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The map label for this gene is ybbK [C]

Identifier: 220932300

GI number: 220932300

Start: 1560632

End: 1561612

Strand: Reverse

Name: ybbK [C]

Synonym: Hore_14640

Alternate gene names: 220932300

Gene position: 1561612-1560632 (Counterclockwise)

Preceding gene: 220932301

Following gene: 220932299

Centisome position: 60.57

GC content: 40.77

Gene sequence:

>981_bases
ATGGCACTTTTAGTAATCTTGGGGGTAATCGCCCTATTTGTAATTATTTTAATTGTGAAAGGGATTGTGATCATACCCCA
GGCTGAAACCATGGTTATCGAACGTCTCGGTAGGTTTAACAGGGTCCTTGATTCTGGGGTTAATGTAATTATTCCTATCA
TTGAACGGCCCCAGACCATTGACTGGAAATATATTGATGAGGACCGCAAAGGAAACAAGATTGTTTTAAGAAGAAAGATT
TCCAGGATTGATTTAAGGGAAACAGTCTATGATTTCCCCAAGCAAAATGTTATTACCAAAGATAATGTTGCTATTGAGAT
AAATGCTATGCTATATTTCCAGATTACAGATCCCAAAAAGGCTGTCTATGAGATTAACAATCTCCCTAATGCCATTGAGA
AGTTAACCCAGACTACTTTAAGGAATGTTATCGGGGAACTGGAACTCGATGAAACCCTTGCCTCCCGGGATAAGATTAAC
AGCAAATTAAAATCTATTCTAGATGAAGCAACTGATAAATGGGGAGTTAAGGTTAACAGGGTTGAGCTTCAGGATATTGC
CCCACCTGAAGATATTAAAGAAGCTATGGAAAAACAGATGAGGGCTGAACGTGATAAAAGGGCAGCTATTTTAAAGGCTG
AAGGTAAAAAGAAATCAGCTATTCTGGAAGCCGAAGGTAAAAAAGAGGCTGAAATTAATGAGGCTGAAGGTAAGAAAATG
GCCCGCATTCTTGAAGCAGAGGGTGAACAGGAAGCTCGTATTAAGGTGGCCCAGGCCGAGGCCAAGGCTATCAAAACTAT
TGCTGCATCTGTTAAGGATGCCGGAGGGGACCCCACCCAGTACCTTATTGCCATAAGATATATTGAGACCCTGAGGGAAA
TGGTTGAGGGTAAAGATAATAAAGTTATTTATCTGCCCTATGAAGCAACCGGTATCCTGGGCTCAGTGGGAAGTATTAAA
GAATTGTTCCAGGAAGGTTAA

Upstream 100 bases:

>100_bases
GCAGGTAGAAGTAATTAAGGTTGATGGAGCTAAATTAATAGTTAAATAAGAATTCATTATAAATAAATTAAATTAAAAAT
AAATGACAGGAGGTTATTTT

Downstream 100 bases:

>100_bases
ACATGGATAGGTGAATCCTGGATAGCGTTATGGGAAAGAATATACAGGATAACAGTAAGAACAGCAGGGGGTTATTTCCC
CTGCTGTTTGTTGTTTTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MALLVILGVIALFVIILIVKGIVIIPQAETMVIERLGRFNRVLDSGVNVIIPIIERPQTIDWKYIDEDRKGNKIVLRRKI
SRIDLRETVYDFPKQNVITKDNVAIEINAMLYFQITDPKKAVYEINNLPNAIEKLTQTTLRNVIGELELDETLASRDKIN
SKLKSILDEATDKWGVKVNRVELQDIAPPEDIKEAMEKQMRAERDKRAAILKAEGKKKSAILEAEGKKEAEINEAEGKKM
ARILEAEGEQEARIKVAQAEAKAIKTIAASVKDAGGDPTQYLIAIRYIETLREMVEGKDNKVIYLPYEATGILGSVGSIK
ELFQEG

Sequences:

>Translated_326_residues
MALLVILGVIALFVIILIVKGIVIIPQAETMVIERLGRFNRVLDSGVNVIIPIIERPQTIDWKYIDEDRKGNKIVLRRKI
SRIDLRETVYDFPKQNVITKDNVAIEINAMLYFQITDPKKAVYEINNLPNAIEKLTQTTLRNVIGELELDETLASRDKIN
SKLKSILDEATDKWGVKVNRVELQDIAPPEDIKEAMEKQMRAERDKRAAILKAEGKKKSAILEAEGKKEAEINEAEGKKM
ARILEAEGEQEARIKVAQAEAKAIKTIAASVKDAGGDPTQYLIAIRYIETLREMVEGKDNKVIYLPYEATGILGSVGSIK
ELFQEG
>Mature_325_residues
ALLVILGVIALFVIILIVKGIVIIPQAETMVIERLGRFNRVLDSGVNVIIPIIERPQTIDWKYIDEDRKGNKIVLRRKIS
RIDLRETVYDFPKQNVITKDNVAIEINAMLYFQITDPKKAVYEINNLPNAIEKLTQTTLRNVIGELELDETLASRDKINS
KLKSILDEATDKWGVKVNRVELQDIAPPEDIKEAMEKQMRAERDKRAAILKAEGKKKSAILEAEGKKEAEINEAEGKKMA
RILEAEGEQEARIKVAQAEAKAIKTIAASVKDAGGDPTQYLIAIRYIETLREMVEGKDNKVIYLPYEATGILGSVGSIKE
LFQEG

