated protein, Crm2 family

Products: NA

Alternate protein names: CRISPR-Associated RAMP Crm2 Family Protein; Crm2 Family CRISPR-Associated Protein; Hydrolase; CRISPR-Associated Protein; HD Superfamily Hydrolase; Hydrolase Of HD Superfamily-Like Protein

Number of amino acids: Translated: 676; Mature: 676

Protein sequence:

>676_residues
MKKIFKEHPLSGEQLIKTFEDYIPEISLKNKSLAIFTIGPVQSFISAAKKTKEYWAGSYLLSYLIWQALKHIMEESKEGE
NSIIYPYLKNQPLYKDLRNEEITLPTLPNRFLAILENNEAEQLLEECKKMVENKLLDIAINLFNISKEDKIYKQLEELLE
IYWVLLPLEKSKKTEIERYRSLTGMEPANDISHYSLVTSIIEELMGARKNIREFNYIEEKGVKCYICGERTGFEPGIMNI
EDEKKICGVCGLKRKFSDYLKTEFGIEIHYPSVIDIATADYKEELVSSLDKDELNQLLNYMDKEFGNQDYQMPELVNGLV
GDVKSKSPEEKKVLKIKGTYFDIEGNELKESIKVKKLLKKINKKYNLKLNKYYALLYMDGDDMGKWVSGEKLKHREMTPE
FHYLISKSLTNYSLKFVKRIVEGKGRRGKLVYSGGDDVVAFVNLKNLFEVLRELRGYFSGNVFDNQVNYKASDGIIREKG
EDILTLGSKASVSMGICIAHYKEPLHFVIKNARAMEKKAKKHIISGNRKKNAFAIGLIKHSGETREAVSKWFYDDGEDII
EKGIKPLLNLIQKEHISQSFIYTLKNEMELLEGLEAGDILDDEIIRLMKRKITVDEDEEKEDSKRKKLQKQTEASLKVLQ
QIYKNRYWIEDNKEPNNIYNFINLLEIIFFIGKRGE

Sequences:

>Translated_676_residues
MKKIFKEHPLSGEQLIKTFEDYIPEISLKNKSLAIFTIGPVQSFISAAKKTKEYWAGSYLLSYLIWQALKHIMEESKEGE
NSIIYPYLKNQPLYKDLRNEEITLPTLPNRFLAILENNEAEQLLEECKKMVENKLLDIAINLFNISKEDKIYKQLEELLE
IYWVLLPLEKSKKTEIERYRSLTGMEPANDISHYSLVTSIIEELMGARKNIREFNYIEEKGVKCYICGERTGFEPGIMNI
EDEKKICGVCGLKRKFSDYLKTEFGIEIHYPSVIDIATADYKEELVSSLDKDELNQLLNYMDKEFGNQDYQMPELVNGLV
GDVKSKSPEEKKVLKIKGTYFDIEGNELKESIKVKKLLKKINKKYNLKLNKYYALLYMDGDDMGKWVSGEKLKHREMTPE
FHYLISKSLTNYSLKFVKRIVEGKGRRGKLVYSGGDDVVAFVNLKNLFEVLRELRGYFSGNVFDNQVNYKASDGIIREKG
EDILTLGSKASVSMGICIAHYKEPLHFVIKNARAMEKKAKKHIISGNRKKNAFAIGLIKHSGETREAVSKWFYDDGEDII
EKGIKPLLNLIQKEHISQSFIYTLKNEMELLEGLEAGDILDDEIIRLMKRKITVDEDEEKEDSKRKKLQKQTEASLKVLQ
QIYKNRYWIEDNKEPNNIYNFINLLEIIFFIGKRGE
>Mature_676_residues
MKKIFKEHPLSGEQLIKTFEDYIPEISLKNKSLAIFTIGPVQSFISAAKKTKEYWAGSYLLSYLIWQALKHIMEESKEGE
NSIIYPYLKNQPLYKDLRNEEITLPTLPNRFLAILENNEAEQLLEECKKMVENKLLDIAINLFNISKEDKIYKQLEELLE
IYWVLLPLEKSKKTEIERYRSLTGMEPANDISHYSLVTSIIEELMGARKNIREFNYIEEKGVKCYICGERTGFEPGIMNI
EDEKKICGVCGLKRKFSDYLKTEFGIEIHYPSVIDIATADYKEELVSSLDKDELNQLLNYMDKEFGNQDYQMPELVNGLV
GDVKSKSPEEKKVLKIKGTYFDIEGNELKESIKVKKLLKKINKKYNLKLNKYYALLYMDGDDMGKWVSGEKLKHREMTPE
FHYLISKSLTNYSLKFVKRIVEGKGRRGKLVYSGGDDVVAFVNLKNLFEVLRELRGYFSGNVFDNQVNYKASDGIIREKG
EDILTLGSKASVSMGICIAHYKEPLHFVIKNARAMEKKAKKHIISGNRKKNAFAIGLIKHSGETREAVSKWFYDDGEDII
EKGIKPLLNLIQKEHISQSFIYTLKNEMELLEGLEAGDILDDEIIRLMKRKITVDEDEEKEDSKRKKLQKQTEASLKVLQ
QIYKNRYWIEDNKEPNNIYNFINLLEIIFFIGKRGE

