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The map label for this gene is 220932236

Identifier: 220932236

GI number: 220932236

Start: 1489608

End: 1490372

Strand: Reverse

Name: 220932236

Synonym: Hore_14000

Alternate gene names: NA

Gene position: 1490372-1489608 (Counterclockwise)

Preceding gene: 220932237

Following gene: 220932235

Centisome position: 57.81

GC content: 30.59

Gene sequence:

>765_bases
ATGGAGATAGGTATCGGATGTAGTCTAGAGGAGTTGAACAATAATAAAGATTTTGCAAAGTTTAAAGTAATAAATATTGA
AAATCCTCTATATCCAGGTTATCTGGAAAAAGCTACAGAAAAGGATATTAAATCAATTAATAAAATGACTAAATACAGAT
ACATAGTTGACGGTGCATATATTGATTTGAATCCTGGAACCAGTGAGCCAAAGATTAAAGATATAACTATGCAGAAAGTT
ATTGAGTCAATTAATTTTGCCCAGGAAATAGGTGCAGAGGAAGTTATTTTTTTATCAACTTTCTTACCTTTTATAAAAGT
GGATTTTTACGAAAAGGGATGGATCGAAGCCTCAAAAAAGTTCTGGGAAGAAGTATTAAATAAATATAAAGATATAAGAA
TATCGTTATGTAATACTTTTGAATTTAATCCTGATTATTTAATAGAAATAGTAGATTATGTTGATAAGGGGAATTTTGGT
CTTGCCTTTGACATTGGCCATGCTATTTTGTGGGGGCAGGAATCATTGGTAAGCTGGTTTGATAAGATTAAAAGGTATAT
CAAGACAATTTATCTCCATAGTAATGATGGTGAAGGGGATTTGCATCTTAGTTTTAGGCAGGGCAAACTTCAGGAAAAAG
AAATTAAGTTCGAAGAGTTATTGCAGCAATTAAAAGGAGAAAAATATAATCTTATACTAAAATACTTTGATAAGAGTAGT
GTTATAGCTGATAAAATTGAACTGGAGAAATTACTTGGGTCATAA

Upstream 100 bases:

>100_bases
TTTAAAAAGGTTCAGACCAGGACTTTTATACGGCCATAGGGTTTGTTAATAAATATAAAATTAACATCTGGGAAAAAAGA
TTCTAAGAGGTGTCAAAGTA

Downstream 100 bases:

>100_bases
AATATTCAGGATATTAGATAAGAGGATGTTAGAAATGAAAAAATTAATTATTATCAACGGTACGATGGGGGTTGGAAAAA
CAACAATTTGTCAGAGGTTA

Product: xylose isomerase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MEIGIGCSLEELNNNKDFAKFKVINIENPLYPGYLEKATEKDIKSINKMTKYRYIVDGAYIDLNPGTSEPKIKDITMQKV
IESINFAQEIGAEEVIFLSTFLPFIKVDFYEKGWIEASKKFWEEVLNKYKDIRISLCNTFEFNPDYLIEIVDYVDKGNFG
LAFDIGHAILWGQESLVSWFDKIKRYIKTIYLHSNDGEGDLHLSFRQGKLQEKEIKFEELLQQLKGEKYNLILKYFDKSS
VIADKIELEKLLGS

Sequences:

>Translated_254_residues
MEIGIGCSLEELNNNKDFAKFKVINIENPLYPGYLEKATEKDIKSINKMTKYRYIVDGAYIDLNPGTSEPKIKDITMQKV
IESINFAQEIGAEEVIFLSTFLPFIKVDFYEKGWIEASKKFWEEVLNKYKDIRISLCNTFEFNPDYLIEIVDYVDKGNFG
LAFDIGHAILWGQESLVSWFDKIKRYIKTIYLHSNDGEGDLHLSFRQGKLQEKEIKFEELLQQLKGEKYNLILKYFDKSS
VIADKIELEKLLGS
>Mature_254_residues
MEIGIGCSLEELNNNKDFAKFKVINIENPLYPGYLEKATEKDIKSINKMTKYRYIVDGAYIDLNPGTSEPKIKDITMQKV
IESINFAQEIGAEEVIFLSTFLPFIKVDFYEKGWIEASKKFWEEVLNKYKDIRISLCNTFEFNPDYLIEIVDYVDKGNFG
LAFDIGHAILWGQESLVSWFDKIKRYIKTIYLHSNDGEGDLHLSFRQGKLQEKEIKFEELLQQLKGEKYNLILKYFDKSS
VIADKIELEKLLGS

Specific function: Unknown

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ1614 and MJ0008 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: NA

Molecular weight: Translated: 29577; Mature: 29577

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIGIGCSLEELNNNKDFAKFKVINIENPLYPGYLEKATEKDIKSINKMTKYRYIVDGAY
CCCCCCCCHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECEE
IDLNPGTSEPKIKDITMQKVIESINFAQEIGAEEVIFLSTFLPFIKVDFYEKGWIEASKK
EECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEECCCCCHHHHHHH
FWEEVLNKYKDIRISLCNTFEFNPDYLIEIVDYVDKGNFGLAFDIGHAILWGQESLVSWF
HHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCEEEECHHHHHHHH
DKIKRYIKTIYLHSNDGEGDLHLSFRQGKLQEKEIKFEELLQQLKGEKYNLILKYFDKSS
HHHHHHHHEEEEECCCCCCEEEEEECCCCCCHHCCCHHHHHHHHCCCCEEEEEEEECCCC
VIADKIELEKLLGS
HHHHHHHHHHHHCC
>Mature Secondary Structure
MEIGIGCSLEELNNNKDFAKFKVINIENPLYPGYLEKATEKDIKSINKMTKYRYIVDGAY
CCCCCCCCHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECEE
IDLNPGTSEPKIKDITMQKVIESINFAQEIGAEEVIFLSTFLPFIKVDFYEKGWIEASKK
EECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEECCCCCHHHHHHH
FWEEVLNKYKDIRISLCNTFEFNPDYLIEIVDYVDKGNFGLAFDIGHAILWGQESLVSWF
HHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCEEEECHHHHHHHH
DKIKRYIKTIYLHSNDGEGDLHLSFRQGKLQEKEIKFEELLQQLKGEKYNLILKYFDKSS
HHHHHHHHEEEEECCCCCCEEEEEECCCCCCHHCCCHHHHHHHHCCCCEEEEEEEECCCC
VIADKIELEKLLGS
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]