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI7305503, Length=286, Percent_Identity=36.013986013986, Blast_Score=186, Evalue=3e-47,
Organism=Homo sapiens, GI38016911, Length=139, Percent_Identity=38.1294964028777, Blast_Score=102, Evalue=6e-22,
Organism=Homo sapiens, GI221316744, Length=139, Percent_Identity=35.2517985611511, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI21686995, Length=199, Percent_Identity=30.1507537688442, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI7657615, Length=212, Percent_Identity=23.5849056603774, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI20149563, Length=195, Percent_Identity=25.1282051282051, Blast_Score=69, Evalue=7e-12,
Organism=Escherichia coli, GI1786697, Length=324, Percent_Identity=36.7283950617284, Blast_Score=240, Evalue=8e-65,
Organism=Escherichia coli, GI1790616, Length=235, Percent_Identity=25.531914893617, Blast_Score=72, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI32564147, Length=289, Percent_Identity=33.5640138408304, Blast_Score=166, Evalue=1e-41,
Organism=Caenorhabditis elegans, GI17569493, Length=215, Percent_Identity=33.0232558139535, Blast_Score=123, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI193209764, Length=215, Percent_Identity=33.0232558139535, Blast_Score=122, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI17569497, Length=308, Percent_Identity=26.6233766233766, Blast_Score=115, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI17569499, Length=311, Percent_Identity=29.2604501607717, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI32566490, Length=222, Percent_Identity=31.0810810810811, Blast_Score=104, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI17570161, Length=222, Percent_Identity=34.6846846846847, Blast_Score=103, Evalue=9e-23,
Organism=Caenorhabditis elegans, GI193210507, Length=222, Percent_Identity=34.6846846846847, Blast_Score=103, Evalue=9e-23,
Organism=Caenorhabditis elegans, GI25153583, Length=222, Percent_Identity=31.981981981982, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI71987612, Length=222, Percent_Identity=31.981981981982, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI71987621, Length=222, Percent_Identity=31.981981981982, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI71989955, Length=114, Percent_Identity=41.2280701754386, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI71989948, Length=114, Percent_Identity=41.2280701754386, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17570459, Length=224, Percent_Identity=31.6964285714286, Blast_Score=99, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI71989963, Length=79, Percent_Identity=37.9746835443038, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI45550506, Length=308, Percent_Identity=33.7662337662338, Blast_Score=172, Evalue=3e-43,
Organism=Drosophila melanogaster, GI45556022, Length=220, Percent_Identity=33.1818181818182, Blast_Score=116, Evalue=2e-26,
Organism=Drosophila melanogaster, GI18860517, Length=219, Percent_Identity=33.7899543378995, Blast_Score=113, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24657857, Length=222, Percent_Identity=31.981981981982, Blast_Score=110, Evalue=9e-25,
Organism=Drosophila melanogaster, GI21356845, Length=220, Percent_Identity=27.2727272727273, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI281365664, Length=222, Percent_Identity=31.981981981982, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI62484448, Length=222, Percent_Identity=31.981981981982, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI62484274, Length=222, Percent_Identity=31.981981981982, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI281361631, Length=221, Percent_Identity=28.9592760180996, Blast_Score=108, Evalue=4e-24,
Organism=Drosophila melanogaster, GI281361633, Length=221, Percent_Identity=28.9592760180996, Blast_Score=108, Evalue=4e-24,
Organism=Drosophila melanogaster, GI28573263, Length=234, Percent_Identity=27.3504273504274, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI281361635, Length=136, Percent_Identity=32.3529411764706, Blast_Score=91, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 36634; Mature: 36503

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: PS01270 BAND_7

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALLVILGVIALFVIILIVKGIVIIPQAETMVIERLGRFNRVLDSGVNVIIPIIERPQTI
CHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
DWKYIDEDRKGNKIVLRRKISRIDLRETVYDFPKQNVITKDNVAIEINAMLYFQITDPKK
CCEECCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCEECCCEEEEEEEEEEEEECCCHH
AVYEINNLPNAIEKLTQTTLRNVIGELELDETLASRDKINSKLKSILDEATDKWGVKVNR
HHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
VELQDIAPPEDIKEAMEKQMRAERDKRAAILKAEGKKKSAILEAEGKKEAEINEAEGKKM
EECCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEECCCCCCCCCCHHHHHHH
ARILEAEGEQEARIKVAQAEAKAIKTIAASVKDAGGDPTQYLIAIRYIETLREMVEGKDN
HHHHHCCCCHHHHEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC
KVIYLPYEATGILGSVGSIKELFQEG
EEEEEECCHHHHHCCHHHHHHHHHCC
>Mature Secondary Structure 
ALLVILGVIALFVIILIVKGIVIIPQAETMVIERLGRFNRVLDSGVNVIIPIIERPQTI
HHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
DWKYIDEDRKGNKIVLRRKISRIDLRETVYDFPKQNVITKDNVAIEINAMLYFQITDPKK
CCEECCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCEECCCEEEEEEEEEEEEECCCHH
AVYEINNLPNAIEKLTQTTLRNVIGELELDETLASRDKINSKLKSILDEATDKWGVKVNR
HHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
VELQDIAPPEDIKEAMEKQMRAERDKRAAILKAEGKKKSAILEAEGKKEAEINEAEGKKM
EECCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEECCCCCCCCCCHHHHHHH
ARILEAEGEQEARIKVAQAEAKAIKTIAASVKDAGGDPTQYLIAIRYIETLREMVEGKDN
HHHHHCCCCHHHHEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC
KVIYLPYEATGILGSVGSIKELFQEG
EEEEEECCHHHHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]