Specific function: Unknown

COG id: COG1353

COG function: function code R; Predicted hydrolase of the HD superfamily (permuted catalytic motifs)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 78532; Mature: 78532

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIFKEHPLSGEQLIKTFEDYIPEISLKNKSLAIFTIGPVQSFISAAKKTKEYWAGSYL
CCCCCHHCCCCHHHHHHHHHHHCCCCEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHH
LSYLIWQALKHIMEESKEGENSIIYPYLKNQPLYKDLRNEEITLPTLPNRFLAILENNEA
HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHCCCCEECCCCCCHHEEEECCCCH
EQLLEECKKMVENKLLDIAINLFNISKEDKIYKQLEELLEIYWVLLPLEKSKKTEIERYR
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
SLTGMEPANDISHYSLVTSIIEELMGARKNIREFNYIEEKGVKCYICGERTGFEPGIMNI
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCC
EDEKKICGVCGLKRKFSDYLKTEFGIEIHYPSVIDIATADYKEELVSSLDKDELNQLLNY
CCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEHHHHHHHHHHHHHCCHHHHHHHHHH
MDKEFGNQDYQMPELVNGLVGDVKSKSPEEKKVLKIKGTYFDIEGNELKESIKVKKLLKK
HHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCEEECCCHHHHHHHHHHHHHHH
INKKYNLKLNKYYALLYMDGDDMGKWVSGEKLKHREMTPEFHYLISKSLTNYSLKFVKRI
HCHHHCEEEEEEEEEEEECCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
VEGKGRRGKLVYSGGDDVVAFVNLKNLFEVLRELRGYFSGNVFDNQVNYKASDGIIREKG
HHCCCCCCEEEEECCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCC
EDILTLGSKASVSMGICIAHYKEPLHFVIKNARAMEKKAKKHIISGNRKKNAFAIGLIKH
CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEC
SGETREAVSKWFYDDGEDIIEKGIKPLLNLIQKEHISQSFIYTLKNEMELLEGLEAGDIL
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DDEIIRLMKRKITVDEDEEKEDSKRKKLQKQTEASLKVLQQIYKNRYWIEDNKEPNNIYN
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHH
FINLLEIIFFIGKRGE
HHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKKIFKEHPLSGEQLIKTFEDYIPEISLKNKSLAIFTIGPVQSFISAAKKTKEYWAGSYL
CCCCCHHCCCCHHHHHHHHHHHCCCCEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHH
LSYLIWQALKHIMEESKEGENSIIYPYLKNQPLYKDLRNEEITLPTLPNRFLAILENNEA
HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHCCCCEECCCCCCHHEEEECCCCH
EQLLEECKKMVENKLLDIAINLFNISKEDKIYKQLEELLEIYWVLLPLEKSKKTEIERYR
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
SLTGMEPANDISHYSLVTSIIEELMGARKNIREFNYIEEKGVKCYICGERTGFEPGIMNI
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCC
EDEKKICGVCGLKRKFSDYLKTEFGIEIHYPSVIDIATADYKEELVSSLDKDELNQLLNY
CCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEHHHHHHHHHHHHHCCHHHHHHHHHH
MDKEFGNQDYQMPELVNGLVGDVKSKSPEEKKVLKIKGTYFDIEGNELKESIKVKKLLKK
HHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCEEECCCHHHHHHHHHHHHHHH
INKKYNLKLNKYYALLYMDGDDMGKWVSGEKLKHREMTPEFHYLISKSLTNYSLKFVKRI
HCHHHCEEEEEEEEEEEECCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
VEGKGRRGKLVYSGGDDVVAFVNLKNLFEVLRELRGYFSGNVFDNQVNYKASDGIIREKG
HHCCCCCCEEEEECCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCC
EDILTLGSKASVSMGICIAHYKEPLHFVIKNARAMEKKAKKHIISGNRKKNAFAIGLIKH
CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEC
SGETREAVSKWFYDDGEDIIEKGIKPLLNLIQKEHISQSFIYTLKNEMELLEGLEAGDIL
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DDEIIRLMKRKITVDEDEEKEDSKRKKLQKQTEASLKVLQQIYKNRYWIEDNKEPNNIYN
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHH
FINLLEIIFFIGKRGE
HHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA