| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
Click here to switch to the map view.
The map label for this gene is 220932235
Identifier: 220932235
GI number: 220932235
Start: 1489076
End: 1489618
Strand: Reverse
Name: 220932235
Synonym: Hore_13990
Alternate gene names: NA
Gene position: 1489618-1489076 (Counterclockwise)
Preceding gene: 220932236
Following gene: 220932234
Centisome position: 57.78
GC content: 29.1
Gene sequence:
>543_bases TTGGGTCATAAAATATTCAGGATATTAGATAAGAGGATGTTAGAAATGAAAAAATTAATTATTATCAACGGTACGATGGG GGTTGGAAAAACAACAATTTGTCAGAGGTTATACAAAAGTCTTAACTATAGTGTCTGGCTTGATGGTGATTGGTGCTGGA TGATGAACCCCTTTTGTGCTACAGAAGAAAATAAAAGAATGGTAGAAGACAATATTACATATCTTTTAAATAATTTTTTA GCGAATTCCTCTTTAAAATATATCATATTTAATTGGGTTATTCATCATGAAGATATATTTAATTTGATTCTAGATAAACT TCAAAAACACCAATATGAACTTTATAAAATCTCTTTAATTTGTTCTGAAAGAGAATTAAAAAGAAGAATGTTAGAAGATG GCCGTGACGAGGAGACTATCAAAGTGAGTTTAGCAAGGCTTAAACTTTATGAGAAAATGGACACAATAAAAATTGATACA ACAAATAATACTGTAGAAGAATCAGTAAATGAAATTATAAAGATTCTAGAGGGAGGGCATTAA
Upstream 100 bases:
>100_bases GAGTTATTGCAGCAATTAAAAGGAGAAAAATATAATCTTATACTAAAATACTTTGATAAGAGTAGTGTTATAGCTGATAA AATTGAACTGGAGAAATTAC
Downstream 100 bases:
>100_bases GATGAAGTCATTAAAAGTTGCTTTGCTGCAGATTGATGCCTGTGGAAATAACCAGAAAAAAAACATGGAAAAAAGGAGAA AGGGCTTGCCGAAAGGCAAG
Product: putative nucleotide kinase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MGHKIFRILDKRMLEMKKLIIINGTMGVGKTTICQRLYKSLNYSVWLDGDWCWMMNPFCATEENKRMVEDNITYLLNNFL ANSSLKYIIFNWVIHHEDIFNLILDKLQKHQYELYKISLICSERELKRRMLEDGRDEETIKVSLARLKLYEKMDTIKIDT TNNTVEESVNEIIKILEGGH
Sequences:
>Translated_180_residues MGHKIFRILDKRMLEMKKLIIINGTMGVGKTTICQRLYKSLNYSVWLDGDWCWMMNPFCATEENKRMVEDNITYLLNNFL ANSSLKYIIFNWVIHHEDIFNLILDKLQKHQYELYKISLICSERELKRRMLEDGRDEETIKVSLARLKLYEKMDTIKIDT TNNTVEESVNEIIKILEGGH >Mature_179_residues GHKIFRILDKRMLEMKKLIIINGTMGVGKTTICQRLYKSLNYSVWLDGDWCWMMNPFCATEENKRMVEDNITYLLNNFLA NSSLKYIIFNWVIHHEDIFNLILDKLQKHQYELYKISLICSERELKRRMLEDGRDEETIKVSLARLKLYEKMDTIKIDTT NNTVEESVNEIIKILEGGH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21397; Mature: 21266
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGHKIFRILDKRMLEMKKLIIINGTMGVGKTTICQRLYKSLNYSVWLDGDWCWMMNPFCA CCHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHCCCEEEECCCEEEECCCCCC TEENKRMVEDNITYLLNNFLANSSLKYIIFNWVIHHEDIFNLILDKLQKHQYELYKISLI CCCCCHHHHHHHHHHHHHHHCCCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHEEEEEE CSERELKRRMLEDGRDEETIKVSLARLKLYEKMDTIKIDTTNNTVEESVNEIIKILEGGH ECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure GHKIFRILDKRMLEMKKLIIINGTMGVGKTTICQRLYKSLNYSVWLDGDWCWMMNPFCA CHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHCCCEEEECCCEEEECCCCCC TEENKRMVEDNITYLLNNFLANSSLKYIIFNWVIHHEDIFNLILDKLQKHQYELYKISLI CCCCCHHHHHHHHHHHHHHHCCCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHEEEEEE CSERELKRRMLEDGRDEETIKVSLARLKLYEKMDTIKIDTTNNTVEESVNEIIKILEGGH ECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA