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The map label for this gene is yigC [C]

Identifier: 220932318

GI number: 220932318

Start: 1577169

End: 1578614

Strand: Reverse

Name: yigC [C]

Synonym: Hore_14820

Alternate gene names: 220932318

Gene position: 1578614-1577169 (Counterclockwise)

Preceding gene: 220932319

Following gene: 220932317

Centisome position: 61.23

GC content: 46.33

Gene sequence:

>1446_bases
ATGGCTTACCGTGATTTAAGTGACTTTATTAAGACCCTTGAAAGGGAAAATGAACTGGTGAGGGTCGGGGTTGAAGTAGA
CCCGGTCCTGGAAATAACAGAAATAACCGACCGTGTTGTTAAAAATGGGGGGCCGGCCCTTTTATTTGAAAATGTTAAGG
GTTCTGATTTTCCGGTTTTAATTAATGCCTTTGGTTCTATCAGGAGAATGGAGCTGGCTCTGGAGGCAGAAAGCCTTGAT
GATATAGGGGACAGGATAAATCAGTATTTACAGCTGCCGACCCCGGAAAATTTTCTGGATAAGTTAAAAATGCTCCCCCT
GTTGAAAGAACTGGGGGATTTTTTACCGCGTACAGTAAAGAAGGCTCCCTGCCAGGAAGTGGTTGAGGAGAATGTTGACC
TGGGAAGTCTTCCCATATTGAAGTGCTGGCCCGGTGACGGGGGTCGTTATATTACCCTTCCCCTGGTTTTTACAAAAGAC
CCGGGGACAGGTCGCCAGAATGTGGGGATGTACCGCCTTCAGGTTTTTGATAAAAAAACGACCGGTATGCACTGGCATAT
ACATAAAGATGGTGCCGAGAATTATCGGAAACATCTTGGCAACAGGGAAAAAATGGAGGTTGCTGTAGCCATCGGGGCCG
ATCCCGCTACTATATATGCGGCCACCGCTCCCCTGCCAGCCGGGATAGATGAGATGCTTTTTGCCGGGTTTTTACGTAAG
GAGCCGGTTGAGATGGTAAAATGCCGGACTGTGGACCTTAAAGTCCCGGCCAATGCTGAAATAATTCTCGAGGGTTATGT
TAAACCGGGGGAGTTAAGGAAAGAAGGACCCTTTGGTGACCATACGGGTTATTATTCCCTGGTTGATGAGTATCCTGTCT
TTCATGTCCAGGCCATTACCAGGCGGAATCAGCCCGTTTATAATGCAACAGTAGTTGGCAAACCTCCCATGGAAGATTGT
TTTATGGCTAAAGCAACGGAGAGGATCTTCTTACCACTCCTCAAGATGCAACTTCCGGAAATTGTAGATATGAATTTACC
CCTCGAGGGGGTATTCCATAACTGTGCTATAATTTCTATAAAAAAATCCTACCCCGGCCATGCTAAAAAAGTAATGCACG
CCCTGTGGGGGCTGGGTCAGATGATGTATACTAAAATGATTATTGTAGTTGATGAAGATGTCGATGTTCAGGACCTGTCA
ACAGTGGCCTGGAAGGTGTTTAATAATATAGATGCCAGACGGGATGTAGTTATTGTCGATGGTCCGCTTGATGCCCTGGA
CCACTCTTCCCCTGTCCGCCATTACGGCTCCAAGATGGGGATTGATGCTACTAAAGCCTGGCCGGAAGAGGGTCATACAA
GGGAGTGGCCCCCTGAAATAGAGATGAATAAAAAGATAAAAAAGCTGGTCGATAAGAGGTGGCAGGAGTATGGAATTAAT
ATATAA

Upstream 100 bases:

>100_bases
AATATGTCGAGCATTTACCTGATGAAAGGGTAAAAGAGGAGCTTAATTTTATATTATCGCTTCAATTAAATCGACAACAA
TAAAGACAGGGTGATGGTAT

Downstream 100 bases:

>100_bases
AAAAGTAAAAACCTATGCCGACCTGGTTATGTTTGAACATACTATTTTTGCTCTTCCTTTTGCCTATCTGTCTTTATTCC
TGGCTTTGGGTGGGAAAATT

Product: UbiD family decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 481; Mature: 480

Protein sequence:

>481_residues
MAYRDLSDFIKTLERENELVRVGVEVDPVLEITEITDRVVKNGGPALLFENVKGSDFPVLINAFGSIRRMELALEAESLD
DIGDRINQYLQLPTPENFLDKLKMLPLLKELGDFLPRTVKKAPCQEVVEENVDLGSLPILKCWPGDGGRYITLPLVFTKD
PGTGRQNVGMYRLQVFDKKTTGMHWHIHKDGAENYRKHLGNREKMEVAVAIGADPATIYAATAPLPAGIDEMLFAGFLRK
EPVEMVKCRTVDLKVPANAEIILEGYVKPGELRKEGPFGDHTGYYSLVDEYPVFHVQAITRRNQPVYNATVVGKPPMEDC
FMAKATERIFLPLLKMQLPEIVDMNLPLEGVFHNCAIISIKKSYPGHAKKVMHALWGLGQMMYTKMIIVVDEDVDVQDLS
TVAWKVFNNIDARRDVVIVDGPLDALDHSSPVRHYGSKMGIDATKAWPEEGHTREWPPEIEMNKKIKKLVDKRWQEYGIN
I

Sequences:

>Translated_481_residues
MAYRDLSDFIKTLERENELVRVGVEVDPVLEITEITDRVVKNGGPALLFENVKGSDFPVLINAFGSIRRMELALEAESLD
DIGDRINQYLQLPTPENFLDKLKMLPLLKELGDFLPRTVKKAPCQEVVEENVDLGSLPILKCWPGDGGRYITLPLVFTKD
PGTGRQNVGMYRLQVFDKKTTGMHWHIHKDGAENYRKHLGNREKMEVAVAIGADPATIYAATAPLPAGIDEMLFAGFLRK
EPVEMVKCRTVDLKVPANAEIILEGYVKPGELRKEGPFGDHTGYYSLVDEYPVFHVQAITRRNQPVYNATVVGKPPMEDC
FMAKATERIFLPLLKMQLPEIVDMNLPLEGVFHNCAIISIKKSYPGHAKKVMHALWGLGQMMYTKMIIVVDEDVDVQDLS
TVAWKVFNNIDARRDVVIVDGPLDALDHSSPVRHYGSKMGIDATKAWPEEGHTREWPPEIEMNKKIKKLVDKRWQEYGIN
I
>Mature_480_residues
AYRDLSDFIKTLERENELVRVGVEVDPVLEITEITDRVVKNGGPALLFENVKGSDFPVLINAFGSIRRMELALEAESLDD
IGDRINQYLQLPTPENFLDKLKMLPLLKELGDFLPRTVKKAPCQEVVEENVDLGSLPILKCWPGDGGRYITLPLVFTKDP
GTGRQNVGMYRLQVFDKKTTGMHWHIHKDGAENYRKHLGNREKMEVAVAIGADPATIYAATAPLPAGIDEMLFAGFLRKE
PVEMVKCRTVDLKVPANAEIILEGYVKPGELRKEGPFGDHTGYYSLVDEYPVFHVQAITRRNQPVYNATVVGKPPMEDCF
MAKATERIFLPLLKMQLPEIVDMNLPLEGVFHNCAIISIKKSYPGHAKKVMHALWGLGQMMYTKMIIVVDEDVDVQDLST
VAWKVFNNIDARRDVVIVDGPLDALDHSSPVRHYGSKMGIDATKAWPEEGHTREWPPEIEMNKKIKKLVDKRWQEYGINI

Specific function: Unknown

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=489, Percent_Identity=44.5807770961145, Blast_Score=415, Evalue=1e-117,
Organism=Saccharomyces cerevisiae, GI6320748, Length=450, Percent_Identity=27.1111111111111, Blast_Score=120, Evalue=4e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR022390
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: 4.1.1.-

Molecular weight: Translated: 54318; Mature: 54186

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYRDLSDFIKTLERENELVRVGVEVDPVLEITEITDRVVKNGGPALLFENVKGSDFPVL
CCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCH
INAFGSIRRMELALEAESLDDIGDRINQYLQLPTPENFLDKLKMLPLLKELGDFLPRTVK
HHHHCCHHHHHEEHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KAPCQEVVEENVDLGSLPILKCWPGDGGRYITLPLVFTKDPGTGRQNVGMYRLQVFDKKT
CCCHHHHHHCCCCCCCCCEEEEECCCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEECCC
TGMHWHIHKDGAENYRKHLGNREKMEVAVAIGADPATIYAATAPLPAGIDEMLFAGFLRK
CCEEEEEECCCHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHC
EPVEMVKCRTVDLKVPANAEIILEGYVKPGELRKEGPFGDHTGYYSLVDEYPVFHVQAIT
CCHHHHEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEHH
RRNQPVYNATVVGKPPMEDCFMAKATERIFLPLLKMQLPEIVDMNLPLEGVFHNCAIISI
HCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHCCEEEEEE
KKSYPGHAKKVMHALWGLGQMMYTKMIIVVDEDVDVQDLSTVAWKVFNNIDARRDVVIVD
ECCCCCHHHHHHHHHHHHHHHHHCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEC
GPLDALDHSSPVRHYGSKMGIDATKAWPEEGHTREWPPEIEMNKKIKKLVDKRWQEYGIN
CCHHHHCCCCHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
I
C
>Mature Secondary Structure 
AYRDLSDFIKTLERENELVRVGVEVDPVLEITEITDRVVKNGGPALLFENVKGSDFPVL
CCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCH
INAFGSIRRMELALEAESLDDIGDRINQYLQLPTPENFLDKLKMLPLLKELGDFLPRTVK
HHHHCCHHHHHEEHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KAPCQEVVEENVDLGSLPILKCWPGDGGRYITLPLVFTKDPGTGRQNVGMYRLQVFDKKT
CCCHHHHHHCCCCCCCCCEEEEECCCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEECCC
TGMHWHIHKDGAENYRKHLGNREKMEVAVAIGADPATIYAATAPLPAGIDEMLFAGFLRK
CCEEEEEECCCHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHC
EPVEMVKCRTVDLKVPANAEIILEGYVKPGELRKEGPFGDHTGYYSLVDEYPVFHVQAIT
CCHHHHEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEHH
RRNQPVYNATVVGKPPMEDCFMAKATERIFLPLLKMQLPEIVDMNLPLEGVFHNCAIISI
HCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHCCEEEEEE
KKSYPGHAKKVMHALWGLGQMMYTKMIIVVDEDVDVQDLSTVAWKVFNNIDARRDVVIVD
ECCCCCHHHHHHHHHHHHHHHHHCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEC
GPLDALDHSSPVRHYGSKMGIDATKAWPEEGHTREWPPEIEMNKKIKKLVDKRWQEYGIN
CCHHHHCCCCHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
I
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]